RNA–Protein interactions for RNA: ENST00000547967.5

RNF41-203, Transcript of ring finger protein 41, humanhuman

TSL 1 (best)

Gene RNF41, Length 2,552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41-203ENST00000547967 MLKLQ8NB16 471 aa13.33□□□□□ -0.28
RNF41-203ENST00000547967 CACTINQ8WUQ7 758 aaKnown RBP13.33□□□□□ -0.28
RNF41-203ENST00000547967 FAM151AQ8WW52 585 aa13.33□□□□□ -0.28
RNF41-203ENST00000547967 USP17L15C9J2P7 530 aa13.32□□□□□ -0.28
RNF41-203ENST00000547967 USP17L13C9JLJ4 530 aa13.32□□□□□ -0.28
RNF41-203ENST00000547967 USP17L11C9JVI0 530 aa13.32□□□□□ -0.28
RNF41-203ENST00000547967 USP17L18D6R9N7 530 aa13.32□□□□□ -0.28
RNF41-203ENST00000547967 USP17L22D6RA61 530 aa13.32□□□□□ -0.28
RNF41-203ENST00000547967 USP17L17D6RBQ6 530 aa13.32□□□□□ -0.28
RNF41-203ENST00000547967 USP17L19D6RCP7 530 aa13.32□□□□□ -0.28
RNF41-203ENST00000547967 USP17L20D6RJB6 530 aa13.32□□□□□ -0.28
RNF41-203ENST00000547967 TDP2O95551 362 aa13.32□□□□□ -0.28
RNF41-203ENST00000547967 TAL1P17542 331 aaPredicted RBP13.32□□□□□ -0.28
RNF41-203ENST00000547967 CDC25BP30305 580 aa13.32□□□□□ -0.28
RNF41-203ENST00000547967 STX17P56962 302 aa13.32□□□□□ -0.28
RNF41-203ENST00000547967 USP17L24Q0WX57 530 aa13.32□□□□□ -0.28
RNF41-203ENST00000547967 CDC37Q16543 378 aaPredicted RBP13.32□□□□□ -0.28
RNF41-203ENST00000547967 SPDYE2Q495Y8 402 aa13.32□□□□□ -0.28
RNF41-203ENST00000547967 USP17L6PQ6QN14 398 aa13.32□□□□□ -0.28
RNF41-203ENST00000547967 MTFR1LQ9H019 292 aa13.32□□□□□ -0.28
RNF41-203ENST00000547967 RIC8AQ9NPQ8 531 aa13.32□□□□□ -0.28
RNF41-203ENST00000547967 DISC1Q9NRI5 854 aa13.32□□□□□ -0.28
RNF41-203ENST00000547967 WNT10BO00744 389 aa13.32□□□□□ -0.28
RNF41-203ENST00000547967 COBLO75128 1261 aa13.32□□□□□ -0.28
RNF41-203ENST00000547967 NOLC1Q14978 699 aaKnown RBP eCLIP13.32□□□□□ -0.28
RNF41-203ENST00000547967 USH1GQ495M9 461 aa13.32□□□□□ -0.28
RNF41-203ENST00000547967 RRAGBQ5VZM2 374 aa13.32□□□□□ -0.28
RNF41-203ENST00000547967 SAMD1Q6SPF0 538 aaPredicted RBP13.32□□□□□ -0.28
RNF41-203ENST00000547967 ACER1Q8TDN7 264 aa13.32□□□□□ -0.28
RNF41-203ENST00000547967 DCAF4Q8WV16 495 aa13.32□□□□□ -0.28
RNF41-203ENST00000547967 CUL5Q93034 780 aa13.32□□□□□ -0.28
RNF41-203ENST00000547967 NFE2L3Q9Y4A8 694 aa13.32□□□□□ -0.28
RNF41-203ENST00000547967 CNTNAP1P78357 1384 aa13.31□□□□□ -0.28
RNF41-203ENST00000547967 LAD1O00515 517 aa13.31□□□□□ -0.28
RNF41-203ENST00000547967 SLC37A4O43826 429 aa13.31□□□□□ -0.28
RNF41-203ENST00000547967 EGFRP00533 1210 aa13.31□□□□□ -0.28
RNF41-203ENST00000547967 CD44P16070 742 aaKnown RBP13.31□□□□□ -0.28
RNF41-203ENST00000547967 MRPL12P52815 198 aaKnown RBP13.31□□□□□ -0.28
RNF41-203ENST00000547967 ZYXQ15942 572 aaKnown RBP13.31□□□□□ -0.28
RNF41-203ENST00000547967 DNTTIP2Q5QJE6 756 aaKnown RBP13.31□□□□□ -0.28
RNF41-203ENST00000547967 CIAPIN1Q6FI81 312 aa13.31□□□□□ -0.28
RNF41-203ENST00000547967 TRIML1Q8N9V2 468 aa13.31□□□□□ -0.28
RNF41-203ENST00000547967 AGBL3Q8NEM8 1001 aa13.31□□□□□ -0.28
RNF41-203ENST00000547967 DPF2Q92785 391 aa13.31□□□□□ -0.28
RNF41-203ENST00000547967 GJA10Q969M2 543 aa13.31□□□□□ -0.28
RNF41-203ENST00000547967 NAP1L5Q96NT1 182 aaPredicted RBP13.31□□□□□ -0.28
RNF41-203ENST00000547967 MED15Q96RN5 788 aa13.31□□□□□ -0.28
RNF41-203ENST00000547967 HERC5Q9UII4 1024 aaKnown RBP13.31□□□□□ -0.28
RNF41-203ENST00000547967 GREB1LQ9C091 1923 aaPredicted RBP13.31□□□□□ -0.28
RNF41-203ENST00000547967 MYO1BO43795 1136 aa13.31□□□□□ -0.28
RNF41-203ENST00000547967 EDIL3O43854 480 aa13.31□□□□□ -0.28
RNF41-203ENST00000547967 UBASH3AP57075 661 aa13.31□□□□□ -0.28
RNF41-203ENST00000547967 TMC6Q7Z403 805 aa13.31□□□□□ -0.28
RNF41-203ENST00000547967 KIAA1524Q8TCG1 905 aa13.31□□□□□ -0.28
RNF41-203ENST00000547967 MTMR8Q96EF0 704 aa13.31□□□□□ -0.28
RNF41-203ENST00000547967 GSDMAQ96QA5 445 aa13.31□□□□□ -0.28
RNF41-203ENST00000547967 DACH1Q9UI36 760 aa13.31□□□□□ -0.28
RNF41-203ENST00000547967 PSDA5PKW4 1024 aaPredicted RBP13.3□□□□□ -0.28
RNF41-203ENST00000547967 NFKBIEO00221 500 aa13.3□□□□□ -0.28
RNF41-203ENST00000547967 OFD1O75665 1012 aa13.3□□□□□ -0.28
RNF41-203ENST00000547967 BMP3P12645 472 aa13.3□□□□□ -0.28
RNF41-203ENST00000547967 CDK11BP21127 795 aaKnown RBP13.3□□□□□ -0.28
RNF41-203ENST00000547967 PRPHP41219 470 aa13.3□□□□□ -0.28
RNF41-203ENST00000547967 NAALADL2Q58DX5 795 aa13.3□□□□□ -0.28
RNF41-203ENST00000547967 CCDC84Q86UT8 332 aaPredicted RBP13.3□□□□□ -0.28
RNF41-203ENST00000547967 SAMSN1Q9NSI8 373 aaKnown RBP13.3□□□□□ -0.28
RNF41-203ENST00000547967 MAPK8IP1Q9UQF2 711 aa13.3□□□□□ -0.28
RNF41-203ENST00000547967 DHX8Q14562 1220 aaKnown RBP13.3□□□□□ -0.28
RNF41-203ENST00000547967 CALCRLQ16602 461 aa13.3□□□□□ -0.28
RNF41-203ENST00000547967 CABP7Q86V35 215 aa13.3□□□□□ -0.28
RNF41-203ENST00000547967 LRRC8AQ8IWT6 810 aa13.3□□□□□ -0.28
RNF41-203ENST00000547967 LRRC15Q8TF66 581 aa13.3□□□□□ -0.28
RNF41-203ENST00000547967 VPS33BQ9H267 617 aa13.3□□□□□ -0.28
RNF41-203ENST00000547967 MYOZ2Q9NPC6 264 aa13.3□□□□□ -0.28
RNF41-203ENST00000547967 KIAA1755Q5JYT7 1200 aa13.29□□□□□ -0.28
RNF41-203ENST00000547967 GMCL1P1Q8NEA9 526 aa13.29□□□□□ -0.28
RNF41-203ENST00000547967 PYM1Q9BRP8 204 aaKnown RBP13.29□□□□□ -0.28
RNF41-203ENST00000547967 GTPBP6O43824 516 aaPredicted RBP13.29□□□□□ -0.28
RNF41-203ENST00000547967 PLCG1P19174 1290 aa13.29□□□□□ -0.28
RNF41-203ENST00000547967 PPP1R18Q6NYC8 613 aa13.29□□□□□ -0.28
RNF41-203ENST00000547967 GMCL1Q96IK5 515 aa13.29□□□□□ -0.28
RNF41-203ENST00000547967 CLK2P49760 499 aaKnown RBP13.28□□□□□ -0.28
RNF41-203ENST00000547967 RASSF7Q02833 373 aa13.28□□□□□ -0.28
RNF41-203ENST00000547967 SYDE2Q5VT97 1194 aa13.28□□□□□ -0.28
RNF41-203ENST00000547967 ENOX1Q8TC92 643 aaKnown RBP13.28□□□□□ -0.28
RNF41-203ENST00000547967 CCSER1Q9C0I3 900 aa13.28□□□□□ -0.28
RNF41-203ENST00000547967 ZBTB21Q9ULJ3 1066 aa13.28□□□□□ -0.28
RNF41-203ENST00000547967 R3HCC1Q9Y3T6 440 aaKnown RBP13.28□□□□□ -0.28
RNF41-203ENST00000547967 GJA3Q9Y6H8 435 aa13.28□□□□□ -0.28
RNF41-203ENST00000547967 POTEMA6NI47 508 aa13.28□□□□□ -0.28
RNF41-203ENST00000547967 MARCH6O60337 910 aa13.28□□□□□ -0.28
RNF41-203ENST00000547967 RPN1P04843 607 aaKnown RBP13.28□□□□□ -0.28
RNF41-203ENST00000547967 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.28□□□□□ -0.28
RNF41-203ENST00000547967 CCDC125Q86Z20 511 aa13.28□□□□□ -0.28
RNF41-203ENST00000547967 MTMR9Q96QG7 549 aa13.28□□□□□ -0.28
RNF41-203ENST00000547967 AMNQ9BXJ7 453 aa13.28□□□□□ -0.28
RNF41-203ENST00000547967 ARHGEF10LQ9HCE6 1279 aa13.28□□□□□ -0.28
RNF41-203ENST00000547967 DDX25Q9UHL0 483 aaKnown RBP13.28□□□□□ -0.28
RNF41-203ENST00000547967 PSME4Q14997 1843 aa13.28□□□□□ -0.28
RNF41-203ENST00000547967 PPP1R3GB7ZBB8 358 aa13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms