RNA–Protein interactions for RNA: ENST00000547877.5

LETMD1-212, Transcript of LETM1 domain containing 1, humanhuman

TSL 5

Gene LETMD1, Length 2,020 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-212ENST00000547877 ZIC5Q96T25 663 aa17.1■□□□□ 0.33
LETMD1-212ENST00000547877 PHF20Q9BVI0 1012 aa17.1■□□□□ 0.33
LETMD1-212ENST00000547877 RAVER2Q9HCJ3 691 aaKnown RBP17.1■□□□□ 0.33
LETMD1-212ENST00000547877 SMCHD1A6NHR9 2005 aa17.1■□□□□ 0.33
LETMD1-212ENST00000547877 CEP350Q5VT06 3117 aa17.1■□□□□ 0.33
LETMD1-212ENST00000547877 IGF2BP3O00425 579 aaKnown RBP eCLIP17.09■□□□□ 0.33
LETMD1-212ENST00000547877 MMP1P03956 469 aa17.09■□□□□ 0.33
LETMD1-212ENST00000547877 HTRA3P83110 453 aa17.09■□□□□ 0.33
LETMD1-212ENST00000547877 TMEM132BQ14DG7 1078 aa17.09■□□□□ 0.33
LETMD1-212ENST00000547877 LBX2Q6XYB7 198 aa17.09■□□□□ 0.33
LETMD1-212ENST00000547877 RGS22Q8NE09 1264 aa17.09■□□□□ 0.33
LETMD1-212ENST00000547877 CCDC148Q8NFR7 591 aa17.09■□□□□ 0.33
LETMD1-212ENST00000547877 CCDC12Q8WUD4 166 aaPredicted RBP17.09■□□□□ 0.33
LETMD1-212ENST00000547877 CAPNS2Q96L46 248 aa17.09■□□□□ 0.33
LETMD1-212ENST00000547877 ZNF214Q9UL59 606 aaPredicted RBP17.09■□□□□ 0.33
LETMD1-212ENST00000547877 CCPG1Q9ULG6 757 aa17.09■□□□□ 0.33
LETMD1-212ENST00000547877 A0A0G2JMZ2 1700 aa17.09■□□□□ 0.33
LETMD1-212ENST00000547877 NLRP5P59047 1200 aa17.09■□□□□ 0.33
LETMD1-212ENST00000547877 SREBF2Q12772 1141 aa17.09■□□□□ 0.33
LETMD1-212ENST00000547877 NOGQ13253 232 aa17.09■□□□□ 0.33
LETMD1-212ENST00000547877 MB21D1Q8N884 522 aa17.09■□□□□ 0.33
LETMD1-212ENST00000547877 OAZ1P54368 228 aa17.08■□□□□ 0.33
LETMD1-212ENST00000547877 TRAF1Q13077 416 aa17.08■□□□□ 0.33
LETMD1-212ENST00000547877 NPY5RQ15761 445 aa17.08■□□□□ 0.33
LETMD1-212ENST00000547877 FOXD4L5Q5VV16 416 aaPredicted RBP17.08■□□□□ 0.33
LETMD1-212ENST00000547877 LRSAM1Q6UWE0 723 aa17.08■□□□□ 0.33
LETMD1-212ENST00000547877 FAM177A1Q8N128 213 aaPredicted RBP17.08■□□□□ 0.33
LETMD1-212ENST00000547877 SMCR8Q8TEV9 937 aaPredicted RBP17.08■□□□□ 0.33
LETMD1-212ENST00000547877 FOXD4L4Q8WXT5 416 aaPredicted RBP17.08■□□□□ 0.33
LETMD1-212ENST00000547877 ZMYND12Q9H0C1 365 aa17.08■□□□□ 0.33
LETMD1-212ENST00000547877 ATP2A1O14983 1001 aa17.08■□□□□ 0.32
LETMD1-212ENST00000547877 PEX10O60683 326 aa17.08■□□□□ 0.32
LETMD1-212ENST00000547877 KIF23Q02241 960 aaPredicted RBP17.08■□□□□ 0.32
LETMD1-212ENST00000547877 PPP1R18Q6NYC8 613 aa17.08■□□□□ 0.32
LETMD1-212ENST00000547877 IFNL1Q8IU54 200 aa17.08■□□□□ 0.32
LETMD1-212ENST00000547877 BTBD7Q9P203 1132 aa17.08■□□□□ 0.32
LETMD1-212ENST00000547877 SMCO2A6NFE2 343 aa17.07■□□□□ 0.32
LETMD1-212ENST00000547877 AOC2O75106 756 aa17.07■□□□□ 0.32
LETMD1-212ENST00000547877 CALML3P27482 149 aa17.07■□□□□ 0.32
LETMD1-212ENST00000547877 PLS1Q14651 629 aa17.07■□□□□ 0.32
LETMD1-212ENST00000547877 SNRNP48Q6IEG0 339 aaKnown RBP17.07■□□□□ 0.32
LETMD1-212ENST00000547877 FERMT3Q86UX7 667 aa17.07■□□□□ 0.32
LETMD1-212ENST00000547877 DIS3L2Q8IYB7 885 aaKnown RBP17.07■□□□□ 0.32
LETMD1-212ENST00000547877 PARK7Q99497 189 aaKnown RBP17.07■□□□□ 0.32
LETMD1-212ENST00000547877 PAGR1Q9BTK6 254 aa17.07■□□□□ 0.32
LETMD1-212ENST00000547877 TEX13BQ9BXU2 312 aa17.07■□□□□ 0.32
LETMD1-212ENST00000547877 PANK2Q9BZ23 570 aa17.07■□□□□ 0.32
LETMD1-212ENST00000547877 TMEM63CQ9P1W3 806 aa17.07■□□□□ 0.32
LETMD1-212ENST00000547877 ESYT2A0FGR8 921 aa17.06■□□□□ 0.32
LETMD1-212ENST00000547877 LETM1O95202 739 aaPredicted RBP17.06■□□□□ 0.32
LETMD1-212ENST00000547877 TM4SF4P48230 202 aa17.06■□□□□ 0.32
LETMD1-212ENST00000547877 UBE2HP62256 183 aa17.06■□□□□ 0.32
LETMD1-212ENST00000547877 SAFBQ15424 915 aaKnown RBP eCLIP17.06■□□□□ 0.32
LETMD1-212ENST00000547877 ANP32BQ92688 251 aaKnown RBP17.06■□□□□ 0.32
LETMD1-212ENST00000547877 C6orf50Q9HD87 102 aa17.06■□□□□ 0.32
LETMD1-212ENST00000547877 TXNRD2Q9NNW7 524 aa17.06■□□□□ 0.32
LETMD1-212ENST00000547877 ZCCHC17Q9NP64 241 aaKnown RBP17.06■□□□□ 0.32
LETMD1-212ENST00000547877 RBPJLQ9UBG7 517 aa17.06■□□□□ 0.32
LETMD1-212ENST00000547877 PNMA2Q9UL42 364 aa17.06■□□□□ 0.32
LETMD1-212ENST00000547877 RIPK3Q9Y572 518 aa17.06■□□□□ 0.32
LETMD1-212ENST00000547877 BTBD18B2RXH4 712 aa17.06■□□□□ 0.32
LETMD1-212ENST00000547877 OPLAHO14841 1288 aa17.06■□□□□ 0.32
LETMD1-212ENST00000547877 ADAMTS3O15072 1205 aa17.06■□□□□ 0.32
LETMD1-212ENST00000547877 ALAS1P13196 640 aa17.06■□□□□ 0.32
LETMD1-212ENST00000547877 GNA11P29992 359 aa17.06■□□□□ 0.32
LETMD1-212ENST00000547877 STAT3P40763 770 aa17.06■□□□□ 0.32
LETMD1-212ENST00000547877 CCDC173Q0VFZ6 552 aa17.06■□□□□ 0.32
LETMD1-212ENST00000547877 OXER1Q8TDS5 423 aa17.06■□□□□ 0.32
LETMD1-212ENST00000547877 PPP1R9BQ96SB3 815 aa17.06■□□□□ 0.32
LETMD1-212ENST00000547877 PSTPIP2Q9H939 334 aa17.06■□□□□ 0.32
LETMD1-212ENST00000547877 HOMER2Q9NSB8 354 aa17.06■□□□□ 0.32
LETMD1-212ENST00000547877 PCDHA4Q9UN74 947 aa17.06■□□□□ 0.32
LETMD1-212ENST00000547877 ABCB11O95342 1321 aa17.06■□□□□ 0.32
LETMD1-212ENST00000547877 CNMDO75829 334 aa17.05■□□□□ 0.32
LETMD1-212ENST00000547877 KRT2P35908 639 aa17.05■□□□□ 0.32
LETMD1-212ENST00000547877 NASPP49321 788 aaPredicted RBP17.05■□□□□ 0.32
LETMD1-212ENST00000547877 ADCY7P51828 1080 aa17.05■□□□□ 0.32
LETMD1-212ENST00000547877 NR5A1Q13285 461 aa17.05■□□□□ 0.32
LETMD1-212ENST00000547877 GALNT17Q6IS24 598 aa17.05■□□□□ 0.32
LETMD1-212ENST00000547877 GTF3C2Q8WUA4 911 aaPredicted RBP17.05■□□□□ 0.32
LETMD1-212ENST00000547877 BRMS1Q9HCU9 246 aa17.05■□□□□ 0.32
LETMD1-212ENST00000547877 RIC8AQ9NPQ8 531 aa17.05■□□□□ 0.32
LETMD1-212ENST00000547877 MRPL11Q9Y3B7 192 aaKnown RBP17.05■□□□□ 0.32
LETMD1-212ENST00000547877 RABGAP1Q9Y3P9 1069 aa17.05■□□□□ 0.32
LETMD1-212ENST00000547877 KIF28PB7ZC32 967 aa17.04■□□□□ 0.32
LETMD1-212ENST00000547877 BLIDQ8IZY5 108 aa17.04■□□□□ 0.32
LETMD1-212ENST00000547877 DAGLBQ8NCG7 672 aa17.04■□□□□ 0.32
LETMD1-212ENST00000547877 CUL5Q93034 780 aa17.04■□□□□ 0.32
LETMD1-212ENST00000547877 TRERF1Q96PN7 1200 aa17.04■□□□□ 0.32
LETMD1-212ENST00000547877 SPATC1LQ9H0A9 340 aa17.04■□□□□ 0.32
LETMD1-212ENST00000547877 U2AF2P26368 475 aaKnown RBP eCLIP17.04■□□□□ 0.32
LETMD1-212ENST00000547877 GCLCP48506 637 aaPredicted RBP17.04■□□□□ 0.32
LETMD1-212ENST00000547877 VEGFBP49765 207 aa17.04■□□□□ 0.32
LETMD1-212ENST00000547877 GNL2Q13823 731 aaKnown RBP17.04■□□□□ 0.32
LETMD1-212ENST00000547877 TAF1CQ15572 869 aaPredicted RBP17.04■□□□□ 0.32
LETMD1-212ENST00000547877 ANKRD13CQ8N6S4 541 aa17.04■□□□□ 0.32
LETMD1-212ENST00000547877 FOXP1Q9H334 677 aaPredicted RBP17.04■□□□□ 0.32
LETMD1-212ENST00000547877 ELP1O95163 1332 aa17.04■□□□□ 0.32
LETMD1-212ENST00000547877 M0R2N6 131 aa17.03■□□□□ 0.32
LETMD1-212ENST00000547877 NFIBO00712 420 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms