RNA–Protein interactions for RNA: ENST00000549015.1

LGR5-205, Transcript of leucine rich repeat containing G protein-coupled receptor 5, humanhuman

TSL 3

Gene LGR5, Length 298 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5-205ENST00000549015 TRIM56Q9BRZ2 755 aaKnown RBP1.93□□□□□ -2.1
LGR5-205ENST00000549015 FUCA2Q9BTY2 467 aa1.93□□□□□ -2.1
LGR5-205ENST00000549015 NOC4LQ9BVI4 516 aaKnown RBP1.93□□□□□ -2.1
LGR5-205ENST00000549015 UTP14AQ9BVJ6 771 aaKnown RBP1.93□□□□□ -2.1
LGR5-205ENST00000549015 OXCT2Q9BYC2 517 aaPredicted RBP1.93□□□□□ -2.1
LGR5-205ENST00000549015 KRT23Q9C075 422 aa1.93□□□□□ -2.1
LGR5-205ENST00000549015 ANKRD2Q9GZV1 360 aa1.93□□□□□ -2.1
LGR5-205ENST00000549015 NAT10Q9H0A0 1025 aaKnown RBP1.93□□□□□ -2.1
LGR5-205ENST00000549015 NUP62CLQ9H1M0 184 aa1.93□□□□□ -2.1
LGR5-205ENST00000549015 TSPY26PQ9H489 355 aa1.93□□□□□ -2.1
LGR5-205ENST00000549015 SUV39H2Q9H5I1 410 aa1.93□□□□□ -2.1
LGR5-205ENST00000549015 GREM2Q9H772 168 aa1.93□□□□□ -2.1
LGR5-205ENST00000549015 SPC25Q9HBM1 224 aa1.93□□□□□ -2.1
LGR5-205ENST00000549015 METTL14Q9HCE5 456 aaKnown RBP1.93□□□□□ -2.1
LGR5-205ENST00000549015 POLMQ9NP87 494 aaPredicted RBP1.93□□□□□ -2.1
LGR5-205ENST00000549015 EIF4ENIF1Q9NRA8 985 aaKnown RBP1.93□□□□□ -2.1
LGR5-205ENST00000549015 LATS2Q9NRM7 1088 aa1.93□□□□□ -2.1
LGR5-205ENST00000549015 CNNM1Q9NRU3 951 aa1.93□□□□□ -2.1
LGR5-205ENST00000549015 GINM1Q9NU53 330 aa1.93□□□□□ -2.1
LGR5-205ENST00000549015 SNTG2Q9NY99 539 aa1.93□□□□□ -2.1
LGR5-205ENST00000549015 ABI2Q9NYB9 513 aaPredicted RBP1.93□□□□□ -2.1
LGR5-205ENST00000549015 ZDHHC3Q9NYG2 299 aa1.93□□□□□ -2.1
LGR5-205ENST00000549015 SIRPGQ9P1W8 387 aa1.93□□□□□ -2.1
LGR5-205ENST00000549015 CNTN3Q9P232 1028 aa1.93□□□□□ -2.1
LGR5-205ENST00000549015 KLHL42Q9P2K6 505 aa1.93□□□□□ -2.1
LGR5-205ENST00000549015 KANSL3Q9P2N6 904 aa1.93□□□□□ -2.1
LGR5-205ENST00000549015 CCDC39Q9UFE4 941 aa1.93□□□□□ -2.1
LGR5-205ENST00000549015 TRMT112Q9UI30 125 aaKnown RBP1.93□□□□□ -2.1
LGR5-205ENST00000549015 ANAPC4Q9UJX5 808 aa1.93□□□□□ -2.1
LGR5-205ENST00000549015 DENND2AQ9ULE3 1009 aa1.93□□□□□ -2.1
LGR5-205ENST00000549015 ASAP1Q9ULH1 1129 aa1.93□□□□□ -2.1
LGR5-205ENST00000549015 STRIP2Q9ULQ0 834 aa1.93□□□□□ -2.1
LGR5-205ENST00000549015 NOL7Q9UMY1 257 aaKnown RBP1.93□□□□□ -2.1
LGR5-205ENST00000549015 ANGEL1Q9UNK9 670 aaKnown RBP1.93□□□□□ -2.1
LGR5-205ENST00000549015 ZKSCAN5Q9Y2L8 839 aa1.93□□□□□ -2.1
LGR5-205ENST00000549015 KIAA1551Q9HCM1 1747 aa1.93□□□□□ -2.1
LGR5-205ENST00000549015 ROBO3Q96MS0 1386 aa1.93□□□□□ -2.1
LGR5-205ENST00000549015 DOCK2Q92608 1830 aa1.93□□□□□ -2.1
LGR5-205ENST00000549015 TNRC6CQ9HCJ0 1690 aaKnown RBP1.93□□□□□ -2.1
LGR5-205ENST00000549015 ITGB4P16144 1822 aa1.92□□□□□ -2.1
LGR5-205ENST00000549015 FAM237AA0A1B0GTK4 181 aa1.92□□□□□ -2.1
LGR5-205ENST00000549015 TMEM238LA0A1B0GVL6 79 aa1.92□□□□□ -2.1
LGR5-205ENST00000549015 TCRBV5S4A2TA0A5A2 114 aa1.92□□□□□ -2.1
LGR5-205ENST00000549015 SYCE3A1L190 88 aa1.92□□□□□ -2.1
LGR5-205ENST00000549015 TTC24A2A3L6 582 aaPredicted RBP1.92□□□□□ -2.1
LGR5-205ENST00000549015 GOLGA8BA8MQT2 603 aa1.92□□□□□ -2.1
LGR5-205ENST00000549015 PHF20L1A8MW92 1017 aa1.92□□□□□ -2.1
LGR5-205ENST00000549015 M0R2C6 588 aa1.92□□□□□ -2.1
LGR5-205ENST00000549015 SH2B2O14492 632 aaPredicted RBP1.92□□□□□ -2.1
LGR5-205ENST00000549015 ZNF213O14771 459 aa1.92□□□□□ -2.1
LGR5-205ENST00000549015 CPLX1O14810 134 aa1.92□□□□□ -2.1
LGR5-205ENST00000549015 SMAD7O15105 426 aaKnown RBP1.92□□□□□ -2.1
LGR5-205ENST00000549015 FIBPO43427 364 aa1.92□□□□□ -2.1
LGR5-205ENST00000549015 PRC1O43663 620 aa1.92□□□□□ -2.1
LGR5-205ENST00000549015 KINO60870 393 aaKnown RBP1.92□□□□□ -2.1
LGR5-205ENST00000549015 PPP6R2O75170 966 aa1.92□□□□□ -2.1
LGR5-205ENST00000549015 RPS6KA4O75676 772 aa1.92□□□□□ -2.1
LGR5-205ENST00000549015 SASH3O75995 380 aa1.92□□□□□ -2.1
LGR5-205ENST00000549015 DDAH1O94760 285 aa1.92□□□□□ -2.1
LGR5-205ENST00000549015 TRIM37O94972 964 aa1.92□□□□□ -2.1
LGR5-205ENST00000549015 DEXIO95424 95 aa1.92□□□□□ -2.1
LGR5-205ENST00000549015 LARGE1O95461 756 aa1.92□□□□□ -2.1
LGR5-205ENST00000549015 MAP4K4O95819 1239 aaPredicted RBP1.92□□□□□ -2.1
LGR5-205ENST00000549015 FGAP02671 866 aa1.92□□□□□ -2.1
LGR5-205ENST00000549015 TUBB4AP04350 444 aa1.92□□□□□ -2.1
LGR5-205ENST00000549015 TPM2P07951 284 aa1.92□□□□□ -2.1
LGR5-205ENST00000549015 SLC3A2P08195 630 aaKnown RBP1.92□□□□□ -2.1
LGR5-205ENST00000549015 CALM1P0DP23 149 aa1.92□□□□□ -2.1
LGR5-205ENST00000549015 CALM2P0DP24 149 aa1.92□□□□□ -2.1
LGR5-205ENST00000549015 CALM3P0DP25 149 aa1.92□□□□□ -2.1
LGR5-205ENST00000549015 PDE6AP16499 860 aa1.92□□□□□ -2.1
LGR5-205ENST00000549015 XBP1P17861 261 aa1.92□□□□□ -2.1
LGR5-205ENST00000549015 PDIA3P30101 505 aaKnown RBP1.92□□□□□ -2.1
LGR5-205ENST00000549015 CDC25BP30305 580 aa1.92□□□□□ -2.1
LGR5-205ENST00000549015 HOXA7P31268 230 aaPredicted RBP1.92□□□□□ -2.1
LGR5-205ENST00000549015 GPC1P35052 558 aa1.92□□□□□ -2.1
LGR5-205ENST00000549015 SLC19A1P41440 591 aa1.92□□□□□ -2.1
LGR5-205ENST00000549015 MCAMP43121 646 aa1.92□□□□□ -2.1
LGR5-205ENST00000549015 CRKLP46109 303 aaKnown RBP1.92□□□□□ -2.1
LGR5-205ENST00000549015 KCNJ6P48051 423 aa1.92□□□□□ -2.1
LGR5-205ENST00000549015 SOX9P48436 509 aa1.92□□□□□ -2.1
LGR5-205ENST00000549015 METAP2P50579 478 aaKnown RBP eCLIP1.92□□□□□ -2.1
LGR5-205ENST00000549015 RNF144AP50876 292 aaPredicted RBP1.92□□□□□ -2.1
LGR5-205ENST00000549015 TPM4P67936 248 aa1.92□□□□□ -2.1
LGR5-205ENST00000549015 KIAA2012Q0VF49 1180 aa1.92□□□□□ -2.1
LGR5-205ENST00000549015 SCRN1Q12765 414 aa1.92□□□□□ -2.1
LGR5-205ENST00000549015 POU4F2Q12837 409 aa1.92□□□□□ -2.1
LGR5-205ENST00000549015 IFRD2Q12894 506 aaPredicted RBP1.92□□□□□ -2.1
LGR5-205ENST00000549015 ORC2Q13416 577 aaPredicted RBP1.92□□□□□ -2.1
LGR5-205ENST00000549015 CAMK2GQ13555 558 aaPredicted RBP1.92□□□□□ -2.1
LGR5-205ENST00000549015 COL9A2Q14055 689 aaPredicted RBP1.92□□□□□ -2.1
LGR5-205ENST00000549015 RAB33AQ14088 237 aa1.92□□□□□ -2.1
LGR5-205ENST00000549015 STX1AQ16623 288 aa1.92□□□□□ -2.1
LGR5-205ENST00000549015 LRRC24Q50LG9 513 aa1.92□□□□□ -2.1
LGR5-205ENST00000549015 CCDC178Q5BJE1 867 aa1.92□□□□□ -2.1
LGR5-205ENST00000549015 CAVIN4Q5BKX8 364 aa1.92□□□□□ -2.1
LGR5-205ENST00000549015 RILPL1Q5EBL4 403 aa1.92□□□□□ -2.1
LGR5-205ENST00000549015 CT47A1Q5JQC4 288 aaPredicted RBP1.92□□□□□ -2.1
LGR5-205ENST00000549015 SLC9C2Q5TAH2 1124 aa1.92□□□□□ -2.1
LGR5-205ENST00000549015 ADALQ6DHV7 355 aa1.92□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms