RNA–Protein interactions for RNA: ENST00000549358.5

TRAFD1-206, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 4

Gene TRAFD1, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-206ENST00000549358 ARNTL2Q8WYA1 636 aa12.96□□□□□ -0.33
TRAFD1-206ENST00000549358 AGBL1Q96MI9 1066 aa12.96□□□□□ -0.33
TRAFD1-206ENST00000549358 HOMER2Q9NSB8 354 aa12.96□□□□□ -0.33
TRAFD1-206ENST00000549358 GNEQ9Y223 722 aaKnown RBP12.96□□□□□ -0.33
TRAFD1-206ENST00000549358 SLC4A4Q9Y6R1 1079 aa12.96□□□□□ -0.33
TRAFD1-206ENST00000549358 GBF1Q92538 1859 aa12.95□□□□□ -0.34
TRAFD1-206ENST00000549358 ZEB2O60315 1214 aa12.95□□□□□ -0.34
TRAFD1-206ENST00000549358 CHGBP05060 677 aa12.95□□□□□ -0.34
TRAFD1-206ENST00000549358 SMPD1P17405 629 aa12.95□□□□□ -0.34
TRAFD1-206ENST00000549358 ADD2P35612 726 aa12.95□□□□□ -0.34
TRAFD1-206ENST00000549358 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.95□□□□□ -0.34
TRAFD1-206ENST00000549358 ITPRIPQ8IWB1 547 aa12.95□□□□□ -0.34
TRAFD1-206ENST00000549358 STK11IPQ8N1F8 1099 aa12.95□□□□□ -0.34
TRAFD1-206ENST00000549358 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.95□□□□□ -0.34
TRAFD1-206ENST00000549358 SEZ6LQ9BYH1 1024 aa12.95□□□□□ -0.34
TRAFD1-206ENST00000549358 SLC38A10Q9HBR0 1119 aa12.95□□□□□ -0.34
TRAFD1-206ENST00000549358 CLIP2Q9UDT6 1046 aa12.95□□□□□ -0.34
TRAFD1-206ENST00000549358 SOWAHBA6NEL2 793 aa12.94□□□□□ -0.34
TRAFD1-206ENST00000549358 PFKMP08237 780 aa12.94□□□□□ -0.34
TRAFD1-206ENST00000549358 CYP2C9P11712 490 aa12.94□□□□□ -0.34
TRAFD1-206ENST00000549358 TMEM63BQ5T3F8 832 aa12.94□□□□□ -0.34
TRAFD1-206ENST00000549358 CEP85Q6P2H3 762 aa12.94□□□□□ -0.34
TRAFD1-206ENST00000549358 RHPN1Q8TCX5 695 aa12.94□□□□□ -0.34
TRAFD1-206ENST00000549358 ALDH8A1Q9H2A2 487 aaPredicted RBP12.94□□□□□ -0.34
TRAFD1-206ENST00000549358 MKNK2Q9HBH9 465 aa12.94□□□□□ -0.34
TRAFD1-206ENST00000549358 CD320Q9NPF0 282 aa12.94□□□□□ -0.34
TRAFD1-206ENST00000549358 PDGFCQ9NRA1 345 aa12.94□□□□□ -0.34
TRAFD1-206ENST00000549358 TRMT13Q9NUP7 481 aaKnown RBP12.94□□□□□ -0.34
TRAFD1-206ENST00000549358 PAG1Q9NWQ8 432 aa12.94□□□□□ -0.34
TRAFD1-206ENST00000549358 NYAP2Q9P242 653 aa12.94□□□□□ -0.34
TRAFD1-206ENST00000549358 DDX49Q9Y6V7 483 aaKnown RBP12.94□□□□□ -0.34
TRAFD1-206ENST00000549358 ASB14A6NK59 587 aa12.93□□□□□ -0.34
TRAFD1-206ENST00000549358 PI4K2BG5E9Z4 385 aa12.93□□□□□ -0.34
TRAFD1-206ENST00000549358 ARHGEF15O94989 841 aa12.93□□□□□ -0.34
TRAFD1-206ENST00000549358 IFIT2P09913 472 aaKnown RBP12.93□□□□□ -0.34
TRAFD1-206ENST00000549358 RASA1P20936 1047 aa12.93□□□□□ -0.34
TRAFD1-206ENST00000549358 OAZ1P54368 228 aa12.93□□□□□ -0.34
TRAFD1-206ENST00000549358 TAP1Q03518 808 aa12.93□□□□□ -0.34
TRAFD1-206ENST00000549358 EEPD1Q7L9B9 569 aa12.93□□□□□ -0.34
TRAFD1-206ENST00000549358 FTSJ3Q8IY81 847 aaKnown RBP12.93□□□□□ -0.34
TRAFD1-206ENST00000549358 CLASRPQ8N2M8 674 aaKnown RBP12.93□□□□□ -0.34
TRAFD1-206ENST00000549358 FAM133AQ8N9E0 248 aa12.93□□□□□ -0.34
TRAFD1-206ENST00000549358 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.93□□□□□ -0.348e-7■■■■■ 37.5
TRAFD1-206ENST00000549358 FEM1BQ9UK73 627 aa12.93□□□□□ -0.34
TRAFD1-206ENST00000549358 TRANK1O15050 2925 aa12.93□□□□□ -0.34
TRAFD1-206ENST00000549358 MYH8P13535 1937 aa12.92□□□□□ -0.34
TRAFD1-206ENST00000549358 SUPT20HL2P0C7V6 817 aa12.92□□□□□ -0.34
TRAFD1-206ENST00000549358 ACTN1P12814 892 aa12.92□□□□□ -0.34
TRAFD1-206ENST00000549358 GRB10Q13322 594 aa12.92□□□□□ -0.34
TRAFD1-206ENST00000549358 HSP90AB4PQ58FF6 505 aa12.92□□□□□ -0.34
TRAFD1-206ENST00000549358 IQSEC1Q6DN90 963 aa12.92□□□□□ -0.34
TRAFD1-206ENST00000549358 TAPT1Q6NXT6 567 aa12.92□□□□□ -0.34
TRAFD1-206ENST00000549358 PHOSPHO2Q8TCD6 241 aa12.92□□□□□ -0.34
TRAFD1-206ENST00000549358 BOLA2Q9H3K6 86 aa12.92□□□□□ -0.34
TRAFD1-206ENST00000549358 ACAD9Q9H845 621 aa12.92□□□□□ -0.34
TRAFD1-206ENST00000549358 A1CFQ9NQ94 594 aaKnown RBP12.92□□□□□ -0.34
TRAFD1-206ENST00000549358 ARPP21Q9UBL0 812 aaPredicted RBP12.92□□□□□ -0.34
TRAFD1-206ENST00000549358 COG6Q9Y2V7 657 aa12.92□□□□□ -0.34
TRAFD1-206ENST00000549358 TNKSO95271 1327 aa12.91□□□□□ -0.34
TRAFD1-206ENST00000549358 ZBED9Q6R2W3 1325 aa12.91□□□□□ -0.34
TRAFD1-206ENST00000549358 MINDY4BA8MYZ0 360 aa12.91□□□□□ -0.34
TRAFD1-206ENST00000549358 KIF28PB7ZC32 967 aa12.91□□□□□ -0.34
TRAFD1-206ENST00000549358 CD44P16070 742 aaKnown RBP12.91□□□□□ -0.34
TRAFD1-206ENST00000549358 HERC6Q8IVU3 1022 aa12.91□□□□□ -0.34
TRAFD1-206ENST00000549358 SLC9A7Q96T83 725 aa12.91□□□□□ -0.34
TRAFD1-206ENST00000549358 FTOQ9C0B1 505 aaKnown RBP eCLIP12.91□□□□□ -0.34
TRAFD1-206ENST00000549358 PUS7LQ9H0K6 701 aaKnown RBP12.91□□□□□ -0.34
TRAFD1-206ENST00000549358 ISY1Q9ULR0 285 aaKnown RBP12.91□□□□□ -0.34
TRAFD1-206ENST00000549358 Q9Y3F1 56 aa12.91□□□□□ -0.34
TRAFD1-206ENST00000549358 LRRC37A2A6NM11 1700 aa12.91□□□□□ -0.34
TRAFD1-206ENST00000549358 LPXNO60711 386 aa12.9□□□□□ -0.34
TRAFD1-206ENST00000549358 RLBP1P12271 317 aa12.9□□□□□ -0.34
TRAFD1-206ENST00000549358 UBE3CQ15386 1083 aa12.9□□□□□ -0.34
TRAFD1-206ENST00000549358 FAM47CQ5HY64 1035 aa12.9□□□□□ -0.34
TRAFD1-206ENST00000549358 KIAA1211Q6ZU35 1233 aa12.9□□□□□ -0.34
TRAFD1-206ENST00000549358 SPRED2Q7Z698 418 aa12.9□□□□□ -0.34
TRAFD1-206ENST00000549358 FBXO16Q8IX29 292 aaPredicted RBP12.9□□□□□ -0.34
TRAFD1-206ENST00000549358 MKL1Q969V6 931 aa12.9□□□□□ -0.34
TRAFD1-206ENST00000549358 CHMP4CQ96CF2 233 aa12.9□□□□□ -0.34
TRAFD1-206ENST00000549358 TRERF1Q96PN7 1200 aa12.9□□□□□ -0.34
TRAFD1-206ENST00000549358 RNF146Q9NTX7 359 aa12.9□□□□□ -0.34
TRAFD1-206ENST00000549358 BAZ2AQ9UIF9 1905 aaKnown RBP12.9□□□□□ -0.35
TRAFD1-206ENST00000549358 IGKV6D-41A0A0C4DH26 115 aa12.89□□□□□ -0.35
TRAFD1-206ENST00000549358 PRR33A8MZF0 331 aa12.89□□□□□ -0.35
TRAFD1-206ENST00000549358 TMEM232C9JQI7 657 aa12.89□□□□□ -0.35
TRAFD1-206ENST00000549358 IQCF3P0C7M6 154 aa12.89□□□□□ -0.35
TRAFD1-206ENST00000549358 BMP3P12645 472 aa12.89□□□□□ -0.35
TRAFD1-206ENST00000549358 RFC2P35250 354 aa12.89□□□□□ -0.35
TRAFD1-206ENST00000549358 SBK1Q52WX2 424 aa12.89□□□□□ -0.35
TRAFD1-206ENST00000549358 SLFN13Q68D06 897 aa12.89□□□□□ -0.35
TRAFD1-206ENST00000549358 ZNF444Q8N0Y2 327 aaPredicted RBP12.89□□□□□ -0.35
TRAFD1-206ENST00000549358 LRRC47Q8N1G4 583 aaKnown RBP12.89□□□□□ -0.35
TRAFD1-206ENST00000549358 RETREG2Q8NC44 543 aa12.89□□□□□ -0.35
TRAFD1-206ENST00000549358 PPP1R13LQ8WUF5 828 aa12.89□□□□□ -0.35
TRAFD1-206ENST00000549358 KIF1BPQ96EK5 621 aa12.89□□□□□ -0.35
TRAFD1-206ENST00000549358 CEP95Q96GE4 821 aa12.89□□□□□ -0.35
TRAFD1-206ENST00000549358 UIMC1Q96RL1 719 aa12.89□□□□□ -0.35
TRAFD1-206ENST00000549358 HAUS7Q99871 368 aa12.89□□□□□ -0.35
TRAFD1-206ENST00000549358 ZNF536O15090 1300 aa12.88□□□□□ -0.35
TRAFD1-206ENST00000549358 PRDM1O75626 825 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms