RNA–Protein interactions for RNA: ENST00000548379.5

PTCH1-216, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-216ENST00000548379 SLC7A14Q8TBB6 771 aa5.92□□□□□ -1.46
PTCH1-216ENST00000548379 MISP3Q96FF7 219 aa5.92□□□□□ -1.46
PTCH1-216ENST00000548379 GPATCH3Q96I76 525 aa5.92□□□□□ -1.46
PTCH1-216ENST00000548379 FOXP3Q9BZS1 431 aa5.92□□□□□ -1.46
PTCH1-216ENST00000548379 SLKQ9H2G2 1235 aaPredicted RBP5.92□□□□□ -1.46
PTCH1-216ENST00000548379 ATP13A1Q9HD20 1204 aa5.92□□□□□ -1.46
PTCH1-216ENST00000548379 DUSP13Q9UII6 198 aa5.92□□□□□ -1.46
PTCH1-216ENST00000548379 PCDHA11Q9Y5I1 949 aa5.92□□□□□ -1.46
PTCH1-216ENST00000548379 FGF10O15520 208 aaPredicted RBP5.91□□□□□ -1.46
PTCH1-216ENST00000548379 ENDOUP21128 410 aaKnown RBP5.91□□□□□ -1.46
PTCH1-216ENST00000548379 ITGB7P26010 798 aa5.91□□□□□ -1.46
PTCH1-216ENST00000548379 ECI1P42126 302 aa5.91□□□□□ -1.46
PTCH1-216ENST00000548379 RNF187Q5TA31 235 aaPredicted RBP5.91□□□□□ -1.46
PTCH1-216ENST00000548379 EEF1DP3Q658K8 133 aa5.91□□□□□ -1.46
PTCH1-216ENST00000548379 E4F1Q66K89 784 aaPredicted RBP5.91□□□□□ -1.46
PTCH1-216ENST00000548379 STYK1Q6J9G0 422 aa5.91□□□□□ -1.46
PTCH1-216ENST00000548379 MAMDC2Q7Z304 686 aaPredicted RBP5.91□□□□□ -1.46
PTCH1-216ENST00000548379 NIM1KQ8IY84 436 aa5.91□□□□□ -1.46
PTCH1-216ENST00000548379 DCAF4Q8WV16 495 aa5.91□□□□□ -1.46
PTCH1-216ENST00000548379 ASB11Q8WXH4 323 aa5.91□□□□□ -1.46
PTCH1-216ENST00000548379 PTPRN2Q92932 1015 aa5.91□□□□□ -1.46
PTCH1-216ENST00000548379 MFSD3Q96ES6 412 aa5.91□□□□□ -1.46
PTCH1-216ENST00000548379 HRASLS5Q96KN8 279 aa5.91□□□□□ -1.46
PTCH1-216ENST00000548379 SPC25Q9HBM1 224 aa5.91□□□□□ -1.46
PTCH1-216ENST00000548379 INTS7Q9NVH2 962 aaKnown RBP5.91□□□□□ -1.46
PTCH1-216ENST00000548379 IFT57Q9NWB7 429 aa5.91□□□□□ -1.46
PTCH1-216ENST00000548379 ASXL2Q76L83 1435 aa5.91□□□□□ -1.46
PTCH1-216ENST00000548379 A0A087X0B3 334 aa5.9□□□□□ -1.46
PTCH1-216ENST00000548379 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.9□□□□□ -1.46
PTCH1-216ENST00000548379 BLACEA4D250 179 aa5.9□□□□□ -1.46
PTCH1-216ENST00000548379 FAM83GA6ND36 823 aa5.9□□□□□ -1.46
PTCH1-216ENST00000548379 DNAJC6O75061 913 aa5.9□□□□□ -1.46
PTCH1-216ENST00000548379 EFCAB14O75071 495 aa5.9□□□□□ -1.46
PTCH1-216ENST00000548379 PRNPP04156 253 aa5.9□□□□□ -1.46
PTCH1-216ENST00000548379 FURINP09958 794 aa5.9□□□□□ -1.46
PTCH1-216ENST00000548379 KCNJ6P48051 423 aa5.9□□□□□ -1.46
PTCH1-216ENST00000548379 TAF7LQ5H9L4 462 aa5.9□□□□□ -1.46
PTCH1-216ENST00000548379 INTS5Q6P9B9 1019 aaKnown RBP5.9□□□□□ -1.46
PTCH1-216ENST00000548379 RSPO2Q6UXX9 243 aaPredicted RBP5.9□□□□□ -1.46
PTCH1-216ENST00000548379 CCDC103Q8IW40 242 aa5.9□□□□□ -1.46
PTCH1-216ENST00000548379 MMP19Q99542 508 aa5.9□□□□□ -1.46
PTCH1-216ENST00000548379 SLC52A2Q9HAB3 445 aa5.9□□□□□ -1.46
PTCH1-216ENST00000548379 GPRC5CQ9NQ84 441 aa5.9□□□□□ -1.46
PTCH1-216ENST00000548379 TMEFF2Q9UIK5 374 aaPredicted RBP5.9□□□□□ -1.46
PTCH1-216ENST00000548379 DNAJC8O75937 253 aaPredicted RBP5.89□□□□□ -1.47
PTCH1-216ENST00000548379 GSTM1P09488 218 aa5.89□□□□□ -1.47
PTCH1-216ENST00000548379 PLS3P13797 630 aa5.89□□□□□ -1.47
PTCH1-216ENST00000548379 SDSP20132 328 aa5.89□□□□□ -1.47
PTCH1-216ENST00000548379 PTPROQ16827 1216 aa5.89□□□□□ -1.47
PTCH1-216ENST00000548379 AOC3Q16853 763 aa5.89□□□□□ -1.47
PTCH1-216ENST00000548379 C21orf62-AS1Q17RA5 79 aa5.89□□□□□ -1.47
PTCH1-216ENST00000548379 KRT26Q7Z3Y9 468 aa5.89□□□□□ -1.47
PTCH1-216ENST00000548379 BRAPQ7Z569 592 aa5.89□□□□□ -1.47
PTCH1-216ENST00000548379 FILIP1Q7Z7B0 1213 aa5.89□□□□□ -1.47
PTCH1-216ENST00000548379 THNSL2Q86YJ6 484 aa5.89□□□□□ -1.47
PTCH1-216ENST00000548379 CREG2Q8IUH2 290 aa5.89□□□□□ -1.47
PTCH1-216ENST00000548379 PPIL6Q8IXY8 311 aa5.89□□□□□ -1.47
PTCH1-216ENST00000548379 DHX37Q8IY37 1157 aaKnown RBP5.89□□□□□ -1.47
PTCH1-216ENST00000548379 TMEM52Q8NDY8 209 aa5.89□□□□□ -1.47
PTCH1-216ENST00000548379 SCLYQ96I15 445 aa5.89□□□□□ -1.47
PTCH1-216ENST00000548379 PTCHD1Q96NR3 888 aa5.89□□□□□ -1.47
PTCH1-216ENST00000548379 ZFYVE21Q9BQ24 234 aa5.89□□□□□ -1.47
PTCH1-216ENST00000548379 G6PC3Q9BUM1 346 aa5.89□□□□□ -1.47
PTCH1-216ENST00000548379 AP5S1Q9NUS5 200 aa5.89□□□□□ -1.47
PTCH1-216ENST00000548379 BSDC1Q9NW68 430 aaPredicted RBP5.89□□□□□ -1.47
PTCH1-216ENST00000548379 LMCD1Q9NZU5 365 aa5.89□□□□□ -1.47
PTCH1-216ENST00000548379 SFMBT1Q9UHJ3 866 aa5.89□□□□□ -1.47
PTCH1-216ENST00000548379 GSG1L2A8MUP6 293 aa5.88□□□□□ -1.47
PTCH1-216ENST00000548379 MEFVO15553 781 aaPredicted RBP5.88□□□□□ -1.47
PTCH1-216ENST00000548379 MED26O95402 600 aa5.88□□□□□ -1.47
PTCH1-216ENST00000548379 LTKP29376 864 aa5.88□□□□□ -1.47
PTCH1-216ENST00000548379 SEPHS1P49903 392 aa5.88□□□□□ -1.47
PTCH1-216ENST00000548379 EGR3Q06889 387 aa5.88□□□□□ -1.47
PTCH1-216ENST00000548379 KCNAB2Q13303 367 aa5.88□□□□□ -1.47
PTCH1-216ENST00000548379 STK11IPQ8N1F8 1099 aa5.88□□□□□ -1.47
PTCH1-216ENST00000548379 BCL7CQ8WUZ0 217 aaPredicted RBP5.88□□□□□ -1.47
PTCH1-216ENST00000548379 SEMA6BQ9H3T3 888 aa5.88□□□□□ -1.47
PTCH1-216ENST00000548379 GPR27Q9NS67 375 aa5.88□□□□□ -1.47
PTCH1-216ENST00000548379 ERVK13-1Q9NX77 482 aa5.88□□□□□ -1.47
PTCH1-216ENST00000548379 MAGEC2Q9UBF1 373 aaPredicted RBP5.88□□□□□ -1.47
PTCH1-216ENST00000548379 NACADO15069 1562 aa5.88□□□□□ -1.47
PTCH1-216ENST00000548379 TRBV23OR9-2A0A075B6M9 112 aa5.87□□□□□ -1.47
PTCH1-216ENST00000548379 COBLO75128 1261 aa5.87□□□□□ -1.47
PTCH1-216ENST00000548379 PAMP19021 973 aa5.87□□□□□ -1.47
PTCH1-216ENST00000548379 SPINK2P20155 84 aa5.87□□□□□ -1.47
PTCH1-216ENST00000548379 POU3F2P20265 443 aaPredicted RBP5.87□□□□□ -1.47
PTCH1-216ENST00000548379 LTBRP36941 435 aa5.87□□□□□ -1.47
PTCH1-216ENST00000548379 GRIK1P39086 918 aa5.87□□□□□ -1.47
PTCH1-216ENST00000548379 AMPD3Q01432 767 aa5.87□□□□□ -1.47
PTCH1-216ENST00000548379 IQCEQ6IPM2 695 aa5.87□□□□□ -1.47
PTCH1-216ENST00000548379 KCNT2Q6UVM3 1135 aa5.87□□□□□ -1.47
PTCH1-216ENST00000548379 CYP2R1Q6VVX0 501 aa5.87□□□□□ -1.47
PTCH1-216ENST00000548379 ZPBP2Q6X784 338 aa5.87□□□□□ -1.47
PTCH1-216ENST00000548379 NFXL1Q6ZNB6 911 aa5.87□□□□□ -1.47
PTCH1-216ENST00000548379 USP53Q70EK8 1073 aa5.87□□□□□ -1.47
PTCH1-216ENST00000548379 FGD2Q7Z6J4 655 aa5.87□□□□□ -1.47
PTCH1-216ENST00000548379 DTX1Q86Y01 620 aa5.87□□□□□ -1.47
PTCH1-216ENST00000548379 KSR1Q8IVT5 923 aa5.87□□□□□ -1.47
PTCH1-216ENST00000548379 FCRL2Q96LA5 508 aaPredicted RBP5.87□□□□□ -1.47
PTCH1-216ENST00000548379 PCDH12Q9NPG4 1184 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms