RNA–Protein interactions for RNA: ENST00000547862.6

SSH1-207, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 5

Gene SSH1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-207ENST00000547862 PHF6Q8IWS0 365 aaKnown RBP eCLIP24.06■■□□□ 1.44
SSH1-207ENST00000547862 TOX2Q96NM4 488 aa24.06■■□□□ 1.44
SSH1-207ENST00000547862 SEMA6BQ9H3T3 888 aa24.06■■□□□ 1.44
SSH1-207ENST00000547862 HELLSQ9NRZ9 838 aa24.06■■□□□ 1.44
SSH1-207ENST00000547862 ASTN1O14525 1302 aa24.06■■□□□ 1.44
SSH1-207ENST00000547862 TRIM6-TRIM34B2RNG4 842 aa24.05■■□□□ 1.44
SSH1-207ENST00000547862 TTBK2Q6IQ55 1244 aa24.05■■□□□ 1.44
SSH1-207ENST00000547862 PURBQ96QR8 312 aaKnown RBP24.05■■□□□ 1.44
SSH1-207ENST00000547862 LNPKQ9C0E8 428 aa24.05■■□□□ 1.44
SSH1-207ENST00000547862 GPCPD1Q9NPB8 672 aa24.05■■□□□ 1.44
SSH1-207ENST00000547862 ANAPC4Q9UJX5 808 aa24.05■■□□□ 1.44
SSH1-207ENST00000547862 TBX21Q9UL17 535 aa24.05■■□□□ 1.44
SSH1-207ENST00000547862 ELP1O95163 1332 aa24.05■■□□□ 1.44
SSH1-207ENST00000547862 ASB14A6NK59 587 aa24.04■■□□□ 1.44
SSH1-207ENST00000547862 ORC4O43929 436 aa24.04■■□□□ 1.44
SSH1-207ENST00000547862 TIMP1P01033 207 aa24.04■■□□□ 1.44
SSH1-207ENST00000547862 NMIQ13287 307 aaPredicted RBP24.04■■□□□ 1.44
SSH1-207ENST00000547862 CXCL17Q6UXB2 119 aa24.04■■□□□ 1.44
SSH1-207ENST00000547862 ZNF589Q86UQ0 364 aaPredicted RBP24.04■■□□□ 1.44
SSH1-207ENST00000547862 MAFAQ8NHW3 353 aaPredicted RBP24.04■■□□□ 1.44
SSH1-207ENST00000547862 DCAF4Q8WV16 495 aa24.04■■□□□ 1.44
SSH1-207ENST00000547862 CYP39A1Q9NYL5 469 aa24.04■■□□□ 1.44
SSH1-207ENST00000547862 GBF1Q92538 1859 aa24.04■■□□□ 1.44
SSH1-207ENST00000547862 ARVCFO00192 962 aa24.03■■□□□ 1.44
SSH1-207ENST00000547862 CTAGE5O15320 804 aa24.03■■□□□ 1.44
SSH1-207ENST00000547862 TLR3O15455 904 aaKnown RBP24.03■■□□□ 1.44
SSH1-207ENST00000547862 PLA2G6O60733 806 aa24.03■■□□□ 1.44
SSH1-207ENST00000547862 MCMDC2Q4G0Z9 681 aa24.03■■□□□ 1.44
SSH1-207ENST00000547862 RILPL2Q969X0 211 aa24.03■■□□□ 1.44
SSH1-207ENST00000547862 BUD13Q9BRD0 619 aaKnown RBP eCLIP24.03■■□□□ 1.44
SSH1-207ENST00000547862 PDGFCQ9NRA1 345 aa24.03■■□□□ 1.44
SSH1-207ENST00000547862 FGAP02671 866 aa24.02■■□□□ 1.44
SSH1-207ENST00000547862 FOSL2P15408 326 aa24.02■■□□□ 1.44
SSH1-207ENST00000547862 SYDE2Q5VT97 1194 aa24.02■■□□□ 1.44
SSH1-207ENST00000547862 FAM126BQ8IXS8 530 aa24.02■■□□□ 1.44
SSH1-207ENST00000547862 AP5M1Q9H0R1 490 aa24.02■■□□□ 1.44
SSH1-207ENST00000547862 ICAM1P05362 532 aa24.01■■□□□ 1.43
SSH1-207ENST00000547862 SMPD1P17405 629 aa24.01■■□□□ 1.43
SSH1-207ENST00000547862 CDK7P50613 346 aa24.01■■□□□ 1.43
SSH1-207ENST00000547862 PPIGQ13427 754 aaKnown RBP eCLIP24.01■■□□□ 1.431e-7■■■■■ 29.8
SSH1-207ENST00000547862 ALX1Q15699 326 aa24.01■■□□□ 1.43
SSH1-207ENST00000547862 FSCN1Q16658 493 aaKnown RBP24.01■■□□□ 1.43
SSH1-207ENST00000547862 B4GALNT3Q6L9W6 998 aa24.01■■□□□ 1.43
SSH1-207ENST00000547862 MFSD5Q6N075 450 aa24.01■■□□□ 1.43
SSH1-207ENST00000547862 YTHDC1Q96MU7 727 aaKnown RBP24.01■■□□□ 1.43
SSH1-207ENST00000547862 TMEM47Q9BQJ4 181 aa24.01■■□□□ 1.43
SSH1-207ENST00000547862 RANBP17Q9H2T7 1088 aaKnown RBP24.01■■□□□ 1.43
SSH1-207ENST00000547862 CCDC171Q6TFL3 1326 aa24.01■■□□□ 1.43
SSH1-207ENST00000547862 CDH23Q9H251 3354 aa24.01■■□□□ 1.43
SSH1-207ENST00000547862 CUL9Q8IWT3 2517 aa24■■□□□ 1.43
SSH1-207ENST00000547862 PTPDC1A2A3K4 754 aa24■■□□□ 1.43
SSH1-207ENST00000547862 NFIBO00712 420 aa24■■□□□ 1.43
SSH1-207ENST00000547862 DYNC1LI2O43237 492 aaPredicted RBP24■■□□□ 1.43
SSH1-207ENST00000547862 ACRP10323 421 aa24■■□□□ 1.43
SSH1-207ENST00000547862 HSPD1P10809 573 aaKnown RBP24■■□□□ 1.43
SSH1-207ENST00000547862 TOP1P11387 765 aaKnown RBP24■■□□□ 1.43
SSH1-207ENST00000547862 CSF2RAP15509 400 aa24■■□□□ 1.43
SSH1-207ENST00000547862 DNAJB2P25686 324 aa24■■□□□ 1.43
SSH1-207ENST00000547862 HDAC1Q13547 482 aaPredicted RBP24■■□□□ 1.43
SSH1-207ENST00000547862 TMEM63BQ5T3F8 832 aa24■■□□□ 1.43
SSH1-207ENST00000547862 GNEQ9Y223 722 aaKnown RBP24■■□□□ 1.43
SSH1-207ENST00000547862 MYH6P13533 1939 aa24■■□□□ 1.43
SSH1-207ENST00000547862 CYP2C18P33260 490 aa23.99■■□□□ 1.43
SSH1-207ENST00000547862 BAATQ14032 418 aaPredicted RBP23.99■■□□□ 1.43
SSH1-207ENST00000547862 SLC30A10Q6XR72 485 aa23.99■■□□□ 1.43
SSH1-207ENST00000547862 TBC1D10CQ8IV04 446 aa23.99■■□□□ 1.43
SSH1-207ENST00000547862 COL25A1Q9BXS0 654 aaPredicted RBP23.99■■□□□ 1.43
SSH1-207ENST00000547862 PSMC6P62333 389 aa23.98■■□□□ 1.43
SSH1-207ENST00000547862 KIAA1211Q6ZU35 1233 aa23.98■■□□□ 1.43
SSH1-207ENST00000547862 TMEM199Q8N511 208 aa23.98■■□□□ 1.43
SSH1-207ENST00000547862 HSFX4A0A1B0GTS1 333 aaPredicted RBP23.97■■□□□ 1.43
SSH1-207ENST00000547862 HSFX3A0A1B0GWH4 333 aaPredicted RBP23.97■■□□□ 1.43
SSH1-207ENST00000547862 ZMYM6O95789 1325 aa23.97■■□□□ 1.43
SSH1-207ENST00000547862 FGRP09769 529 aa23.97■■□□□ 1.43
SSH1-207ENST00000547862 CALML3P27482 149 aa23.97■■□□□ 1.43
SSH1-207ENST00000547862 NEDD4P46934 1319 aa23.97■■□□□ 1.43
SSH1-207ENST00000547862 NOVP48745 357 aa23.97■■□□□ 1.43
SSH1-207ENST00000547862 ALDH5A1P51649 535 aaPredicted RBP23.97■■□□□ 1.43
SSH1-207ENST00000547862 ITGA7Q13683 1181 aa23.97■■□□□ 1.43
SSH1-207ENST00000547862 UMODL1Q5DID0 1318 aa23.97■■□□□ 1.43
SSH1-207ENST00000547862 TAPT1Q6NXT6 567 aa23.97■■□□□ 1.43
SSH1-207ENST00000547862 ZKSCAN3Q9BRR0 538 aa23.97■■□□□ 1.43
SSH1-207ENST00000547862 VTA1Q9NP79 307 aa23.97■■□□□ 1.43
SSH1-207ENST00000547862 GRXCR1A8MXD5 290 aa23.96■■□□□ 1.43
SSH1-207ENST00000547862 ZEB2O60315 1214 aa23.96■■□□□ 1.43
SSH1-207ENST00000547862 PDHBP11177 359 aa23.96■■□□□ 1.43
SSH1-207ENST00000547862 TMEM240Q5SV17 173 aa23.96■■□□□ 1.43
SSH1-207ENST00000547862 MFSD6Q6ZSS7 791 aa23.96■■□□□ 1.43
SSH1-207ENST00000547862 TIFAQ96CG3 184 aa23.96■■□□□ 1.43
SSH1-207ENST00000547862 HIPK3Q9H422 1215 aa23.96■■□□□ 1.43
SSH1-207ENST00000547862 TMEM265A0A087WTH1 108 aa23.95■■□□□ 1.42
SSH1-207ENST00000547862 NKX3-2P78367 333 aa23.95■■□□□ 1.42
SSH1-207ENST00000547862 GRIN2CQ14957 1233 aa23.95■■□□□ 1.42
SSH1-207ENST00000547862 AKNAD1Q5T1N1 836 aa23.95■■□□□ 1.42
SSH1-207ENST00000547862 PSRC1Q6PGN9 363 aaPredicted RBP23.95■■□□□ 1.42
SSH1-207ENST00000547862 BTNL9Q6UXG8 535 aa23.95■■□□□ 1.42
SSH1-207ENST00000547862 ZNF365Q70YC5 407 aa23.95■■□□□ 1.42
SSH1-207ENST00000547862 C16orf59Q7L2K0 433 aa23.95■■□□□ 1.42
SSH1-207ENST00000547862 ADD3Q9UEY8 706 aaKnown RBP23.95■■□□□ 1.42
SSH1-207ENST00000547862 PRUNE2Q8WUY3 3088 aa23.95■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms