RNA–Protein interactions for RNA: ENST00000548086.2

SCN8A-205, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 5

Gene SCN8A, Length 1,966 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-205ENST00000548086 VWA5AO00534 786 aa12.67□□□□□ -0.38
SCN8A-205ENST00000548086 XBP1P17861 261 aa12.67□□□□□ -0.38
SCN8A-205ENST00000548086 DSG3P32926 999 aa12.67□□□□□ -0.38
SCN8A-205ENST00000548086 UBE2HP62256 183 aa12.67□□□□□ -0.38
SCN8A-205ENST00000548086 COG2Q14746 738 aa12.67□□□□□ -0.38
SCN8A-205ENST00000548086 EARS2Q5JPH6 523 aaKnown RBP12.67□□□□□ -0.38
SCN8A-205ENST00000548086 FBXO11Q86XK2 927 aa12.67□□□□□ -0.38
SCN8A-205ENST00000548086 AMNQ9BXJ7 453 aa12.67□□□□□ -0.38
SCN8A-205ENST00000548086 ASCC2Q9H1I8 757 aaPredicted RBP12.67□□□□□ -0.38
SCN8A-205ENST00000548086 SLC38A10Q9HBR0 1119 aa12.67□□□□□ -0.38
SCN8A-205ENST00000548086 SMCO2A6NFE2 343 aa12.66□□□□□ -0.38
SCN8A-205ENST00000548086 ZBTB48P10074 688 aaPredicted RBP12.66□□□□□ -0.38
SCN8A-205ENST00000548086 CYP2C8P10632 490 aa12.66□□□□□ -0.38
SCN8A-205ENST00000548086 PDIA4P13667 645 aaKnown RBP12.66□□□□□ -0.38
SCN8A-205ENST00000548086 FSTL1Q12841 308 aa12.66□□□□□ -0.38
SCN8A-205ENST00000548086 UBE2SQ16763 222 aa12.66□□□□□ -0.38
SCN8A-205ENST00000548086 CCDC183Q5T5S1 534 aa12.66□□□□□ -0.38
SCN8A-205ENST00000548086 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.66□□□□□ -0.38
SCN8A-205ENST00000548086 ZIC5Q96T25 663 aa12.66□□□□□ -0.38
SCN8A-205ENST00000548086 P2RX7Q99572 595 aaKnown RBP12.66□□□□□ -0.38
SCN8A-205ENST00000548086 PTPN18Q99952 460 aa12.66□□□□□ -0.38
SCN8A-205ENST00000548086 FUCA2Q9BTY2 467 aa12.66□□□□□ -0.38
SCN8A-205ENST00000548086 FTOQ9C0B1 505 aaKnown RBP eCLIP12.66□□□□□ -0.38
SCN8A-205ENST00000548086 GDPD2Q9HCC8 539 aa12.66□□□□□ -0.38
SCN8A-205ENST00000548086 HOMER2Q9NSB8 354 aa12.66□□□□□ -0.38
SCN8A-205ENST00000548086 CNPY2Q9Y2B0 182 aa12.66□□□□□ -0.38
SCN8A-205ENST00000548086 PCNTO95613 3336 aa12.65□□□□□ -0.38
SCN8A-205ENST00000548086 BTBD19C9JJ37 291 aa12.65□□□□□ -0.38
SCN8A-205ENST00000548086 OPLAHO14841 1288 aa12.65□□□□□ -0.38
SCN8A-205ENST00000548086 HOXA7P31268 230 aaPredicted RBP12.65□□□□□ -0.38
SCN8A-205ENST00000548086 KRT2P35908 639 aa12.65□□□□□ -0.38
SCN8A-205ENST00000548086 GTF2A2P52657 109 aa12.65□□□□□ -0.38
SCN8A-205ENST00000548086 IRX3P78415 501 aaPredicted RBP12.65□□□□□ -0.38
SCN8A-205ENST00000548086 DNM1Q05193 864 aaKnown RBP12.65□□□□□ -0.38
SCN8A-205ENST00000548086 GNL2Q13823 731 aaKnown RBP12.65□□□□□ -0.38
SCN8A-205ENST00000548086 TMEM132BQ14DG7 1078 aa12.65□□□□□ -0.38
SCN8A-205ENST00000548086 PAXIP1Q6ZW49 1069 aaPredicted RBP12.65□□□□□ -0.38
SCN8A-205ENST00000548086 FASTKD5Q7L8L6 764 aaKnown RBP12.65□□□□□ -0.38
SCN8A-205ENST00000548086 REPS2Q8NFH8 660 aa12.65□□□□□ -0.38
SCN8A-205ENST00000548086 PGBD1Q96JS3 809 aa12.65□□□□□ -0.38
SCN8A-205ENST00000548086 ZMYND12Q9H0C1 365 aa12.65□□□□□ -0.38
SCN8A-205ENST00000548086 SH3GLB2Q9NR46 395 aa12.65□□□□□ -0.38
SCN8A-205ENST00000548086 TMEM260Q9NX78 707 aa12.65□□□□□ -0.38
SCN8A-205ENST00000548086 CCDC39Q9UFE4 941 aa12.65□□□□□ -0.38
SCN8A-205ENST00000548086 CCPG1Q9ULG6 757 aa12.65□□□□□ -0.38
SCN8A-205ENST00000548086 RIPK3Q9Y572 518 aa12.65□□□□□ -0.38
SCN8A-205ENST00000548086 ATP6V1DQ9Y5K8 247 aa12.65□□□□□ -0.38
SCN8A-205ENST00000548086 MYH15Q9Y2K3 1946 aa12.65□□□□□ -0.38
SCN8A-205ENST00000548086 FAM155AB1AL88 458 aaPredicted RBP12.65□□□□□ -0.38
SCN8A-205ENST00000548086 LETM1O95202 739 aaPredicted RBP12.65□□□□□ -0.38
SCN8A-205ENST00000548086 SLC10A3P09131 477 aa12.65□□□□□ -0.38
SCN8A-205ENST00000548086 CETPP11597 493 aa12.65□□□□□ -0.38
SCN8A-205ENST00000548086 HTRA3P83110 453 aa12.65□□□□□ -0.38
SCN8A-205ENST00000548086 SAFBQ15424 915 aaKnown RBP eCLIP12.65□□□□□ -0.38
SCN8A-205ENST00000548086 CYP4F22Q6NT55 531 aa12.65□□□□□ -0.38
SCN8A-205ENST00000548086 BLIDQ8IZY5 108 aa12.65□□□□□ -0.38
SCN8A-205ENST00000548086 CCDC148Q8NFR7 591 aa12.65□□□□□ -0.38
SCN8A-205ENST00000548086 TBC1D5Q92609 795 aa12.65□□□□□ -0.38
SCN8A-205ENST00000548086 PCDHA4Q9UN74 947 aa12.65□□□□□ -0.38
SCN8A-205ENST00000548086 ADAMTS5Q9UNA0 930 aa12.65□□□□□ -0.38
SCN8A-205ENST00000548086 PDHXO00330 501 aa12.64□□□□□ -0.39
SCN8A-205ENST00000548086 ICAM1P05362 532 aa12.64□□□□□ -0.39
SCN8A-205ENST00000548086 ALAS1P13196 640 aa12.64□□□□□ -0.39
SCN8A-205ENST00000548086 U2AF2P26368 475 aaKnown RBP eCLIP12.64□□□□□ -0.39
SCN8A-205ENST00000548086 HERVK_113P62684 666 aa12.64□□□□□ -0.39
SCN8A-205ENST00000548086 PLS1Q14651 629 aa12.64□□□□□ -0.39
SCN8A-205ENST00000548086 USP17L6PQ6QN14 398 aa12.64□□□□□ -0.39
SCN8A-205ENST00000548086 TNFRSF25Q93038 417 aa12.64□□□□□ -0.39
SCN8A-205ENST00000548086 PAGR1Q9BTK6 254 aa12.64□□□□□ -0.39
SCN8A-205ENST00000548086 BTBD7Q9P203 1132 aa12.64□□□□□ -0.39
SCN8A-205ENST00000548086 TFIP11Q9UBB9 837 aaKnown RBP12.64□□□□□ -0.39
SCN8A-205ENST00000548086 BIN2Q9UBW5 565 aaPredicted RBP12.64□□□□□ -0.39
SCN8A-205ENST00000548086 ZNF214Q9UL59 606 aaPredicted RBP12.64□□□□□ -0.39
SCN8A-205ENST00000548086 CTDP1Q9Y5B0 961 aaPredicted RBP12.64□□□□□ -0.39
SCN8A-205ENST00000548086 A0A0G2JMZ2 1700 aa12.64□□□□□ -0.39
SCN8A-205ENST00000548086 hCG_1984214I3L0E3 225 aa12.63□□□□□ -0.39
SCN8A-205ENST00000548086 M0R2N6 131 aa12.63□□□□□ -0.39
SCN8A-205ENST00000548086 ZBED4O75132 1171 aa12.63□□□□□ -0.39
SCN8A-205ENST00000548086 ADCY7P51828 1080 aa12.63□□□□□ -0.39
SCN8A-205ENST00000548086 CEBPZQ03701 1054 aaKnown RBP12.63□□□□□ -0.39
SCN8A-205ENST00000548086 MUM1L1Q5H9M0 696 aa12.63□□□□□ -0.39
SCN8A-205ENST00000548086 JAKMIP3Q5VZ66 844 aa12.63□□□□□ -0.39
SCN8A-205ENST00000548086 SNRNP48Q6IEG0 339 aaKnown RBP12.63□□□□□ -0.39
SCN8A-205ENST00000548086 NOSTRINQ8IVI9 506 aa12.63□□□□□ -0.39
SCN8A-205ENST00000548086 ZNF713Q8N859 430 aaPredicted RBP12.63□□□□□ -0.39
SCN8A-205ENST00000548086 CCDC12Q8WUD4 166 aaPredicted RBP12.63□□□□□ -0.39
SCN8A-205ENST00000548086 R3HDMLQ9H3Y0 253 aa12.63□□□□□ -0.39
SCN8A-205ENST00000548086 C6orf50Q9HD87 102 aa12.63□□□□□ -0.39
SCN8A-205ENST00000548086 TXNRD2Q9NNW7 524 aa12.63□□□□□ -0.39
SCN8A-205ENST00000548086 HOXC10Q9NYD6 342 aa12.63□□□□□ -0.39
SCN8A-205ENST00000548086 PCDHA6Q9UN73 950 aa12.63□□□□□ -0.39
SCN8A-205ENST00000548086 PCDHA8Q9Y5H6 950 aa12.63□□□□□ -0.39
SCN8A-205ENST00000548086 IGF2BP3O00425 579 aaKnown RBP eCLIP12.63□□□□□ -0.39
SCN8A-205ENST00000548086 NFIBO00712 420 aa12.63□□□□□ -0.39
SCN8A-205ENST00000548086 WNT7AO00755 349 aa12.63□□□□□ -0.39
SCN8A-205ENST00000548086 RRP9O43818 475 aaKnown RBP12.63□□□□□ -0.39
SCN8A-205ENST00000548086 ATP2B1P20020 1258 aa12.63□□□□□ -0.39
SCN8A-205ENST00000548086 HOXA13P31271 388 aaPredicted RBP12.63□□□□□ -0.39
SCN8A-205ENST00000548086 PIK3AP1Q6ZUJ8 805 aa12.63□□□□□ -0.39
SCN8A-205ENST00000548086 FOXP1Q9H334 677 aaPredicted RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms