RNA–Protein interactions for RNA: ENST00000545621.5

HMBS-222, Transcript of hydroxymethylbilane synthase, human

TSL 1 (best)

Gene HMBS, Length 1,282 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HMBS-222	ENST00000545621	PFAS	O15067	1338 aa		18.63	■□□□□ 0.57
HMBS-222	ENST00000545621	CCDC69	A6NI79	296 aa		18.62	■□□□□ 0.57
HMBS-222	ENST00000545621	EIF5B	O60841	1220 aa	Known RBP	18.62	■□□□□ 0.57
HMBS-222	ENST00000545621	MYC	P01106	439 aa	Predicted RBP	18.62	■□□□□ 0.57
HMBS-222	ENST00000545621	CALM1	P0DP23	149 aa		18.62	■□□□□ 0.57
HMBS-222	ENST00000545621	CALM2	P0DP24	149 aa		18.62	■□□□□ 0.57
HMBS-222	ENST00000545621	CALM3	P0DP25	149 aa		18.62	■□□□□ 0.57
HMBS-222	ENST00000545621	CYBA	P13498	195 aa		18.62	■□□□□ 0.57
HMBS-222	ENST00000545621	TAL1	P17542	331 aa	Predicted RBP	18.62	■□□□□ 0.57
HMBS-222	ENST00000545621	PSMA5	P28066	241 aa		18.62	■□□□□ 0.57
HMBS-222	ENST00000545621	SLC4A3	P48751	1232 aa		18.62	■□□□□ 0.57
HMBS-222	ENST00000545621	QRICH1	Q2TAL8	776 aa		18.62	■□□□□ 0.57
HMBS-222	ENST00000545621	APOA5	Q6Q788	366 aa		18.62	■□□□□ 0.57
HMBS-222	ENST00000545621	IL17RA	Q96F46	866 aa		18.62	■□□□□ 0.57
HMBS-222	ENST00000545621	TCEANC2	Q96MN5	208 aa		18.62	■□□□□ 0.57
HMBS-222	ENST00000545621	TINF2	Q9BSI4	451 aa		18.62	■□□□□ 0.57
HMBS-222	ENST00000545621	MYL10	Q9BUA6	226 aa		18.62	■□□□□ 0.57
HMBS-222	ENST00000545621	SPZ1	Q9BXG8	430 aa		18.62	■□□□□ 0.57
HMBS-222	ENST00000545621	TM6SF1	Q9BZW5	370 aa		18.62	■□□□□ 0.57
HMBS-222	ENST00000545621	CYP39A1	Q9NYL5	469 aa		18.62	■□□□□ 0.57
HMBS-222	ENST00000545621	SYNGAP1	Q96PV0	1343 aa		18.61	■□□□□ 0.57
HMBS-222	ENST00000545621	NFIB	O00712	420 aa		18.61	■□□□□ 0.57
HMBS-222	ENST00000545621	SGPL1	O95470	568 aa		18.61	■□□□□ 0.57
HMBS-222	ENST00000545621	EN2	P19622	333 aa	Predicted RBP	18.61	■□□□□ 0.57
HMBS-222	ENST00000545621	RPS6KB1	P23443	525 aa		18.61	■□□□□ 0.57
HMBS-222	ENST00000545621	KIF5B	P33176	963 aa		18.61	■□□□□ 0.57
HMBS-222	ENST00000545621	CYP2C19	P33261	490 aa		18.61	■□□□□ 0.57
HMBS-222	ENST00000545621	RCAN1	P53805	252 aa		18.61	■□□□□ 0.57
HMBS-222	ENST00000545621	BLOC1S2	Q6QNY1	142 aa		18.61	■□□□□ 0.57
HMBS-222	ENST00000545621	CTCFL	Q8NI51	663 aa	Predicted RBP	18.61	■□□□□ 0.57
HMBS-222	ENST00000545621	U2AF1L4	Q8WU68	220 aa	Known RBP	18.61	■□□□□ 0.57
HMBS-222	ENST00000545621	NUP133	Q8WUM0	1156 aa		18.61	■□□□□ 0.57
HMBS-222	ENST00000545621	ZSWIM6	Q9HCJ5	1215 aa		18.61	■□□□□ 0.57
HMBS-222	ENST00000545621	NRBP1	Q9UHY1	535 aa		18.61	■□□□□ 0.57
HMBS-222	ENST00000545621	SLC12A7	Q9Y666	1083 aa		18.61	■□□□□ 0.57
HMBS-222	ENST00000545621	ASTN1	O14525	1302 aa		18.6	■□□□□ 0.57
HMBS-222	ENST00000545621	ABCB11	O95342	1321 aa		18.6	■□□□□ 0.57
HMBS-222	ENST00000545621	ZBTB5	O15062	677 aa		18.6	■□□□□ 0.57
HMBS-222	ENST00000545621	PPP1R11	O60927	126 aa	Predicted RBP	18.6	■□□□□ 0.57
HMBS-222	ENST00000545621	CPA1	P15085	419 aa		18.6	■□□□□ 0.57
HMBS-222	ENST00000545621	CCND3	P30281	292 aa	Predicted RBP	18.6	■□□□□ 0.57
HMBS-222	ENST00000545621	NFXL1	Q6ZNB6	911 aa		18.6	■□□□□ 0.57
HMBS-222	ENST00000545621	RGS22	Q8NE09	1264 aa		18.6	■□□□□ 0.57
HMBS-222	ENST00000545621	TRPV1	Q8NER1	839 aa		18.6	■□□□□ 0.57
HMBS-222	ENST00000545621	LZTS2	Q9BRK4	669 aa		18.6	■□□□□ 0.57
HMBS-222	ENST00000545621	BRPF3	Q9ULD4	1205 aa		18.6	■□□□□ 0.57
HMBS-222	ENST00000545621	MYH7B	A7E2Y1	1941 aa		18.6	■□□□□ 0.57
HMBS-222	ENST00000545621	NID2	Q14112	1375 aa		18.59	■□□□□ 0.57
HMBS-222	ENST00000545621	POTEB2	H3BUK9	544 aa		18.59	■□□□□ 0.57
HMBS-222	ENST00000545621	CAST	P20810	708 aa	Known RBP	18.59	■□□□□ 0.57
HMBS-222	ENST00000545621	GNAQ	P50148	359 aa		18.59	■□□□□ 0.57
HMBS-222	ENST00000545621	EVC	P57679	992 aa		18.59	■□□□□ 0.57
HMBS-222	ENST00000545621	ANAPC15	P60006	121 aa		18.59	■□□□□ 0.57
HMBS-222	ENST00000545621	CNTN2	Q02246	1040 aa		18.59	■□□□□ 0.57
HMBS-222	ENST00000545621	GHRHR	Q02643	423 aa		18.59	■□□□□ 0.57
HMBS-222	ENST00000545621	C8orf34	Q49A92	452 aa		18.59	■□□□□ 0.57
HMBS-222	ENST00000545621	RUFY3	Q7L099	469 aa		18.59	■□□□□ 0.57
HMBS-222	ENST00000545621	UBE2Q1	Q7Z7E8	422 aa		18.59	■□□□□ 0.57
HMBS-222	ENST00000545621	FBXO11	Q86XK2	927 aa		18.59	■□□□□ 0.57
HMBS-222	ENST00000545621	FANCB	Q8NB91	859 aa		18.59	■□□□□ 0.57
HMBS-222	ENST00000545621	DEFB118	Q96PH6	123 aa		18.59	■□□□□ 0.57
HMBS-222	ENST00000545621	VAT1L	Q9HCJ6	419 aa		18.59	■□□□□ 0.57
HMBS-222	ENST00000545621	DNAH12	Q6ZR08	3092 aa		18.58	■□□□□ 0.57
HMBS-222	ENST00000545621	LOC102724159	A0A0B4J2E5	919 aa		18.58	■□□□□ 0.56
HMBS-222	ENST00000545621	SOWAHB	A6NEL2	793 aa		18.58	■□□□□ 0.56
HMBS-222	ENST00000545621	DHX16	O60231	1041 aa	Known RBP	18.58	■□□□□ 0.56
HMBS-222	ENST00000545621	SEC24B	O95487	1268 aa		18.58	■□□□□ 0.56
HMBS-222	ENST00000545621	SNAI1	O95863	264 aa	Predicted RBP	18.58	■□□□□ 0.56
HMBS-222	ENST00000545621	RXRA	P19793	462 aa		18.58	■□□□□ 0.56
HMBS-222	ENST00000545621	PWP2	Q15269	919 aa	Known RBP	18.58	■□□□□ 0.56
HMBS-222	ENST00000545621	USH1G	Q495M9	461 aa		18.58	■□□□□ 0.56
HMBS-222	ENST00000545621	LHX8	Q68G74	356 aa		18.58	■□□□□ 0.56
HMBS-222	ENST00000545621	SRBD1	Q8N5C6	995 aa	Known RBP	18.58	■□□□□ 0.56
HMBS-222	ENST00000545621	PIGS	Q96S52	555 aa		18.58	■□□□□ 0.56
HMBS-222	ENST00000545621	AMN	Q9BXJ7	453 aa		18.58	■□□□□ 0.56
HMBS-222	ENST00000545621	OGDHL	Q9ULD0	1010 aa		18.58	■□□□□ 0.56
HMBS-222	ENST00000545621	PNMA6F	A0A0J9YX94	578 aa		18.57	■□□□□ 0.56
HMBS-222	ENST00000545621	OPLAH	O14841	1288 aa		18.57	■□□□□ 0.56
HMBS-222	ENST00000545621	PLEKHA8P1	O95397	391 aa		18.57	■□□□□ 0.56
HMBS-222	ENST00000545621	BAAT	Q14032	418 aa	Predicted RBP	18.57	■□□□□ 0.56
HMBS-222	ENST00000545621	NSMF	Q6X4W1	530 aa		18.57	■□□□□ 0.56
HMBS-222	ENST00000545621		Q6ZUG5	572 aa		18.57	■□□□□ 0.56
HMBS-222	ENST00000545621	TMTC3	Q6ZXV5	915 aa		18.57	■□□□□ 0.56
HMBS-222	ENST00000545621	MICU3	Q86XE3	530 aa		18.57	■□□□□ 0.56
HMBS-222	ENST00000545621	MORC4	Q8TE76	937 aa		18.57	■□□□□ 0.56
HMBS-222	ENST00000545621	SEPT4	O43236	478 aa		18.56	■□□□□ 0.56
HMBS-222	ENST00000545621	ZBTB43	O43298	467 aa		18.56	■□□□□ 0.56
HMBS-222	ENST00000545621	MSC	O60682	206 aa		18.56	■□□□□ 0.56
HMBS-222	ENST00000545621	ZNF865	P0CJ78	1059 aa	Predicted RBP	18.56	■□□□□ 0.56
HMBS-222	ENST00000545621	RPS6	P62753	249 aa	Known RBP	18.56	■□□□□ 0.56
HMBS-222	ENST00000545621	TRAF1	Q13077	416 aa		18.56	■□□□□ 0.56
HMBS-222	ENST00000545621	PPP2R5B	Q15173	497 aa		18.56	■□□□□ 0.56
HMBS-222	ENST00000545621	SLC30A10	Q6XR72	485 aa		18.56	■□□□□ 0.56
HMBS-222	ENST00000545621	SYNE3	Q6ZMZ3	975 aa		18.56	■□□□□ 0.56
HMBS-222	ENST00000545621	RNF207	Q6ZRF8	634 aa		18.56	■□□□□ 0.56
HMBS-222	ENST00000545621	KATNBL1	Q9H079	304 aa		18.56	■□□□□ 0.56
HMBS-222	ENST00000545621	FAM217B	Q9NTX9	383 aa	Predicted RBP	18.56	■□□□□ 0.56
HMBS-222	ENST00000545621	RBM28	Q9NW13	759 aa	Known RBP	18.56	■□□□□ 0.56
HMBS-222	ENST00000545621	DDX20	Q9UHI6	824 aa	Known RBP	18.56	■□□□□ 0.56
HMBS-222	ENST00000545621	MRPL11	Q9Y3B7	192 aa	Known RBP	18.56	■□□□□ 0.56

Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms