RNA–Protein interactions for RNA: ENST00000546006.5

CCDC189-212, Transcript of coiled-coil domain containing 189, humanhuman

TSL 2

Gene CCDC189, Length 1,533 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189-212ENST00000546006 COA7Q96BR5 231 aa21.4■■□□□ 1.02
CCDC189-212ENST00000546006 DDX11Q96FC9 970 aa21.4■■□□□ 1.02
CCDC189-212ENST00000546006 TRERF1Q96PN7 1200 aa21.4■■□□□ 1.02
CCDC189-212ENST00000546006 HOMER2Q9NSB8 354 aa21.4■■□□□ 1.02
CCDC189-212ENST00000546006 RNF146Q9NTX7 359 aa21.4■■□□□ 1.02
CCDC189-212ENST00000546006 FDPSP14324 419 aaKnown RBP21.39■■□□□ 1.02
CCDC189-212ENST00000546006 MAPK4P31152 587 aa21.39■■□□□ 1.02
CCDC189-212ENST00000546006 LACTBP83111 547 aaPredicted RBP21.39■■□□□ 1.02
CCDC189-212ENST00000546006 TSHZ2Q9NRE2 1034 aa21.39■■□□□ 1.02
CCDC189-212ENST00000546006 FBXO40Q9UH90 709 aa21.39■■□□□ 1.02
CCDC189-212ENST00000546006 MRPL11Q9Y3B7 192 aaKnown RBP21.39■■□□□ 1.02
CCDC189-212ENST00000546006 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.39■■□□□ 1.02
CCDC189-212ENST00000546006 FKTNO75072 461 aa21.39■■□□□ 1.01
CCDC189-212ENST00000546006 HMGN5P82970 282 aaKnown RBP21.39■■□□□ 1.01
CCDC189-212ENST00000546006 ZNF296Q8WUU4 475 aaPredicted RBP21.39■■□□□ 1.01
CCDC189-212ENST00000546006 WASF1Q92558 559 aa21.39■■□□□ 1.01
CCDC189-212ENST00000546006 ACAD9Q9H845 621 aa21.39■■□□□ 1.01
CCDC189-212ENST00000546006 BARHL2Q9NY43 387 aa21.39■■□□□ 1.01
CCDC189-212ENST00000546006 SMCHD1A6NHR9 2005 aa21.38■■□□□ 1.01
CCDC189-212ENST00000546006 STXBP3O00186 592 aa21.38■■□□□ 1.01
CCDC189-212ENST00000546006 BECN1Q14457 450 aa21.38■■□□□ 1.01
CCDC189-212ENST00000546006 MUM1L1Q5H9M0 696 aa21.38■■□□□ 1.01
CCDC189-212ENST00000546006 WDR78Q5VTH9 848 aa21.38■■□□□ 1.01
CCDC189-212ENST00000546006 CLEC4DQ8WXI8 215 aa21.38■■□□□ 1.01
CCDC189-212ENST00000546006 FOXN1O15353 648 aa21.37■■□□□ 1.01
CCDC189-212ENST00000546006 FCGRTP55899 365 aa21.37■■□□□ 1.01
CCDC189-212ENST00000546006 KIF22Q14807 665 aa21.37■■□□□ 1.01
CCDC189-212ENST00000546006 PPP1R18Q6NYC8 613 aa21.37■■□□□ 1.01
CCDC189-212ENST00000546006 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.37■■□□□ 1.01
CCDC189-212ENST00000546006 GPR142Q7Z601 462 aa21.37■■□□□ 1.01
CCDC189-212ENST00000546006 PLEKHH3Q7Z736 793 aa21.37■■□□□ 1.01
CCDC189-212ENST00000546006 INTS4Q96HW7 963 aaKnown RBP21.37■■□□□ 1.01
CCDC189-212ENST00000546006 CWC22Q9HCG8 908 aaKnown RBP21.37■■□□□ 1.01
CCDC189-212ENST00000546006 NFIBO00712 420 aa21.36■■□□□ 1.01
CCDC189-212ENST00000546006 ECM2O94769 699 aaPredicted RBP21.36■■□□□ 1.01
CCDC189-212ENST00000546006 CTGFP29279 349 aa21.36■■□□□ 1.01
CCDC189-212ENST00000546006 PSMC4P43686 418 aa21.36■■□□□ 1.01
CCDC189-212ENST00000546006 NAPAP54920 295 aa21.36■■□□□ 1.01
CCDC189-212ENST00000546006 TYW1BQ6NUM6 668 aa21.36■■□□□ 1.01
CCDC189-212ENST00000546006 ERO1AQ96HE7 468 aa21.36■■□□□ 1.01
CCDC189-212ENST00000546006 AIFM3Q96NN9 605 aa21.36■■□□□ 1.01
CCDC189-212ENST00000546006 ARHGAP39Q9C0H5 1083 aa21.36■■□□□ 1.01
CCDC189-212ENST00000546006 OPLAHO14841 1288 aa21.35■■□□□ 1.01
CCDC189-212ENST00000546006 HSPA8P11142 646 aaKnown RBP21.35■■□□□ 1.01
CCDC189-212ENST00000546006 MCF2L2Q86YR7 1114 aa21.35■■□□□ 1.01
CCDC189-212ENST00000546006 FAM184AQ8NB25 1140 aa21.35■■□□□ 1.01
CCDC189-212ENST00000546006 CD99L2Q8TCZ2 262 aa21.35■■□□□ 1.01
CCDC189-212ENST00000546006 MMP19Q99542 508 aa21.35■■□□□ 1.01
CCDC189-212ENST00000546006 ALG1Q9BT22 464 aa21.35■■□□□ 1.01
CCDC189-212ENST00000546006 SH3GLB2Q9NR46 395 aa21.35■■□□□ 1.01
CCDC189-212ENST00000546006 VPS54Q9P1Q0 977 aa21.35■■□□□ 1.01
CCDC189-212ENST00000546006 SMC3Q9UQE7 1217 aa21.35■■□□□ 1.01
CCDC189-212ENST00000546006 TNPO2O14787 897 aaKnown RBP21.34■■□□□ 1.01
CCDC189-212ENST00000546006 STRNO43815 780 aa21.34■■□□□ 1.01
CCDC189-212ENST00000546006 FCER1AP12319 257 aa21.34■■□□□ 1.01
CCDC189-212ENST00000546006 PTPREP23469 700 aa21.34■■□□□ 1.01
CCDC189-212ENST00000546006 RGS22Q8NE09 1264 aa21.34■■□□□ 1.01
CCDC189-212ENST00000546006 CCDC12Q8WUD4 166 aaPredicted RBP21.34■■□□□ 1.01
CCDC189-212ENST00000546006 TRIM47Q96LD4 638 aa21.34■■□□□ 1.01
CCDC189-212ENST00000546006 MAF1Q9H063 256 aa21.34■■□□□ 1.01
CCDC189-212ENST00000546006 IVNS1ABPQ9Y6Y0 642 aa21.34■■□□□ 1.01
CCDC189-212ENST00000546006 GJB2P29033 226 aa21.34■■□□□ 1.01
CCDC189-212ENST00000546006 ANP32AP39687 249 aaKnown RBP21.34■■□□□ 1.01
CCDC189-212ENST00000546006 CTCFP49711 727 aaPredicted RBP21.34■■□□□ 1.01
CCDC189-212ENST00000546006 CAP1Q01518 475 aa21.34■■□□□ 1.01
CCDC189-212ENST00000546006 KCTD2Q14681 263 aa21.34■■□□□ 1.01
CCDC189-212ENST00000546006 ABRAQ8N0Z2 381 aa21.34■■□□□ 1.01
CCDC189-212ENST00000546006 FAM177A1Q8N128 213 aaPredicted RBP21.34■■□□□ 1.01
CCDC189-212ENST00000546006 ANKRD35Q8N283 1001 aa21.34■■□□□ 1.01
CCDC189-212ENST00000546006 CCDC148Q8NFR7 591 aa21.34■■□□□ 1.01
CCDC189-212ENST00000546006 SHISA4Q96DD7 197 aa21.34■■□□□ 1.01
CCDC189-212ENST00000546006 A1CFQ9NQ94 594 aaKnown RBP21.34■■□□□ 1.01
CCDC189-212ENST00000546006 XBP1P17861 261 aa21.33■■□□□ 1
CCDC189-212ENST00000546006 GHRHRQ02643 423 aa21.33■■□□□ 1
CCDC189-212ENST00000546006 GRB14Q14449 540 aa21.33■■□□□ 1
CCDC189-212ENST00000546006 NSMFQ6X4W1 530 aa21.33■■□□□ 1
CCDC189-212ENST00000546006 RNF207Q6ZRF8 634 aa21.33■■□□□ 1
CCDC189-212ENST00000546006 SAMD3Q8N6K7 520 aa21.33■■□□□ 1
CCDC189-212ENST00000546006 PSTPIP2Q9H939 334 aa21.33■■□□□ 1
CCDC189-212ENST00000546006 CYP39A1Q9NYL5 469 aa21.33■■□□□ 1
CCDC189-212ENST00000546006 KIF3AQ9Y496 699 aa21.33■■□□□ 1
CCDC189-212ENST00000546006 RBM19Q9Y4C8 960 aaKnown RBP21.33■■□□□ 1
CCDC189-212ENST00000546006 PFASO15067 1338 aa21.33■■□□□ 1
CCDC189-212ENST00000546006 ESYT2A0FGR8 921 aa21.32■■□□□ 1
CCDC189-212ENST00000546006 SMCO2A6NFE2 343 aa21.32■■□□□ 1
CCDC189-212ENST00000546006 SLC15A5A6NIM6 579 aa21.32■■□□□ 1
CCDC189-212ENST00000546006 MGAMO43451 1857 aa21.32■■□□□ 1
CCDC189-212ENST00000546006 HSP90AA1P07900 732 aaKnown RBP21.32■■□□□ 1
CCDC189-212ENST00000546006 ARHGEF6Q15052 776 aa21.32■■□□□ 1
CCDC189-212ENST00000546006 TBC1D5Q92609 795 aa21.32■■□□□ 1
CCDC189-212ENST00000546006 ZMYND12Q9H0C1 365 aa21.32■■□□□ 1
CCDC189-212ENST00000546006 FOXD4L1Q9NU39 408 aa21.32■■□□□ 1
CCDC189-212ENST00000546006 CFBP00751 764 aa21.31■■□□□ 1
CCDC189-212ENST00000546006 ADORA2AP29274 412 aa21.31■■□□□ 1
CCDC189-212ENST00000546006 ADCY7P51828 1080 aa21.31■■□□□ 1
CCDC189-212ENST00000546006 RPS6P62753 249 aaKnown RBP21.31■■□□□ 1
CCDC189-212ENST00000546006 BAATQ14032 418 aaPredicted RBP21.31■■□□□ 1
CCDC189-212ENST00000546006 MORN1Q5T089 497 aa21.31■■□□□ 1
CCDC189-212ENST00000546006 CUL5Q93034 780 aa21.31■■□□□ 1
CCDC189-212ENST00000546006 GLT8D2Q9H1C3 349 aa21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms