RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 HYOU1Q9Y4L1 999 aa15.83■□□□□ 0.12
SRP54-202ENST00000546080 CAPN6Q9Y6Q1 641 aa15.83■□□□□ 0.12
SRP54-202ENST00000546080 LRP5O75197 1615 aa15.83■□□□□ 0.12
SRP54-202ENST00000546080 ATXN2Q99700 1313 aaKnown RBP15.82■□□□□ 0.12
SRP54-202ENST00000546080 DDAH1O94760 285 aa15.82■□□□□ 0.12
SRP54-202ENST00000546080 KIAA0754O94854 1291 aa15.82■□□□□ 0.12
SRP54-202ENST00000546080 PRLRP16471 622 aa15.82■□□□□ 0.12
SRP54-202ENST00000546080 TCP1P17987 556 aaKnown RBP15.82■□□□□ 0.12
SRP54-202ENST00000546080 CYP7A1P22680 504 aa15.82■□□□□ 0.12
SRP54-202ENST00000546080 MTIF2P46199 727 aaKnown RBP15.82■□□□□ 0.12
SRP54-202ENST00000546080 MRPS25P82663 173 aaKnown RBP15.82■□□□□ 0.12
SRP54-202ENST00000546080 CDK17Q00537 523 aa15.82■□□□□ 0.12
SRP54-202ENST00000546080 PDCLQ13371 301 aa15.82■□□□□ 0.12
SRP54-202ENST00000546080 TOM1L2Q6ZVM7 507 aa15.82■□□□□ 0.12
SRP54-202ENST00000546080 CNPY4Q8N129 248 aa15.82■□□□□ 0.12
SRP54-202ENST00000546080 ARL8AQ96BM9 186 aa15.82■□□□□ 0.12
SRP54-202ENST00000546080 OSBPL9Q96SU4 736 aa15.82■□□□□ 0.12
SRP54-202ENST00000546080 SH2D4AQ9H788 454 aa15.82■□□□□ 0.12
SRP54-202ENST00000546080 STIM2Q9P246 746 aa15.82■□□□□ 0.12
SRP54-202ENST00000546080 DUOX1Q9NRD9 1551 aa15.82■□□□□ 0.12
SRP54-202ENST00000546080 SMIM22K7EJ46 135 aa15.82■□□□□ 0.12
SRP54-202ENST00000546080 RHOBTB3O94955 611 aa15.82■□□□□ 0.12
SRP54-202ENST00000546080 STARD3NLO95772 234 aa15.82■□□□□ 0.12
SRP54-202ENST00000546080 SCG2P13521 617 aa15.82■□□□□ 0.12
SRP54-202ENST00000546080 KCNV1Q6PIU1 500 aa15.82■□□□□ 0.12
SRP54-202ENST00000546080 KRT26Q7Z3Y9 468 aa15.82■□□□□ 0.12
SRP54-202ENST00000546080 FAM114A1Q8IWE2 563 aa15.82■□□□□ 0.12
SRP54-202ENST00000546080 GIMAP8Q8ND71 665 aaPredicted RBP15.82■□□□□ 0.12
SRP54-202ENST00000546080 CAVIN3Q969G5 261 aa15.82■□□□□ 0.12
SRP54-202ENST00000546080 CNOT6LQ96LI5 555 aaKnown RBP15.82■□□□□ 0.12
SRP54-202ENST00000546080 ALS2CR12Q96Q35 445 aa15.82■□□□□ 0.12
SRP54-202ENST00000546080 IFIH1Q9BYX4 1025 aaKnown RBP15.82■□□□□ 0.12
SRP54-202ENST00000546080 MLXIPQ9HAP2 919 aa15.82■□□□□ 0.12
SRP54-202ENST00000546080 A0A1W2PQJ5 194 aa15.81■□□□□ 0.12
SRP54-202ENST00000546080 ZNF263O14978 683 aa15.81■□□□□ 0.12
SRP54-202ENST00000546080 KLRC4O43908 158 aa15.81■□□□□ 0.12
SRP54-202ENST00000546080 MOCS3O95396 460 aa15.81■□□□□ 0.12
SRP54-202ENST00000546080 MYL1P05976 194 aa15.81■□□□□ 0.12
SRP54-202ENST00000546080 PAFAH1B1P43034 410 aa15.81■□□□□ 0.12
SRP54-202ENST00000546080 SETQ01105 290 aaPredicted RBP15.81■□□□□ 0.12
SRP54-202ENST00000546080 HAUS3Q68CZ6 603 aa15.81■□□□□ 0.12
SRP54-202ENST00000546080 SRBD1Q8N5C6 995 aaKnown RBP15.81■□□□□ 0.12
SRP54-202ENST00000546080 DHTKD1Q96HY7 919 aaPredicted RBP15.81■□□□□ 0.12
SRP54-202ENST00000546080 DUSP9Q99956 384 aaKnown RBP15.81■□□□□ 0.12
SRP54-202ENST00000546080 TMOD3Q9NYL9 352 aa15.81■□□□□ 0.12
SRP54-202ENST00000546080 CAPN7Q9Y6W3 813 aa15.81■□□□□ 0.12
SRP54-202ENST00000546080 MAGEB6P1A0A0J9YX57 407 aa15.8■□□□□ 0.12
SRP54-202ENST00000546080 BICDL2A1A5D9 508 aa15.8■□□□□ 0.12
SRP54-202ENST00000546080 TNFRSF8P28908 595 aa15.8■□□□□ 0.12
SRP54-202ENST00000546080 BCAMP50895 628 aa15.8■□□□□ 0.12
SRP54-202ENST00000546080 NAALADL2Q58DX5 795 aa15.8■□□□□ 0.12
SRP54-202ENST00000546080 FIGNQ5HY92 759 aa15.8■□□□□ 0.12
SRP54-202ENST00000546080 C8orf74Q6P047 294 aa15.8■□□□□ 0.12
SRP54-202ENST00000546080 NFRKBQ6P4R8 1299 aa15.8■□□□□ 0.12
SRP54-202ENST00000546080 SPATS2Q86XZ4 545 aaKnown RBP15.8■□□□□ 0.12
SRP54-202ENST00000546080 OTUD6BQ8N6M0 293 aa15.8■□□□□ 0.12
SRP54-202ENST00000546080 PSMB7Q99436 277 aa15.8■□□□□ 0.12
SRP54-202ENST00000546080 NOC4LQ9BVI4 516 aaKnown RBP15.8■□□□□ 0.12
SRP54-202ENST00000546080 PCDHA13Q9Y5I0 950 aa15.8■□□□□ 0.12
SRP54-202ENST00000546080 H0YHG0 523 aa15.8■□□□□ 0.12
SRP54-202ENST00000546080 PLEKP08567 350 aaPredicted RBP15.8■□□□□ 0.12
SRP54-202ENST00000546080 SEMA3FQ13275 785 aa15.8■□□□□ 0.12
SRP54-202ENST00000546080 NNTQ13423 1086 aa15.8■□□□□ 0.12
SRP54-202ENST00000546080 FKBP15Q5T1M5 1219 aa15.8■□□□□ 0.12
SRP54-202ENST00000546080 TYW1BQ6NUM6 668 aa15.8■□□□□ 0.12
SRP54-202ENST00000546080 DTHD1Q6ZMT9 781 aa15.8■□□□□ 0.12
SRP54-202ENST00000546080 C4orf32Q8N8J7 132 aa15.8■□□□□ 0.12
SRP54-202ENST00000546080 PRPF38AQ8NAV1 312 aaKnown RBP15.8■□□□□ 0.12
SRP54-202ENST00000546080 P2RX5Q93086 422 aa15.8■□□□□ 0.12
SRP54-202ENST00000546080 EEF2KMTQ96G04 330 aa15.8■□□□□ 0.12
SRP54-202ENST00000546080 ZIM3Q96PE6 472 aa15.8■□□□□ 0.12
SRP54-202ENST00000546080 COL22A1Q8NFW1 1626 aaPredicted RBP15.79■□□□□ 0.12
SRP54-202ENST00000546080 CXCR5P32302 372 aa15.79■□□□□ 0.12
SRP54-202ENST00000546080 ATP1A2P50993 1020 aa15.79■□□□□ 0.12
SRP54-202ENST00000546080 ADGRA1Q86SQ6 560 aa15.79■□□□□ 0.12
SRP54-202ENST00000546080 CCDC47Q96A33 483 aaKnown RBP15.79■□□□□ 0.12
SRP54-202ENST00000546080 IQCDQ96DY2 449 aa15.79■□□□□ 0.12
SRP54-202ENST00000546080 SMARCAL1Q9NZC9 954 aa15.79■□□□□ 0.12
SRP54-202ENST00000546080 PP2D1A8MPX8 630 aa15.79■□□□□ 0.12
SRP54-202ENST00000546080 ADAMTS3O15072 1205 aa15.79■□□□□ 0.12
SRP54-202ENST00000546080 CCNE1P24864 410 aa15.79■□□□□ 0.12
SRP54-202ENST00000546080 CALML3P27482 149 aa15.79■□□□□ 0.12
SRP54-202ENST00000546080 UBA7P41226 1012 aa15.79■□□□□ 0.12
SRP54-202ENST00000546080 KIF11P52732 1056 aa15.79■□□□□ 0.12
SRP54-202ENST00000546080 PFKFB3Q16875 520 aaPredicted RBP15.79■□□□□ 0.12
SRP54-202ENST00000546080 MICALCLQ6ZW33 695 aa15.79■□□□□ 0.12
SRP54-202ENST00000546080 SH2D3CQ8N5H7 860 aa15.79■□□□□ 0.12
SRP54-202ENST00000546080 ERGIC2Q96RQ1 377 aa15.79■□□□□ 0.12
SRP54-202ENST00000546080 PLIN2Q99541 437 aa15.79■□□□□ 0.12
SRP54-202ENST00000546080 EHD2Q9NZN4 543 aa15.79■□□□□ 0.12
SRP54-202ENST00000546080 ANKRD36CQ5JPF3 1778 aa15.78■□□□□ 0.12
SRP54-202ENST00000546080 CYP2D7A0A087X1C5 515 aa15.78■□□□□ 0.12
SRP54-202ENST00000546080 ZEB2O60315 1214 aa15.78■□□□□ 0.12
SRP54-202ENST00000546080 GSCP56915 257 aaPredicted RBP15.78■□□□□ 0.12
SRP54-202ENST00000546080 MIIPQ5JXC2 388 aa15.78■□□□□ 0.12
SRP54-202ENST00000546080 KCTD16Q68DU8 428 aa15.78■□□□□ 0.12
SRP54-202ENST00000546080 C2CD5Q86YS7 1000 aa15.78■□□□□ 0.12
SRP54-202ENST00000546080 BLIDQ8IZY5 108 aa15.78■□□□□ 0.12
SRP54-202ENST00000546080 KBTBD4Q9NVX7 518 aa15.78■□□□□ 0.12
SRP54-202ENST00000546080 MEFVO15553 781 aaPredicted RBP15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms