RNA–Protein interactions for RNA: ENST00000545868.4

GABRB3-205, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 1,267 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-205ENST00000545868 RCAN3Q9UKA8 241 aa11.52□□□□□ -0.57
GABRB3-205ENST00000545868 DIS3Q9Y2L1 958 aaKnown RBP11.52□□□□□ -0.57
GABRB3-205ENST00000545868 NCOR1O75376 2440 aa11.52□□□□□ -0.57
GABRB3-205ENST00000545868 MYH7BA7E2Y1 1941 aa11.52□□□□□ -0.57
GABRB3-205ENST00000545868 KIAA1217Q5T5P2 1943 aa11.52□□□□□ -0.57
GABRB3-205ENST00000545868 TET1Q8NFU7 2136 aa11.51□□□□□ -0.57
GABRB3-205ENST00000545868 DNAJC25-GNG10A0A024R161 153 aa11.51□□□□□ -0.57
GABRB3-205ENST00000545868 MYADML2A6NDP7 307 aa11.51□□□□□ -0.57
GABRB3-205ENST00000545868 F5H6K3 240 aa11.51□□□□□ -0.57
GABRB3-205ENST00000545868 RAD21O60216 631 aa11.51□□□□□ -0.57
GABRB3-205ENST00000545868 SNAI1O95863 264 aaPredicted RBP11.51□□□□□ -0.57
GABRB3-205ENST00000545868 RARBP10826 455 aa11.51□□□□□ -0.57
GABRB3-205ENST00000545868 KLRC3Q07444 240 aa11.51□□□□□ -0.57
GABRB3-205ENST00000545868 SNRNP48Q6IEG0 339 aaKnown RBP11.51□□□□□ -0.57
GABRB3-205ENST00000545868 AMOTL1Q8IY63 956 aa11.51□□□□□ -0.57
GABRB3-205ENST00000545868 SLF1Q9BQI6 1058 aa11.51□□□□□ -0.57
GABRB3-205ENST00000545868 ECHDC1Q9NTX5 307 aa11.51□□□□□ -0.57
GABRB3-205ENST00000545868 NYAP2Q9P242 653 aa11.51□□□□□ -0.57
GABRB3-205ENST00000545868 SYNRGQ9UMZ2 1314 aa11.51□□□□□ -0.57
GABRB3-205ENST00000545868 PLIN4Q96Q06 1357 aa11.51□□□□□ -0.57
GABRB3-205ENST00000545868 TANC1Q9C0D5 1861 aa11.51□□□□□ -0.57
GABRB3-205ENST00000545868 SCN10AQ9Y5Y9 1956 aa11.5□□□□□ -0.57
GABRB3-205ENST00000545868 MINDY4BA8MYZ0 360 aa11.5□□□□□ -0.57
GABRB3-205ENST00000545868 GPAA1O43292 621 aa11.5□□□□□ -0.57
GABRB3-205ENST00000545868 PRDM1O75626 825 aa11.5□□□□□ -0.57
GABRB3-205ENST00000545868 CLTBP09497 229 aa11.5□□□□□ -0.57
GABRB3-205ENST00000545868 AKR1A1P14550 325 aa11.5□□□□□ -0.57
GABRB3-205ENST00000545868 KCTD2Q14681 263 aa11.5□□□□□ -0.57
GABRB3-205ENST00000545868 ZNF697Q5TEC3 545 aa11.5□□□□□ -0.57
GABRB3-205ENST00000545868 CCSAPQ6IQ19 270 aaPredicted RBP11.5□□□□□ -0.57
GABRB3-205ENST00000545868 ZSCAN25Q6NSZ9 544 aa11.5□□□□□ -0.57
GABRB3-205ENST00000545868 GIMAP6Q6P9H5 292 aa11.5□□□□□ -0.57
GABRB3-205ENST00000545868 MAMDC4Q6UXC1 1216 aa11.5□□□□□ -0.57
GABRB3-205ENST00000545868 KLHDC9Q8NEP7 349 aa11.5□□□□□ -0.57
GABRB3-205ENST00000545868 APPBP2Q92624 585 aa11.5□□□□□ -0.57
GABRB3-205ENST00000545868 SEC62Q99442 399 aaKnown RBP11.5□□□□□ -0.57
GABRB3-205ENST00000545868 CDX2Q99626 313 aaPredicted RBP11.5□□□□□ -0.57
GABRB3-205ENST00000545868 COL25A1Q9BXS0 654 aaPredicted RBP11.5□□□□□ -0.57
GABRB3-205ENST00000545868 TEX13BQ9BXU2 312 aa11.5□□□□□ -0.57
GABRB3-205ENST00000545868 TCF20Q9UGU0 1960 aaKnown RBP11.49□□□□□ -0.57
GABRB3-205ENST00000545868 SMAPO00193 183 aa11.49□□□□□ -0.57
GABRB3-205ENST00000545868 ARHGAP33O14559 1287 aa11.49□□□□□ -0.57
GABRB3-205ENST00000545868 ATP2A1O14983 1001 aa11.49□□□□□ -0.57
GABRB3-205ENST00000545868 KIAA0355O15063 1070 aa11.49□□□□□ -0.57
GABRB3-205ENST00000545868 FOXP2O15409 715 aa11.49□□□□□ -0.57
GABRB3-205ENST00000545868 RNF113AO15541 343 aaKnown RBP11.49□□□□□ -0.57
GABRB3-205ENST00000545868 PQBP1O60828 265 aaKnown RBP11.49□□□□□ -0.57
GABRB3-205ENST00000545868 DNAJB2P25686 324 aa11.49□□□□□ -0.57
GABRB3-205ENST00000545868 EMP3P54852 163 aa11.49□□□□□ -0.57
GABRB3-205ENST00000545868 FAAP100Q0VG06 881 aa11.49□□□□□ -0.57
GABRB3-205ENST00000545868 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.49□□□□□ -0.57
GABRB3-205ENST00000545868 MARVELD3Q96A59 401 aa11.49□□□□□ -0.57
GABRB3-205ENST00000545868 CEP95Q96GE4 821 aa11.49□□□□□ -0.57
GABRB3-205ENST00000545868 SEMA6BQ9H3T3 888 aa11.49□□□□□ -0.57
GABRB3-205ENST00000545868 DCTPP1Q9H773 170 aa11.49□□□□□ -0.57
GABRB3-205ENST00000545868 SLC38A10Q9HBR0 1119 aa11.49□□□□□ -0.57
GABRB3-205ENST00000545868 SYNGAP1Q96PV0 1343 aa11.49□□□□□ -0.57
GABRB3-205ENST00000545868 XIRP2A4UGR9 3374 aa11.48□□□□□ -0.57
GABRB3-205ENST00000545868 COPB2P35606 906 aa11.48□□□□□ -0.57
GABRB3-205ENST00000545868 ACLYP53396 1101 aa11.48□□□□□ -0.57
GABRB3-205ENST00000545868 SMAD3P84022 425 aaKnown RBP11.48□□□□□ -0.57
GABRB3-205ENST00000545868 RASGRP2Q7LDG7 609 aa11.48□□□□□ -0.57
GABRB3-205ENST00000545868 ANKRD33Q7Z3H0 272 aa11.48□□□□□ -0.57
GABRB3-205ENST00000545868 RNF180Q86T96 592 aa11.48□□□□□ -0.57
GABRB3-205ENST00000545868 CPXCR1Q8N123 301 aa11.48□□□□□ -0.57
GABRB3-205ENST00000545868 LRRC47Q8N1G4 583 aaKnown RBP11.48□□□□□ -0.57
GABRB3-205ENST00000545868 PRPF38AQ8NAV1 312 aaKnown RBP11.48□□□□□ -0.57
GABRB3-205ENST00000545868 OTUD7AQ8TE49 926 aaPredicted RBP11.48□□□□□ -0.57
GABRB3-205ENST00000545868 MYLIPQ8WY64 445 aa11.48□□□□□ -0.57
GABRB3-205ENST00000545868 MKL1Q969V6 931 aa11.48□□□□□ -0.57
GABRB3-205ENST00000545868 KATNBL1Q9H079 304 aa11.48□□□□□ -0.57
GABRB3-205ENST00000545868 TMEM134Q9H6X4 195 aa11.48□□□□□ -0.57
GABRB3-205ENST00000545868 MKNK2Q9HBH9 465 aa11.48□□□□□ -0.57
GABRB3-205ENST00000545868 RAVER2Q9HCJ3 691 aaKnown RBP11.48□□□□□ -0.57
GABRB3-205ENST00000545868 MTMR4Q9NYA4 1195 aa11.48□□□□□ -0.57
GABRB3-205ENST00000545868 KIAA1468Q9P260 1216 aa11.48□□□□□ -0.57
GABRB3-205ENST00000545868 CLIP2Q9UDT6 1046 aa11.48□□□□□ -0.57
GABRB3-205ENST00000545868 TACC3Q9Y6A5 838 aa11.48□□□□□ -0.57
GABRB3-205ENST00000545868 ASTN1O14525 1302 aa11.47□□□□□ -0.57
GABRB3-205ENST00000545868 ZNF536O15090 1300 aa11.47□□□□□ -0.57
GABRB3-205ENST00000545868 CTAGE5O15320 804 aa11.47□□□□□ -0.57
GABRB3-205ENST00000545868 PTGS1P23219 599 aa11.47□□□□□ -0.57
GABRB3-205ENST00000545868 KCNA10Q16322 511 aa11.47□□□□□ -0.57
GABRB3-205ENST00000545868 IFNL3Q8IZI9 196 aa11.47□□□□□ -0.57
GABRB3-205ENST00000545868 MSL3Q8N5Y2 521 aaKnown RBP11.47□□□□□ -0.57
GABRB3-205ENST00000545868 GMCL1P1Q8NEA9 526 aa11.47□□□□□ -0.57
GABRB3-205ENST00000545868 PI4K2BQ8TCG2 481 aa11.47□□□□□ -0.57
GABRB3-205ENST00000545868 TSEN34Q9BSV6 310 aaKnown RBP11.47□□□□□ -0.57
GABRB3-205ENST00000545868 SLC4A5Q9BY07 1137 aa11.47□□□□□ -0.57
GABRB3-205ENST00000545868 CHMP4BQ9H444 224 aaKnown RBP11.47□□□□□ -0.57
GABRB3-205ENST00000545868 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.47□□□□□ -0.57
GABRB3-205ENST00000545868 ZHX1Q9UKY1 873 aaPredicted RBP11.47□□□□□ -0.57
GABRB3-205ENST00000545868 TBX21Q9UL17 535 aa11.47□□□□□ -0.57
GABRB3-205ENST00000545868 CNPY2Q9Y2B0 182 aa11.47□□□□□ -0.57
GABRB3-205ENST00000545868 DDX49Q9Y6V7 483 aaKnown RBP11.47□□□□□ -0.57
GABRB3-205ENST00000545868 PATL2C9JE40 543 aaKnown RBP11.46□□□□□ -0.57
GABRB3-205ENST00000545868 DUSP11O75319 330 aaKnown RBP11.46□□□□□ -0.57
GABRB3-205ENST00000545868 CST5P28325 142 aaPredicted RBP11.46□□□□□ -0.57
GABRB3-205ENST00000545868 SLC4A3P48751 1232 aa11.46□□□□□ -0.57
GABRB3-205ENST00000545868 TDO2P48775 406 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms