RNA–Protein interactions for RNA: ENST00000549752.1

CCDC38-207, Transcript of coiled-coil domain containing 38, humanhuman

TSL 3

Gene CCDC38, Length 476 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-207ENST00000549752 ICAM1P05362 532 aa12.24□□□□□ -0.45
CCDC38-207ENST00000549752 ALAS1P13196 640 aa12.24□□□□□ -0.45
CCDC38-207ENST00000549752 BMP8BP34820 402 aa12.24□□□□□ -0.45
CCDC38-207ENST00000549752 RANBP2P49792 3224 aaKnown RBP12.24□□□□□ -0.45
CCDC38-207ENST00000549752 IRX6P78412 446 aaPredicted RBP12.24□□□□□ -0.45
CCDC38-207ENST00000549752 TRDNQ13061 729 aa12.24□□□□□ -0.45
CCDC38-207ENST00000549752 LTBP2Q14767 1821 aa12.24□□□□□ -0.45
CCDC38-207ENST00000549752 PRAMEF19Q5SWL8 479 aa12.24□□□□□ -0.45
CCDC38-207ENST00000549752 GJC2Q5T442 439 aaPredicted RBP12.24□□□□□ -0.45
CCDC38-207ENST00000549752 SYDE2Q5VT97 1194 aa12.24□□□□□ -0.45
CCDC38-207ENST00000549752 CCDC174Q6PII3 467 aa12.24□□□□□ -0.45
CCDC38-207ENST00000549752 TBC1D10CQ8IV04 446 aa12.24□□□□□ -0.45
CCDC38-207ENST00000549752 MPHOSPH6Q99547 160 aaKnown RBP12.24□□□□□ -0.45
CCDC38-207ENST00000549752 RANBP17Q9H2T7 1088 aaKnown RBP12.24□□□□□ -0.45
CCDC38-207ENST00000549752 KAT14Q9H8E8 782 aa12.24□□□□□ -0.45
CCDC38-207ENST00000549752 PCDH10Q9P2E7 1040 aa12.24□□□□□ -0.45
CCDC38-207ENST00000549752 RBM27Q9P2N5 1060 aaKnown RBP12.24□□□□□ -0.45
CCDC38-207ENST00000549752 DAXXQ9UER7 740 aaPredicted RBP12.24□□□□□ -0.45
CCDC38-207ENST00000549752 TACC3Q9Y6A5 838 aa12.24□□□□□ -0.45
CCDC38-207ENST00000549752 ZNF536O15090 1300 aa12.23□□□□□ -0.45
CCDC38-207ENST00000549752 LOC102724159A0A0B4J2E5 919 aa12.23□□□□□ -0.45
CCDC38-207ENST00000549752 KDM4AO75164 1064 aa12.23□□□□□ -0.45
CCDC38-207ENST00000549752 ZNF865P0CJ78 1059 aaPredicted RBP12.23□□□□□ -0.45
CCDC38-207ENST00000549752 PDHBP11177 359 aa12.23□□□□□ -0.45
CCDC38-207ENST00000549752 TIE1P35590 1138 aa12.23□□□□□ -0.45
CCDC38-207ENST00000549752 CAMK2BQ13554 666 aa12.23□□□□□ -0.45
CCDC38-207ENST00000549752 PWP2Q15269 919 aaKnown RBP12.23□□□□□ -0.45
CCDC38-207ENST00000549752 LRRC41Q15345 812 aa12.23□□□□□ -0.45
CCDC38-207ENST00000549752 LRRC26Q2I0M4 334 aa12.23□□□□□ -0.45
CCDC38-207ENST00000549752 ANO1Q5XXA6 986 aa12.23□□□□□ -0.45
CCDC38-207ENST00000549752 AGBL1Q96MI9 1066 aa12.23□□□□□ -0.45
CCDC38-207ENST00000549752 LBHD1Q9BQE6 289 aaPredicted RBP12.23□□□□□ -0.45
CCDC38-207ENST00000549752 UBAC1Q9BSL1 405 aa12.23□□□□□ -0.45
CCDC38-207ENST00000549752 TSEN34Q9BSV6 310 aaKnown RBP12.23□□□□□ -0.45
CCDC38-207ENST00000549752 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.23□□□□□ -0.45
CCDC38-207ENST00000549752 ZHX1Q9UKY1 873 aaPredicted RBP12.23□□□□□ -0.45
CCDC38-207ENST00000549752 ZMYND8Q9ULU4 1186 aaPredicted RBP12.23□□□□□ -0.45
CCDC38-207ENST00000549752 MYH7BA7E2Y1 1941 aa12.23□□□□□ -0.45
CCDC38-207ENST00000549752 BAZ2BQ9UIF8 2168 aaKnown RBP12.22□□□□□ -0.45
CCDC38-207ENST00000549752 NEDD4P46934 1319 aa12.22□□□□□ -0.45
CCDC38-207ENST00000549752 B4DLN1 442 aa12.22□□□□□ -0.45
CCDC38-207ENST00000549752 DUSP11O75319 330 aaKnown RBP12.22□□□□□ -0.45
CCDC38-207ENST00000549752 SNHG28P0DPA3 235 aa12.22□□□□□ -0.45
CCDC38-207ENST00000549752 GSPT1P15170 499 aaKnown RBP12.22□□□□□ -0.45
CCDC38-207ENST00000549752 FXR1P51114 621 aaKnown RBP eCLIP12.22□□□□□ -0.45
CCDC38-207ENST00000549752 MRPL12P52815 198 aaKnown RBP12.22□□□□□ -0.45
CCDC38-207ENST00000549752 ZNF543Q08ER8 600 aa12.22□□□□□ -0.45
CCDC38-207ENST00000549752 ACVR2BQ13705 512 aa12.22□□□□□ -0.45
CCDC38-207ENST00000549752 SLC39A5Q6ZMH5 540 aa12.22□□□□□ -0.45
CCDC38-207ENST00000549752 ARMCX2Q7L311 632 aa12.22□□□□□ -0.45
CCDC38-207ENST00000549752 FAM133AQ8N9E0 248 aa12.22□□□□□ -0.45
CCDC38-207ENST00000549752 PNMA1Q8ND90 353 aa12.22□□□□□ -0.45
CCDC38-207ENST00000549752 NUP133Q8WUM0 1156 aa12.22□□□□□ -0.45
CCDC38-207ENST00000549752 ANKS1AQ92625 1134 aa12.22□□□□□ -0.45
CCDC38-207ENST00000549752 CHMP4CQ96CF2 233 aa12.22□□□□□ -0.45
CCDC38-207ENST00000549752 ZSCAN10Q96SZ4 725 aaPredicted RBP12.22□□□□□ -0.45
CCDC38-207ENST00000549752 GDF15Q99988 308 aa12.22□□□□□ -0.45
CCDC38-207ENST00000549752 MAF1Q9H063 256 aa12.22□□□□□ -0.45
CCDC38-207ENST00000549752 PRO3102Q9H379 93 aa12.22□□□□□ -0.45
CCDC38-207ENST00000549752 GPCPD1Q9NPB8 672 aa12.22□□□□□ -0.45
CCDC38-207ENST00000549752 A1CFQ9NQ94 594 aaKnown RBP12.22□□□□□ -0.45
CCDC38-207ENST00000549752 ADD3Q9UEY8 706 aaKnown RBP12.22□□□□□ -0.45
CCDC38-207ENST00000549752 FRMPD2Q68DX3 1309 aaPredicted RBP12.21□□□□□ -0.45
CCDC38-207ENST00000549752 WDR19Q8NEZ3 1342 aa12.21□□□□□ -0.45
CCDC38-207ENST00000549752 MOXD2PA6NHM9 499 aa12.21□□□□□ -0.45
CCDC38-207ENST00000549752 B4E1Z4 1266 aa12.21□□□□□ -0.45
CCDC38-207ENST00000549752 SNAI1O95863 264 aaPredicted RBP12.21□□□□□ -0.45
CCDC38-207ENST00000549752 CHMLP26374 656 aa12.21□□□□□ -0.45
CCDC38-207ENST00000549752 SLC16A2P36021 539 aa12.21□□□□□ -0.45
CCDC38-207ENST00000549752 ATN1P54259 1190 aaPredicted RBP12.21□□□□□ -0.45
CCDC38-207ENST00000549752 ASPRV1Q53RT3 343 aa12.21□□□□□ -0.45
CCDC38-207ENST00000549752 C1orf53Q5VUE5 145 aa12.21□□□□□ -0.45
CCDC38-207ENST00000549752 CCDC144CPQ8IYA2 1237 aa12.21□□□□□ -0.45
CCDC38-207ENST00000549752 PCSK9Q8NBP7 692 aaKnown RBP12.21□□□□□ -0.45
CCDC38-207ENST00000549752 ZKSCAN3Q9BRR0 538 aa12.21□□□□□ -0.45
CCDC38-207ENST00000549752 ZSWIM5Q9P217 1185 aa12.21□□□□□ -0.45
CCDC38-207ENST00000549752 PHF24Q9UPV7 400 aa12.21□□□□□ -0.45
CCDC38-207ENST00000549752 TNKSO95271 1327 aa12.2□□□□□ -0.46
CCDC38-207ENST00000549752 ERICH2A1L162 156 aa12.2□□□□□ -0.46
CCDC38-207ENST00000549752 PGK1P00558 417 aa12.2□□□□□ -0.46
CCDC38-207ENST00000549752 TAL1P17542 331 aaPredicted RBP12.2□□□□□ -0.46
CCDC38-207ENST00000549752 SYN1P17600 705 aa12.2□□□□□ -0.46
CCDC38-207ENST00000549752 ADCYAP1R1P41586 468 aa12.2□□□□□ -0.46
CCDC38-207ENST00000549752 MAGEA10P43363 369 aaPredicted RBP12.2□□□□□ -0.46
CCDC38-207ENST00000549752 RTP1P59025 263 aa12.2□□□□□ -0.46
CCDC38-207ENST00000549752 CNTN2Q02246 1040 aa12.2□□□□□ -0.46
CCDC38-207ENST00000549752 SART3Q15020 963 aaKnown RBP12.2□□□□□ -0.46
CCDC38-207ENST00000549752 CCDC144BQ3MJ40 725 aa12.2□□□□□ -0.46
CCDC38-207ENST00000549752 IFIT1BQ5T764 474 aaKnown RBP12.2□□□□□ -0.46
CCDC38-207ENST00000549752 TTBK2Q6IQ55 1244 aa12.2□□□□□ -0.46
CCDC38-207ENST00000549752 NSMFQ6X4W1 530 aa12.2□□□□□ -0.46
CCDC38-207ENST00000549752 KIAA1211Q6ZU35 1233 aa12.2□□□□□ -0.46
CCDC38-207ENST00000549752 RALYLQ86SE5 291 aaKnown RBP12.2□□□□□ -0.46
CCDC38-207ENST00000549752 MS4A3Q96HJ5 214 aa12.2□□□□□ -0.46
CCDC38-207ENST00000549752 UBE2OQ9C0C9 1292 aaKnown RBP12.2□□□□□ -0.46
CCDC38-207ENST00000549752 CYP39A1Q9NYL5 469 aa12.2□□□□□ -0.46
CCDC38-207ENST00000549752 ATP11BQ9Y2G3 1177 aa12.2□□□□□ -0.46
CCDC38-207ENST00000549752 MROH7Q68CQ1 1323 aa12.19□□□□□ -0.46
CCDC38-207ENST00000549752 SYNRGQ9UMZ2 1314 aa12.19□□□□□ -0.46
CCDC38-207ENST00000549752 PARP1P09874 1014 aaKnown RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms