RNA–Protein interactions for RNA: ENST00000550075.5

CPSF6-205, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 540 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-205ENST00000550075 TFRCP02786 760 aaKnown RBP30.17■■■□□ 2.42
CPSF6-205ENST00000550075 CYBAP13498 195 aa30.17■■■□□ 2.42
CPSF6-205ENST00000550075 CCND3P30281 292 aaPredicted RBP30.17■■■□□ 2.42
CPSF6-205ENST00000550075 GNAQP50148 359 aa30.17■■■□□ 2.42
CPSF6-205ENST00000550075 FGD1P98174 961 aa30.17■■■□□ 2.42
CPSF6-205ENST00000550075 EXOSC10Q01780 885 aaKnown RBP30.17■■■□□ 2.42
CPSF6-205ENST00000550075 TRAF1Q13077 416 aa30.17■■■□□ 2.42
CPSF6-205ENST00000550075 COL9A3Q14050 684 aaPredicted RBP30.17■■■□□ 2.42
CPSF6-205ENST00000550075 QRICH1Q2TAL8 776 aa30.17■■■□□ 2.42
CPSF6-205ENST00000550075 USH1GQ495M9 461 aa30.17■■■□□ 2.42
CPSF6-205ENST00000550075 BLOC1S2Q6QNY1 142 aa30.17■■■□□ 2.42
CPSF6-205ENST00000550075 FBXO11Q86XK2 927 aa30.17■■■□□ 2.42
CPSF6-205ENST00000550075 ABCB11O95342 1321 aa30.17■■■□□ 2.42
CPSF6-205ENST00000550075 SYNGAP1Q96PV0 1343 aa30.17■■■□□ 2.42
CPSF6-205ENST00000550075 CNGA1P29973 690 aa30.16■■■□□ 2.42
CPSF6-205ENST00000550075 LZTS2Q9BRK4 669 aa30.16■■■□□ 2.42
CPSF6-205ENST00000550075 USP26Q9BXU7 913 aa30.16■■■□□ 2.42
CPSF6-205ENST00000550075 CRISPLD2Q9H0B8 497 aa30.16■■■□□ 2.42
CPSF6-205ENST00000550075 CYP39A1Q9NYL5 469 aa30.16■■■□□ 2.42
CPSF6-205ENST00000550075 CNPY2Q9Y2B0 182 aa30.16■■■□□ 2.42
CPSF6-205ENST00000550075 SMCHD1A6NHR9 2005 aa30.16■■■□□ 2.42
CPSF6-205ENST00000550075 TAL1P17542 331 aaPredicted RBP30.15■■■□□ 2.42
CPSF6-205ENST00000550075 FAM133AQ8N9E0 248 aa30.15■■■□□ 2.42
CPSF6-205ENST00000550075 MYL10Q9BUA6 226 aa30.15■■■□□ 2.42
CPSF6-205ENST00000550075 MAF1Q9H063 256 aa30.15■■■□□ 2.42
CPSF6-205ENST00000550075 NFIBO00712 420 aa30.14■■■□□ 2.42
CPSF6-205ENST00000550075 ZBTB5O15062 677 aa30.14■■■□□ 2.42
CPSF6-205ENST00000550075 MAMDC4Q6UXC1 1216 aa30.14■■■□□ 2.42
CPSF6-205ENST00000550075 AMNQ9BXJ7 453 aa30.14■■■□□ 2.42
CPSF6-205ENST00000550075 RIOX1Q9H6W3 641 aa30.14■■■□□ 2.42
CPSF6-205ENST00000550075 FRMPD3Q5JV73 1810 aa30.13■■■□□ 2.41
CPSF6-205ENST00000550075 PTPDC1A2A3K4 754 aa30.13■■■□□ 2.41
CPSF6-205ENST00000550075 HOMER1Q86YM7 354 aa30.13■■■□□ 2.41
CPSF6-205ENST00000550075 ANKLE1Q8NAG6 615 aa30.13■■■□□ 2.41
CPSF6-205ENST00000550075 MTMR8Q96EF0 704 aa30.13■■■□□ 2.41
CPSF6-205ENST00000550075 TCEANC2Q96MN5 208 aa30.13■■■□□ 2.41
CPSF6-205ENST00000550075 DDX20Q9UHI6 824 aaKnown RBP30.13■■■□□ 2.41
CPSF6-205ENST00000550075 MRPL11Q9Y3B7 192 aaKnown RBP30.13■■■□□ 2.41
CPSF6-205ENST00000550075 FARP2O94887 1054 aaPredicted RBP30.12■■■□□ 2.41
CPSF6-205ENST00000550075 CNTN2Q02246 1040 aa30.12■■■□□ 2.41
CPSF6-205ENST00000550075 APOA5Q6Q788 366 aa30.12■■■□□ 2.41
CPSF6-205ENST00000550075 RNF207Q6ZRF8 634 aa30.12■■■□□ 2.41
CPSF6-205ENST00000550075 MICU3Q86XE3 530 aa30.12■■■□□ 2.41
CPSF6-205ENST00000550075 CLEC4DQ8WXI8 215 aa30.12■■■□□ 2.41
CPSF6-205ENST00000550075 SPZ1Q9BXG8 430 aa30.12■■■□□ 2.41
CPSF6-205ENST00000550075 ADD3Q9UEY8 706 aaKnown RBP30.12■■■□□ 2.41
CPSF6-205ENST00000550075 BRCA2P51587 3418 aa30.12■■■□□ 2.41
CPSF6-205ENST00000550075 ASB14A6NK59 587 aa30.11■■■□□ 2.41
CPSF6-205ENST00000550075 SEPT4O43236 478 aa30.11■■■□□ 2.41
CPSF6-205ENST00000550075 CASTP20810 708 aaKnown RBP30.11■■■□□ 2.41
CPSF6-205ENST00000550075 RPS6KB1P23443 525 aa30.11■■■□□ 2.41
CPSF6-205ENST00000550075 SMARCA1P28370 1054 aa30.11■■■□□ 2.41
CPSF6-205ENST00000550075 MCF2L2Q86YR7 1114 aa30.11■■■□□ 2.41
CPSF6-205ENST00000550075 TRPV1Q8NER1 839 aa30.11■■■□□ 2.41
CPSF6-205ENST00000550075 BAATQ14032 418 aaPredicted RBP30.1■■■□□ 2.41
CPSF6-205ENST00000550075 RGS22Q8NE09 1264 aa30.1■■■□□ 2.41
CPSF6-205ENST00000550075 FGD4Q96M96 766 aa30.1■■■□□ 2.41
CPSF6-205ENST00000550075 PIGSQ96S52 555 aa30.1■■■□□ 2.41
CPSF6-205ENST00000550075 OGDHLQ9ULD0 1010 aa30.1■■■□□ 2.41
CPSF6-205ENST00000550075 ZBTB43O43298 467 aa30.09■■■□□ 2.41
CPSF6-205ENST00000550075 MCM3APO60318 1980 aa30.09■■■□□ 2.41
CPSF6-205ENST00000550075 RXRAP19793 462 aa30.09■■■□□ 2.41
CPSF6-205ENST00000550075 RCAN1P53805 252 aa30.09■■■□□ 2.41
CPSF6-205ENST00000550075 ARMCX2Q7L311 632 aa30.09■■■□□ 2.41
CPSF6-205ENST00000550075 RRP36Q96EU6 259 aaKnown RBP30.09■■■□□ 2.41
CPSF6-205ENST00000550075 MPHOSPH6Q99547 160 aaKnown RBP30.09■■■□□ 2.41
CPSF6-205ENST00000550075 RBM28Q9NW13 759 aaKnown RBP30.09■■■□□ 2.41
CPSF6-205ENST00000550075 CDKN2AIPQ9NXV6 580 aaPredicted RBP30.09■■■□□ 2.41
CPSF6-205ENST00000550075 SEC63Q9UGP8 760 aaKnown RBP30.09■■■□□ 2.41
CPSF6-205ENST00000550075 BAZ2BQ9UIF8 2168 aaKnown RBP30.09■■■□□ 2.41
CPSF6-205ENST00000550075 LCTP09848 1927 aa30.08■■■□□ 2.41
CPSF6-205ENST00000550075 LOC102724159A0A0B4J2E5 919 aa30.08■■■□□ 2.41
CPSF6-205ENST00000550075 PNMA6FA0A0J9YX94 578 aa30.08■■■□□ 2.41
CPSF6-205ENST00000550075 KLF18A0A0U1RQI7 1052 aa30.08■■■□□ 2.41
CPSF6-205ENST00000550075 CALML3P27482 149 aa30.08■■■□□ 2.41
CPSF6-205ENST00000550075 PWP2Q15269 919 aaKnown RBP30.08■■■□□ 2.41
CPSF6-205ENST00000550075 PRAMEF19Q5SWL8 479 aa30.08■■■□□ 2.41
CPSF6-205ENST00000550075 SLC30A10Q6XR72 485 aa30.08■■■□□ 2.41
CPSF6-205ENST00000550075 CCDC144CPQ8IYA2 1237 aa30.08■■■□□ 2.41
CPSF6-205ENST00000550075 FANCBQ8NB91 859 aa30.08■■■□□ 2.41
CPSF6-205ENST00000550075 ABHD16BQ9H3Z7 469 aa30.08■■■□□ 2.41
CPSF6-205ENST00000550075 ZHX1Q9UKY1 873 aaPredicted RBP30.08■■■□□ 2.41
CPSF6-205ENST00000550075 PCDHA1Q9Y5I3 950 aa30.08■■■□□ 2.41
CPSF6-205ENST00000550075 SOWAHBA6NEL2 793 aa30.07■■■□□ 2.4
CPSF6-205ENST00000550075 CYTH3O43739 400 aa30.07■■■□□ 2.4
CPSF6-205ENST00000550075 CPA1P15085 419 aa30.07■■■□□ 2.4
CPSF6-205ENST00000550075 RPS6P62753 249 aaKnown RBP30.07■■■□□ 2.4
CPSF6-205ENST00000550075 SLC35G1Q2M3R5 365 aa30.07■■■□□ 2.4
CPSF6-205ENST00000550075 LHX8Q68G74 356 aa30.07■■■□□ 2.4
CPSF6-205ENST00000550075 Q6ZUG5 572 aa30.07■■■□□ 2.4
CPSF6-205ENST00000550075 TM6SF1Q9BZW5 370 aa30.07■■■□□ 2.4
CPSF6-205ENST00000550075 NAP1L2Q9ULW6 460 aaPredicted RBP30.07■■■□□ 2.4
CPSF6-205ENST00000550075 PLEKHA8P1O95397 391 aa30.06■■■□□ 2.4
CPSF6-205ENST00000550075 SNAI1O95863 264 aaPredicted RBP30.06■■■□□ 2.4
CPSF6-205ENST00000550075 AKR1A1P14550 325 aa30.06■■■□□ 2.4
CPSF6-205ENST00000550075 RTN1Q16799 776 aa30.06■■■□□ 2.4
CPSF6-205ENST00000550075 RAB11FIP4Q86YS3 637 aa30.06■■■□□ 2.4
CPSF6-205ENST00000550075 CYP46A1Q9Y6A2 500 aa30.06■■■□□ 2.4
CPSF6-205ENST00000550075 GOLGA8AA7E2F4 631 aa30.05■■■□□ 2.4
CPSF6-205ENST00000550075 GOLGA8BA8MQT2 603 aa30.05■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms