RNA–Protein interactions for RNA: ENST00000547369.5

GCN1-203, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-203ENST00000547369 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.99■■□□□ 1.11
GCN1-203ENST00000547369 TRIM6-TRIM34B2RNG4 842 aa21.99■■□□□ 1.11
GCN1-203ENST00000547369 ICAM1P05362 532 aa21.99■■□□□ 1.11
GCN1-203ENST00000547369 TOP1P11387 765 aaKnown RBP21.99■■□□□ 1.11
GCN1-203ENST00000547369 TTBK2Q6IQ55 1244 aa21.99■■□□□ 1.11
GCN1-203ENST00000547369 NOL8Q76FK4 1167 aaKnown RBP21.99■■□□□ 1.11
GCN1-203ENST00000547369 ZNF589Q86UQ0 364 aaPredicted RBP21.99■■□□□ 1.11
GCN1-203ENST00000547369 TMEM47Q9BQJ4 181 aa21.99■■□□□ 1.11
GCN1-203ENST00000547369 RANBP17Q9H2T7 1088 aaKnown RBP21.99■■□□□ 1.11
GCN1-203ENST00000547369 TCP11L1Q9NUJ3 509 aa21.99■■□□□ 1.11
GCN1-203ENST00000547369 CYP39A1Q9NYL5 469 aa21.99■■□□□ 1.11
GCN1-203ENST00000547369 TBX21Q9UL17 535 aa21.99■■□□□ 1.11
GCN1-203ENST00000547369 ASTN1O14525 1302 aa21.99■■□□□ 1.11
GCN1-203ENST00000547369 LRRC37A2A6NM11 1700 aa21.98■■□□□ 1.11
GCN1-203ENST00000547369 ARVCFO00192 962 aa21.98■■□□□ 1.11
GCN1-203ENST00000547369 TIMP1P01033 207 aa21.98■■□□□ 1.11
GCN1-203ENST00000547369 SLC16A2P36021 539 aa21.98■■□□□ 1.11
GCN1-203ENST00000547369 AAMPQ13685 434 aa21.98■■□□□ 1.11
GCN1-203ENST00000547369 BTNL9Q6UXG8 535 aa21.98■■□□□ 1.11
GCN1-203ENST00000547369 NSMFQ6X4W1 530 aa21.98■■□□□ 1.11
GCN1-203ENST00000547369 SEMA6BQ9H3T3 888 aa21.98■■□□□ 1.11
GCN1-203ENST00000547369 GNEQ9Y223 722 aaKnown RBP21.98■■□□□ 1.11
GCN1-203ENST00000547369 CCDC171Q6TFL3 1326 aa21.98■■□□□ 1.11
GCN1-203ENST00000547369 LCTP09848 1927 aa21.98■■□□□ 1.11
GCN1-203ENST00000547369 HAND2P61296 217 aa21.97■■□□□ 1.11
GCN1-203ENST00000547369 BEX3Q00994 111 aa21.97■■□□□ 1.11
GCN1-203ENST00000547369 SYDE2Q5VT97 1194 aa21.97■■□□□ 1.11
GCN1-203ENST00000547369 SMC5Q8IY18 1101 aa21.97■■□□□ 1.11
GCN1-203ENST00000547369 RILPL2Q969X0 211 aa21.97■■□□□ 1.11
GCN1-203ENST00000547369 DDX49Q9Y6V7 483 aaKnown RBP21.97■■□□□ 1.11
GCN1-203ENST00000547369 MFSD5Q6N075 450 aa21.96■■□□□ 1.11
GCN1-203ENST00000547369 TLK2Q86UE8 772 aa21.96■■□□□ 1.11
GCN1-203ENST00000547369 CDX2Q99626 313 aaPredicted RBP21.96■■□□□ 1.11
GCN1-203ENST00000547369 GPCPD1Q9NPB8 672 aa21.96■■□□□ 1.11
GCN1-203ENST00000547369 FRMPD2Q68DX3 1309 aaPredicted RBP21.96■■□□□ 1.11
GCN1-203ENST00000547369 CUL9Q8IWT3 2517 aa21.95■■□□□ 1.1
GCN1-203ENST00000547369 PCP11498 1178 aaKnown RBP21.95■■□□□ 1.1
GCN1-203ENST00000547369 SMPD1P17405 629 aa21.95■■□□□ 1.1
GCN1-203ENST00000547369 AKNAD1Q5T1N1 836 aa21.95■■□□□ 1.1
GCN1-203ENST00000547369 IQSEC1Q6DN90 963 aa21.95■■□□□ 1.1
GCN1-203ENST00000547369 B4GALNT3Q6L9W6 998 aa21.95■■□□□ 1.1
GCN1-203ENST00000547369 TAPT1Q6NXT6 567 aa21.95■■□□□ 1.1
GCN1-203ENST00000547369 MFSD6Q6ZSS7 791 aa21.95■■□□□ 1.1
GCN1-203ENST00000547369 EEPD1Q7L9B9 569 aa21.95■■□□□ 1.1
GCN1-203ENST00000547369 FBXO16Q8IX29 292 aaPredicted RBP21.95■■□□□ 1.1
GCN1-203ENST00000547369 FAM126BQ8IXS8 530 aa21.95■■□□□ 1.1
GCN1-203ENST00000547369 PURBQ96QR8 312 aaKnown RBP21.95■■□□□ 1.1
GCN1-203ENST00000547369 AP5M1Q9H0R1 490 aa21.95■■□□□ 1.1
GCN1-203ENST00000547369 TTYH1Q9H313 450 aaPredicted RBP21.95■■□□□ 1.1
GCN1-203ENST00000547369 RWDD1Q9H446 243 aaPredicted RBP21.95■■□□□ 1.1
GCN1-203ENST00000547369 PDGFCQ9NRA1 345 aa21.95■■□□□ 1.1
GCN1-203ENST00000547369 A0A0C4DFX4 3053 aa21.94■■□□□ 1.1
GCN1-203ENST00000547369 TLR3O15455 904 aaKnown RBP21.94■■□□□ 1.1
GCN1-203ENST00000547369 DYNC1LI2O43237 492 aaPredicted RBP21.94■■□□□ 1.1
GCN1-203ENST00000547369 PDHBP11177 359 aa21.94■■□□□ 1.1
GCN1-203ENST00000547369 BAATQ14032 418 aaPredicted RBP21.94■■□□□ 1.1
GCN1-203ENST00000547369 FSCN1Q16658 493 aaKnown RBP21.94■■□□□ 1.1
GCN1-203ENST00000547369 CXCL17Q6UXB2 119 aa21.94■■□□□ 1.1
GCN1-203ENST00000547369 MORC4Q8TE76 937 aa21.94■■□□□ 1.1
GCN1-203ENST00000547369 TTC14Q96N46 770 aa21.94■■□□□ 1.1
GCN1-203ENST00000547369 VTA1Q9NP79 307 aa21.94■■□□□ 1.1
GCN1-203ENST00000547369 CABYRO75952 493 aa21.93■■□□□ 1.1
GCN1-203ENST00000547369 SDSP20132 328 aa21.93■■□□□ 1.1
GCN1-203ENST00000547369 PTGS1P23219 599 aa21.93■■□□□ 1.1
GCN1-203ENST00000547369 MFAP1P55081 439 aaKnown RBP21.93■■□□□ 1.1
GCN1-203ENST00000547369 TBC1D10CQ8IV04 446 aa21.93■■□□□ 1.1
GCN1-203ENST00000547369 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.93■■□□□ 1.19e-16■■■□□ 15
GCN1-203ENST00000547369 ADD3Q9UEY8 706 aaKnown RBP21.93■■□□□ 1.1
GCN1-203ENST00000547369 Q9Y3F1 56 aa21.93■■□□□ 1.1
GCN1-203ENST00000547369 TMEM265A0A087WTH1 108 aa21.92■■□□□ 1.1
GCN1-203ENST00000547369 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.92■■□□□ 1.1
GCN1-203ENST00000547369 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.92■■□□□ 1.1
GCN1-203ENST00000547369 NFIBO00712 420 aa21.92■■□□□ 1.1
GCN1-203ENST00000547369 ZEB2O60315 1214 aa21.92■■□□□ 1.1
GCN1-203ENST00000547369 CD4P01730 458 aa21.92■■□□□ 1.1
GCN1-203ENST00000547369 ZNF543Q08ER8 600 aa21.92■■□□□ 1.1
GCN1-203ENST00000547369 PPIGQ13427 754 aaKnown RBP eCLIP21.92■■□□□ 1.12e-8■■□□□ 14.3
GCN1-203ENST00000547369 KIAA1211Q6ZU35 1233 aa21.92■■□□□ 1.1
GCN1-203ENST00000547369 CHD1LQ86WJ1 897 aa21.92■■□□□ 1.1
GCN1-203ENST00000547369 PLEKHM2Q8IWE5 1019 aa21.92■■□□□ 1.1
GCN1-203ENST00000547369 SLC43A3Q8NBI5 491 aa21.92■■□□□ 1.1
GCN1-203ENST00000547369 PPP1R12CQ9BZL4 782 aa21.92■■□□□ 1.1
GCN1-203ENST00000547369 RNF41Q9H4P4 317 aaPredicted RBP21.92■■□□□ 1.1
GCN1-203ENST00000547369 PTPDC1A2A3K4 754 aa21.91■■□□□ 1.1
GCN1-203ENST00000547369 ALDH5A1P51649 535 aaPredicted RBP21.91■■□□□ 1.1
GCN1-203ENST00000547369 TMEM63BQ5T3F8 832 aa21.91■■□□□ 1.1
GCN1-203ENST00000547369 PHF6Q8IWS0 365 aaKnown RBP eCLIP21.91■■□□□ 1.1
GCN1-203ENST00000547369 TMEM199Q8N511 208 aa21.91■■□□□ 1.1
GCN1-203ENST00000547369 OSBPL3Q9H4L5 887 aa21.91■■□□□ 1.1
GCN1-203ENST00000547369 PNMA2Q9UL42 364 aa21.91■■□□□ 1.1
GCN1-203ENST00000547369 LOC102724159A0A0B4J2E5 919 aa21.9■■□□□ 1.1
GCN1-203ENST00000547369 IGHDP01880 384 aa21.9■■□□□ 1.1
GCN1-203ENST00000547369 SNHG28P0DPA3 235 aa21.9■■□□□ 1.1
GCN1-203ENST00000547369 CSF2RAP15509 400 aa21.9■■□□□ 1.1
GCN1-203ENST00000547369 NUCB1Q02818 461 aa21.9■■□□□ 1.1
GCN1-203ENST00000547369 ITGA7Q13683 1181 aa21.9■■□□□ 1.1
GCN1-203ENST00000547369 PWP2Q15269 919 aaKnown RBP21.9■■□□□ 1.1
GCN1-203ENST00000547369 TMEM240Q5SV17 173 aa21.9■■□□□ 1.1
GCN1-203ENST00000547369 C16orf59Q7L2K0 433 aa21.9■■□□□ 1.1
GCN1-203ENST00000547369 CLEC4DQ8WXI8 215 aa21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms