RNA–Protein interactions for RNA: ENST00000550051.5

TRAFD1-207, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene TRAFD1, Length 1,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-207ENST00000550051 ACAD9Q9H845 621 aa11.73□□□□□ -0.53
TRAFD1-207ENST00000550051 EPB41L4AQ9HCS5 686 aaPredicted RBP11.73□□□□□ -0.53
TRAFD1-207ENST00000550051 MSRAQ9UJ68 235 aa11.73□□□□□ -0.53
TRAFD1-207ENST00000550051 PLIN4Q96Q06 1357 aa11.72□□□□□ -0.53
TRAFD1-207ENST00000550051 GRIN2DO15399 1336 aa11.72□□□□□ -0.53
TRAFD1-207ENST00000550051 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.72□□□□□ -0.53
TRAFD1-207ENST00000550051 TMEM232C9JQI7 657 aa11.72□□□□□ -0.53
TRAFD1-207ENST00000550051 PRDM1O75626 825 aa11.72□□□□□ -0.53
TRAFD1-207ENST00000550051 APPP05067 770 aa11.72□□□□□ -0.53
TRAFD1-207ENST00000550051 CYP2C18P33260 490 aa11.72□□□□□ -0.53
TRAFD1-207ENST00000550051 TDO2P48775 406 aa11.72□□□□□ -0.53
TRAFD1-207ENST00000550051 STAT2P52630 851 aa11.72□□□□□ -0.53
TRAFD1-207ENST00000550051 BEX3Q00994 111 aa11.72□□□□□ -0.53
TRAFD1-207ENST00000550051 PDE4BQ07343 736 aa11.72□□□□□ -0.53
TRAFD1-207ENST00000550051 ITGA7Q13683 1181 aa11.72□□□□□ -0.53
TRAFD1-207ENST00000550051 LRRFIP1Q32MZ4 808 aaKnown RBP11.72□□□□□ -0.53
TRAFD1-207ENST00000550051 PPP4R3BQ5MIZ7 849 aa11.72□□□□□ -0.53
TRAFD1-207ENST00000550051 CXCL17Q6UXB2 119 aa11.72□□□□□ -0.53
TRAFD1-207ENST00000550051 ASB2Q96Q27 587 aa11.72□□□□□ -0.53
TRAFD1-207ENST00000550051 NACAP1Q9BZK3 213 aa11.72□□□□□ -0.53
TRAFD1-207ENST00000550051 PPP1R12CQ9BZL4 782 aa11.72□□□□□ -0.53
TRAFD1-207ENST00000550051 AP5M1Q9H0R1 490 aa11.72□□□□□ -0.53
TRAFD1-207ENST00000550051 MTIF3Q9H2K0 278 aaKnown RBP11.72□□□□□ -0.53
TRAFD1-207ENST00000550051 PRDM12Q9H4Q4 367 aa11.72□□□□□ -0.53
TRAFD1-207ENST00000550051 A1CFQ9NQ94 594 aaKnown RBP11.72□□□□□ -0.53
TRAFD1-207ENST00000550051 CIZ1Q9ULV3 898 aaPredicted RBP11.72□□□□□ -0.53
TRAFD1-207ENST00000550051 TTC28Q96AY4 2481 aa11.71□□□□□ -0.53
TRAFD1-207ENST00000550051 ZEB2O60315 1214 aa11.71□□□□□ -0.53
TRAFD1-207ENST00000550051 SLC3A2P08195 630 aaKnown RBP11.71□□□□□ -0.53
TRAFD1-207ENST00000550051 TSPY3P0CV98 308 aa11.71□□□□□ -0.53
TRAFD1-207ENST00000550051 TSPY8P0CW00 308 aa11.71□□□□□ -0.53
TRAFD1-207ENST00000550051 TFAP4Q01664 338 aa11.71□□□□□ -0.53
TRAFD1-207ENST00000550051 ADGRE1Q14246 886 aa11.71□□□□□ -0.53
TRAFD1-207ENST00000550051 FSCN1Q16658 493 aaKnown RBP11.71□□□□□ -0.53
TRAFD1-207ENST00000550051 RCSD1Q6JBY9 416 aa11.71□□□□□ -0.53
TRAFD1-207ENST00000550051 TAPT1Q6NXT6 567 aa11.71□□□□□ -0.53
TRAFD1-207ENST00000550051 RPUSD2Q8IZ73 545 aaKnown RBP11.71□□□□□ -0.53
TRAFD1-207ENST00000550051 LRRC47Q8N1G4 583 aaKnown RBP11.71□□□□□ -0.53
TRAFD1-207ENST00000550051 MORC4Q8TE76 937 aa11.71□□□□□ -0.53
TRAFD1-207ENST00000550051 GPATCH3Q96I76 525 aa11.71□□□□□ -0.53
TRAFD1-207ENST00000550051 AGBL1Q96MI9 1066 aa11.71□□□□□ -0.53
TRAFD1-207ENST00000550051 TRERF1Q96PN7 1200 aa11.71□□□□□ -0.53
TRAFD1-207ENST00000550051 HIPK3Q9H422 1215 aa11.71□□□□□ -0.53
TRAFD1-207ENST00000550051 CXXC1Q9P0U4 656 aaPredicted RBP11.71□□□□□ -0.53
TRAFD1-207ENST00000550051 MUC3AQ02505 3323 aa11.71□□□□□ -0.54
TRAFD1-207ENST00000550051 GBF1Q92538 1859 aa11.7□□□□□ -0.54
TRAFD1-207ENST00000550051 M0R2C6 588 aa11.7□□□□□ -0.54
TRAFD1-207ENST00000550051 DYNC1LI2O43237 492 aaPredicted RBP11.7□□□□□ -0.54
TRAFD1-207ENST00000550051 SMPD1P17405 629 aa11.7□□□□□ -0.54
TRAFD1-207ENST00000550051 MCCP23508 829 aa11.7□□□□□ -0.54
TRAFD1-207ENST00000550051 SLC1A4P43007 532 aa11.7□□□□□ -0.54
TRAFD1-207ENST00000550051 NOVP48745 357 aa11.7□□□□□ -0.54
TRAFD1-207ENST00000550051 MRPS5P82675 430 aaKnown RBP11.7□□□□□ -0.54
TRAFD1-207ENST00000550051 NOL8Q76FK4 1167 aaKnown RBP11.7□□□□□ -0.54
TRAFD1-207ENST00000550051 TLK2Q86UE8 772 aa11.7□□□□□ -0.54
TRAFD1-207ENST00000550051 NOC4LQ9BVI4 516 aaKnown RBP11.7□□□□□ -0.54
TRAFD1-207ENST00000550051 SLC28A3Q9HAS3 691 aa11.7□□□□□ -0.54
TRAFD1-207ENST00000550051 HOMER2Q9NSB8 354 aa11.7□□□□□ -0.54
TRAFD1-207ENST00000550051 RNF146Q9NTX7 359 aa11.7□□□□□ -0.54
TRAFD1-207ENST00000550051 CYP39A1Q9NYL5 469 aa11.7□□□□□ -0.54
TRAFD1-207ENST00000550051 THEGQ9P2T0 379 aa11.7□□□□□ -0.54
TRAFD1-207ENST00000550051 RCAN3Q9UKA8 241 aa11.7□□□□□ -0.54
TRAFD1-207ENST00000550051 CHD9Q3L8U1 2897 aa11.69□□□□□ -0.54
TRAFD1-207ENST00000550051 LOC102724159A0A0B4J2E5 919 aa11.69□□□□□ -0.54
TRAFD1-207ENST00000550051 PWP2Q15269 919 aaKnown RBP11.69□□□□□ -0.54
TRAFD1-207ENST00000550051 OTOP2Q7RTS6 562 aa11.69□□□□□ -0.54
TRAFD1-207ENST00000550051 PPM1EQ8WY54 764 aa11.69□□□□□ -0.54
TRAFD1-207ENST00000550051 VWCEQ96DN2 955 aa11.69□□□□□ -0.54
TRAFD1-207ENST00000550051 TRPV6Q9H1D0 765 aa11.69□□□□□ -0.54
TRAFD1-207ENST00000550051 VTA1Q9NP79 307 aa11.69□□□□□ -0.54
TRAFD1-207ENST00000550051 PDGFCQ9NRA1 345 aa11.69□□□□□ -0.54
TRAFD1-207ENST00000550051 IL17RBQ9NRM6 502 aa11.69□□□□□ -0.54
TRAFD1-207ENST00000550051 PRR12Q9ULL5 1215 aa11.69□□□□□ -0.54
TRAFD1-207ENST00000550051 TTC41PQ6P2S7 1318 aa11.68□□□□□ -0.54
TRAFD1-207ENST00000550051 B4GALT4O60513 344 aa11.68□□□□□ -0.54
TRAFD1-207ENST00000550051 SUPT20HL2P0C7V6 817 aa11.68□□□□□ -0.54
TRAFD1-207ENST00000550051 ALAS1P13196 640 aa11.68□□□□□ -0.54
TRAFD1-207ENST00000550051 POU3F3P20264 500 aaPredicted RBP11.68□□□□□ -0.54
TRAFD1-207ENST00000550051 CCL23P55773 120 aa11.68□□□□□ -0.54
TRAFD1-207ENST00000550051 PPARAQ07869 468 aa11.68□□□□□ -0.54
TRAFD1-207ENST00000550051 MUM1L1Q5H9M0 696 aa11.68□□□□□ -0.54
TRAFD1-207ENST00000550051 ZMYM1Q5SVZ6 1142 aa11.68□□□□□ -0.54
TRAFD1-207ENST00000550051 C20orf194Q5TEA3 1177 aa11.68□□□□□ -0.54
TRAFD1-207ENST00000550051 SEC62Q99442 399 aaKnown RBP11.68□□□□□ -0.54
TRAFD1-207ENST00000550051 NAPBQ9H115 298 aa11.68□□□□□ -0.54
TRAFD1-207ENST00000550051 WNT8AQ9H1J5 351 aa11.68□□□□□ -0.54
TRAFD1-207ENST00000550051 NKX2-4Q9H2Z4 354 aa11.68□□□□□ -0.54
TRAFD1-207ENST00000550051 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.68□□□□□ -0.54
TRAFD1-207ENST00000550051 YBX2Q9Y2T7 364 aaKnown RBP11.68□□□□□ -0.54
TRAFD1-207ENST00000550051 PCDHA11Q9Y5I1 949 aa11.68□□□□□ -0.54
TRAFD1-207ENST00000550051 SLC4A7Q9Y6M7 1214 aa11.68□□□□□ -0.54
TRAFD1-207ENST00000550051 UMODL1Q5DID0 1318 aa11.67□□□□□ -0.54
TRAFD1-207ENST00000550051 RBM47A0AV96 593 aaKnown RBP11.67□□□□□ -0.54
TRAFD1-207ENST00000550051 ICAM1P05362 532 aa11.67□□□□□ -0.54
TRAFD1-207ENST00000550051 PFKMP08237 780 aa11.67□□□□□ -0.54
TRAFD1-207ENST00000550051 COL9A1P20849 921 aa11.67□□□□□ -0.54
TRAFD1-207ENST00000550051 IGFBP4P22692 258 aa11.67□□□□□ -0.54
TRAFD1-207ENST00000550051 IKQ13123 557 aaPredicted RBP11.67□□□□□ -0.54
TRAFD1-207ENST00000550051 CCDC85BQ15834 202 aaPredicted RBP11.67□□□□□ -0.54
TRAFD1-207ENST00000550051 DUSP28Q4G0W2 176 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms