RNA–Protein interactions for RNA: ENST00000549034.1

RAB5B-205, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5B, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-205ENST00000549034 COBLO75128 1261 aa11.14□□□□□ -0.63
RAB5B-205ENST00000549034 PLEKHA8P1O95397 391 aa11.14□□□□□ -0.63
RAB5B-205ENST00000549034 MYCP01106 439 aaPredicted RBP11.14□□□□□ -0.63
RAB5B-205ENST00000549034 PGK2P07205 417 aa11.14□□□□□ -0.63
RAB5B-205ENST00000549034 ELNP15502 786 aa11.14□□□□□ -0.63
RAB5B-205ENST00000549034 TAL1P17542 331 aaPredicted RBP11.14□□□□□ -0.63
RAB5B-205ENST00000549034 PDIA3P30101 505 aaKnown RBP11.14□□□□□ -0.63
RAB5B-205ENST00000549034 GRK4P32298 578 aa11.14□□□□□ -0.63
RAB5B-205ENST00000549034 METAP2P50579 478 aaKnown RBP eCLIP11.14□□□□□ -0.63
RAB5B-205ENST00000549034 CCT2P78371 535 aaKnown RBP11.14□□□□□ -0.63
RAB5B-205ENST00000549034 GRB14Q14449 540 aa11.14□□□□□ -0.63
RAB5B-205ENST00000549034 SLC9C1Q4G0N8 1177 aa11.14□□□□□ -0.63
RAB5B-205ENST00000549034 MUM1L1Q5H9M0 696 aa11.14□□□□□ -0.63
RAB5B-205ENST00000549034 PIP4P2Q8N4L2 257 aa11.14□□□□□ -0.63
RAB5B-205ENST00000549034 NPLOC4Q8TAT6 608 aa11.14□□□□□ -0.63
RAB5B-205ENST00000549034 SH3TC2Q8TF17 1288 aa11.14□□□□□ -0.63
RAB5B-205ENST00000549034 SOCS4Q8WXH5 440 aa11.14□□□□□ -0.63
RAB5B-205ENST00000549034 USP6NLQ92738 828 aa11.14□□□□□ -0.63
RAB5B-205ENST00000549034 RRP36Q96EU6 259 aaKnown RBP11.14□□□□□ -0.63
RAB5B-205ENST00000549034 AMNQ9BXJ7 453 aa11.14□□□□□ -0.63
RAB5B-205ENST00000549034 AGXT2Q9BYV1 514 aa11.14□□□□□ -0.63
RAB5B-205ENST00000549034 BACH2Q9BYV9 841 aa11.14□□□□□ -0.63
RAB5B-205ENST00000549034 ALDH8A1Q9H2A2 487 aaPredicted RBP11.14□□□□□ -0.63
RAB5B-205ENST00000549034 ACAD9Q9H845 621 aa11.14□□□□□ -0.63
RAB5B-205ENST00000549034 A0A0G2JMZ2 1700 aa11.13□□□□□ -0.63
RAB5B-205ENST00000549034 PNMA6FA0A0J9YX94 578 aa11.13□□□□□ -0.63
RAB5B-205ENST00000549034 CCDC196A0A1B0GTZ2 297 aa11.13□□□□□ -0.63
RAB5B-205ENST00000549034 CCDC85CA6NKD9 419 aa11.13□□□□□ -0.63
RAB5B-205ENST00000549034 XRCC5P13010 732 aaKnown RBP11.13□□□□□ -0.63
RAB5B-205ENST00000549034 CDC27P30260 824 aa11.13□□□□□ -0.63
RAB5B-205ENST00000549034 ADD1P35611 737 aaKnown RBP11.13□□□□□ -0.63
RAB5B-205ENST00000549034 RBM25P49756 843 aaKnown RBP11.13□□□□□ -0.63
RAB5B-205ENST00000549034 AK2P54819 239 aa11.13□□□□□ -0.63
RAB5B-205ENST00000549034 STK3Q13188 491 aa11.13□□□□□ -0.63
RAB5B-205ENST00000549034 PPP2R5BQ15173 497 aa11.13□□□□□ -0.63
RAB5B-205ENST00000549034 ANKRD1Q15327 319 aa11.13□□□□□ -0.63
RAB5B-205ENST00000549034 CCL14Q16627 93 aa11.13□□□□□ -0.63
RAB5B-205ENST00000549034 SLC35G1Q2M3R5 365 aa11.13□□□□□ -0.63
RAB5B-205ENST00000549034 NSMFQ6X4W1 530 aa11.13□□□□□ -0.63
RAB5B-205ENST00000549034 ABRAQ8N0Z2 381 aa11.13□□□□□ -0.63
RAB5B-205ENST00000549034 SLAIN1Q8ND83 568 aa11.13□□□□□ -0.63
RAB5B-205ENST00000549034 PXYLP1Q8TE99 480 aa11.13□□□□□ -0.63
RAB5B-205ENST00000549034 IL17RAQ96F46 866 aa11.13□□□□□ -0.63
RAB5B-205ENST00000549034 ZNF274Q96GC6 653 aaPredicted RBP11.13□□□□□ -0.63
RAB5B-205ENST00000549034 ABHD8Q96I13 439 aa11.13□□□□□ -0.63
RAB5B-205ENST00000549034 PLXNB2O15031 1838 aa11.13□□□□□ -0.63
RAB5B-205ENST00000549034 hCG_1642624A0A1W2PR95 340 aa11.12□□□□□ -0.63
RAB5B-205ENST00000549034 PTPDC1A2A3K4 754 aa11.12□□□□□ -0.63
RAB5B-205ENST00000549034 VASPP50552 380 aaPredicted RBP11.12□□□□□ -0.63
RAB5B-205ENST00000549034 EVCP57679 992 aa11.12□□□□□ -0.63
RAB5B-205ENST00000549034 UBXN2AP68543 259 aa11.12□□□□□ -0.63
RAB5B-205ENST00000549034 TRAF1Q13077 416 aa11.12□□□□□ -0.63
RAB5B-205ENST00000549034 RNF207Q6ZRF8 634 aa11.12□□□□□ -0.63
RAB5B-205ENST00000549034 TMTC3Q6ZXV5 915 aa11.12□□□□□ -0.63
RAB5B-205ENST00000549034 NOL8Q76FK4 1167 aaKnown RBP11.12□□□□□ -0.63
RAB5B-205ENST00000549034 TRMT44Q8IYL2 757 aaKnown RBP11.12□□□□□ -0.63
RAB5B-205ENST00000549034 CLEC4DQ8WXI8 215 aa11.12□□□□□ -0.63
RAB5B-205ENST00000549034 TBC1D5Q92609 795 aa11.12□□□□□ -0.63
RAB5B-205ENST00000549034 MTMR8Q96EF0 704 aa11.12□□□□□ -0.63
RAB5B-205ENST00000549034 SPZ1Q9BXG8 430 aa11.12□□□□□ -0.63
RAB5B-205ENST00000549034 FAM217BQ9NTX9 383 aaPredicted RBP11.12□□□□□ -0.63
RAB5B-205ENST00000549034 SEC63Q9UGP8 760 aaKnown RBP11.12□□□□□ -0.63
RAB5B-205ENST00000549034 MRPL11Q9Y3B7 192 aaKnown RBP11.12□□□□□ -0.63
RAB5B-205ENST00000549034 PCDHA1Q9Y5I3 950 aa11.12□□□□□ -0.63
RAB5B-205ENST00000549034 V9GY48 417 aaPredicted RBP11.12□□□□□ -0.63
RAB5B-205ENST00000549034 ABCB11O95342 1321 aa11.11□□□□□ -0.63
RAB5B-205ENST00000549034 POTEB2H3BUK9 544 aa11.11□□□□□ -0.63
RAB5B-205ENST00000549034 PPP1R11O60927 126 aaPredicted RBP11.11□□□□□ -0.63
RAB5B-205ENST00000549034 CALML3P27482 149 aa11.11□□□□□ -0.63
RAB5B-205ENST00000549034 RCAN1P53805 252 aa11.11□□□□□ -0.63
RAB5B-205ENST00000549034 TRIM32Q13049 653 aa11.11□□□□□ -0.63
RAB5B-205ENST00000549034 BAATQ14032 418 aaPredicted RBP11.11□□□□□ -0.63
RAB5B-205ENST00000549034 ZNF792Q3KQV3 632 aa11.11□□□□□ -0.63
RAB5B-205ENST00000549034 MFSD14CQ5VZR4 134 aa11.11□□□□□ -0.63
RAB5B-205ENST00000549034 TRIB2Q92519 343 aa11.11□□□□□ -0.63
RAB5B-205ENST00000549034 KIF2CQ99661 725 aa11.11□□□□□ -0.63
RAB5B-205ENST00000549034 APBA2Q99767 749 aa11.11□□□□□ -0.63
RAB5B-205ENST00000549034 SLKQ9H2G2 1235 aaPredicted RBP11.11□□□□□ -0.63
RAB5B-205ENST00000549034 A1CFQ9NQ94 594 aaKnown RBP11.11□□□□□ -0.63
RAB5B-205ENST00000549034 FLRT1Q9NZU1 646 aa11.11□□□□□ -0.63
RAB5B-205ENST00000549034 TPCN1Q9ULQ1 816 aa11.11□□□□□ -0.63
RAB5B-205ENST00000549034 DIS3Q9Y2L1 958 aaKnown RBP11.11□□□□□ -0.63
RAB5B-205ENST00000549034 NFIBO00712 420 aa11.1□□□□□ -0.63
RAB5B-205ENST00000549034 INHAP05111 366 aa11.1□□□□□ -0.63
RAB5B-205ENST00000549034 HOXC6P09630 235 aa11.1□□□□□ -0.63
RAB5B-205ENST00000549034 AKAP17AQ02040 695 aaKnown RBP11.1□□□□□ -0.63
RAB5B-205ENST00000549034 CNTN2Q02246 1040 aa11.1□□□□□ -0.63
RAB5B-205ENST00000549034 PRAMEF19Q5SWL8 479 aa11.1□□□□□ -0.63
RAB5B-205ENST00000549034 MCF2L2Q86YR7 1114 aa11.1□□□□□ -0.63
RAB5B-205ENST00000549034 RGS22Q8NE09 1264 aa11.1□□□□□ -0.63
RAB5B-205ENST00000549034 MAML3Q96JK9 1138 aa11.1□□□□□ -0.63
RAB5B-205ENST00000549034 PURBQ96QR8 312 aaKnown RBP11.1□□□□□ -0.63
RAB5B-205ENST00000549034 TMEM106CQ9BVX2 250 aa11.1□□□□□ -0.63
RAB5B-205ENST00000549034 NCOA5Q9HCD5 579 aaKnown RBP11.1□□□□□ -0.63
RAB5B-205ENST00000549034 CYP39A1Q9NYL5 469 aa11.1□□□□□ -0.63
RAB5B-205ENST00000549034 PLXNA1Q9UIW2 1896 aa11.1□□□□□ -0.63
RAB5B-205ENST00000549034 PFASO15067 1338 aa11.09□□□□□ -0.63
RAB5B-205ENST00000549034 DNAJC25-GNG10A0A024R161 153 aa11.09□□□□□ -0.63
RAB5B-205ENST00000549034 SOWAHBA6NEL2 793 aa11.09□□□□□ -0.63
RAB5B-205ENST00000549034 CPLX1O14810 134 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms