RNA–Protein interactions for RNA: ENST00000545493.1

SCARB1-210, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-210ENST00000545493 PRKAG2Q9UGJ0 569 aa24.85■■□□□ 1.57
SCARB1-210ENST00000545493 CST5P28325 142 aaPredicted RBP24.84■■□□□ 1.57
SCARB1-210ENST00000545493 SH3RF1Q7Z6J0 888 aa24.84■■□□□ 1.57
SCARB1-210ENST00000545493 TSEN34Q9BSV6 310 aaKnown RBP24.84■■□□□ 1.57
SCARB1-210ENST00000545493 UPF3AQ9H1J1 476 aaKnown RBP24.84■■□□□ 1.57
SCARB1-210ENST00000545493 C11orf97A0A1B0GVM6 126 aaPredicted RBP24.83■■□□□ 1.57
SCARB1-210ENST00000545493 MOXD2PA6NHM9 499 aa24.83■■□□□ 1.57
SCARB1-210ENST00000545493 B4E1Z4 1266 aa24.83■■□□□ 1.57
SCARB1-210ENST00000545493 NFIBO00712 420 aa24.83■■□□□ 1.57
SCARB1-210ENST00000545493 KDM4AO75164 1064 aa24.83■■□□□ 1.57
SCARB1-210ENST00000545493 ACLYP53396 1101 aa24.83■■□□□ 1.57
SCARB1-210ENST00000545493 TLE2Q04725 743 aa24.83■■□□□ 1.57
SCARB1-210ENST00000545493 NSMFQ6X4W1 530 aa24.83■■□□□ 1.57
SCARB1-210ENST00000545493 PURBQ96QR8 312 aaKnown RBP24.83■■□□□ 1.57
SCARB1-210ENST00000545493 LBHD1Q9BQE6 289 aaPredicted RBP24.83■■□□□ 1.57
SCARB1-210ENST00000545493 TRIM43BA6NCK2 446 aa24.82■■□□□ 1.56
SCARB1-210ENST00000545493 ASB14A6NK59 587 aa24.82■■□□□ 1.56
SCARB1-210ENST00000545493 NT5C2P49902 561 aa24.82■■□□□ 1.56
SCARB1-210ENST00000545493 GJA9P57773 515 aa24.82■■□□□ 1.56
SCARB1-210ENST00000545493 TRIM43Q96BQ3 446 aaPredicted RBP24.82■■□□□ 1.56
SCARB1-210ENST00000545493 CDH23Q9H251 3354 aa24.82■■□□□ 1.56
SCARB1-210ENST00000545493 STARD7Q9NQZ5 370 aa24.82■■□□□ 1.56
SCARB1-210ENST00000545493 RAD50Q92878 1312 aa24.82■■□□□ 1.56
SCARB1-210ENST00000545493 CTAGE5O15320 804 aa24.81■■□□□ 1.56
SCARB1-210ENST00000545493 C6orf222P0C671 652 aaPredicted RBP24.81■■□□□ 1.56
SCARB1-210ENST00000545493 KCNA10Q16322 511 aa24.81■■□□□ 1.56
SCARB1-210ENST00000545493 IMMTQ16891 758 aaKnown RBP24.81■■□□□ 1.56
SCARB1-210ENST00000545493 DGKHQ86XP1 1220 aa24.81■■□□□ 1.56
SCARB1-210ENST00000545493 FBXO16Q8IX29 292 aaPredicted RBP24.81■■□□□ 1.56
SCARB1-210ENST00000545493 PQBP1O60828 265 aaKnown RBP24.8■■□□□ 1.56
SCARB1-210ENST00000545493 CLTBP09497 229 aa24.8■■□□□ 1.56
SCARB1-210ENST00000545493 GOLGA8HP0CJ92 632 aa24.8■■□□□ 1.56
SCARB1-210ENST00000545493 PTGS1P23219 599 aa24.8■■□□□ 1.56
SCARB1-210ENST00000545493 SLC30A10Q6XR72 485 aa24.8■■□□□ 1.56
SCARB1-210ENST00000545493 ENAHQ8N8S7 591 aaPredicted RBP24.8■■□□□ 1.56
SCARB1-210ENST00000545493 PNMA1Q8ND90 353 aa24.8■■□□□ 1.56
SCARB1-210ENST00000545493 CPVLQ9H3G5 476 aa24.8■■□□□ 1.56
SCARB1-210ENST00000545493 TNKSO95271 1327 aa24.8■■□□□ 1.56
SCARB1-210ENST00000545493 WDR19Q8NEZ3 1342 aa24.8■■□□□ 1.56
SCARB1-210ENST00000545493 ITGB8P26012 769 aa24.79■■□□□ 1.56
SCARB1-210ENST00000545493 BAATQ14032 418 aaPredicted RBP24.79■■□□□ 1.56
SCARB1-210ENST00000545493 IQCA1Q86XH1 822 aa24.79■■□□□ 1.56
SCARB1-210ENST00000545493 MORC4Q8TE76 937 aa24.79■■□□□ 1.56
SCARB1-210ENST00000545493 CLEC4DQ8WXI8 215 aa24.79■■□□□ 1.56
SCARB1-210ENST00000545493 BADQ92934 168 aa24.79■■□□□ 1.56
SCARB1-210ENST00000545493 ZSCAN10Q96SZ4 725 aaPredicted RBP24.79■■□□□ 1.56
SCARB1-210ENST00000545493 GNEQ9Y223 722 aaKnown RBP24.79■■□□□ 1.56
SCARB1-210ENST00000545493 ASGR1P07306 291 aa24.78■■□□□ 1.56
SCARB1-210ENST00000545493 NKX3-2P78367 333 aa24.78■■□□□ 1.56
SCARB1-210ENST00000545493 GPATCH4Q5T3I0 446 aaKnown RBP24.78■■□□□ 1.56
SCARB1-210ENST00000545493 GPR153Q6NV75 609 aa24.78■■□□□ 1.56
SCARB1-210ENST00000545493 NUP133Q8WUM0 1156 aa24.78■■□□□ 1.56
SCARB1-210ENST00000545493 ANKS1AQ92625 1134 aa24.78■■□□□ 1.56
SCARB1-210ENST00000545493 ALDH5A1P51649 535 aaPredicted RBP24.77■■□□□ 1.56
SCARB1-210ENST00000545493 TNFAIP2Q03169 654 aa24.77■■□□□ 1.56
SCARB1-210ENST00000545493 TAPT1Q6NXT6 567 aa24.77■■□□□ 1.56
SCARB1-210ENST00000545493 ANKRD33Q7Z3H0 272 aa24.77■■□□□ 1.56
SCARB1-210ENST00000545493 TLK2Q86UE8 772 aa24.77■■□□□ 1.56
SCARB1-210ENST00000545493 PCSK9Q8NBP7 692 aaKnown RBP24.77■■□□□ 1.56
SCARB1-210ENST00000545493 SPC25Q9HBM1 224 aa24.77■■□□□ 1.56
SCARB1-210ENST00000545493 PDGFCQ9NRA1 345 aa24.77■■□□□ 1.56
SCARB1-210ENST00000545493 CTNNA3Q9UI47 895 aa24.77■■□□□ 1.56
SCARB1-210ENST00000545493 SMPD1P17405 629 aa24.76■■□□□ 1.55
SCARB1-210ENST00000545493 BEX3Q00994 111 aa24.76■■□□□ 1.55
SCARB1-210ENST00000545493 CCDC178Q5BJE1 867 aa24.76■■□□□ 1.55
SCARB1-210ENST00000545493 C9orf50Q5SZB4 431 aa24.76■■□□□ 1.55
SCARB1-210ENST00000545493 TMEM63BQ5T3F8 832 aa24.76■■□□□ 1.55
SCARB1-210ENST00000545493 EEPD1Q7L9B9 569 aa24.76■■□□□ 1.55
SCARB1-210ENST00000545493 GLT1D1Q96MS3 346 aa24.76■■□□□ 1.55
SCARB1-210ENST00000545493 KAT14Q9H8E8 782 aa24.76■■□□□ 1.55
SCARB1-210ENST00000545493 ZSWIM5Q9P217 1185 aa24.76■■□□□ 1.55
SCARB1-210ENST00000545493 PTPDC1A2A3K4 754 aa24.75■■□□□ 1.55
SCARB1-210ENST00000545493 KIAA0355O15063 1070 aa24.75■■□□□ 1.55
SCARB1-210ENST00000545493 FAAP100Q0VG06 881 aa24.75■■□□□ 1.55
SCARB1-210ENST00000545493 Q7L0L9 218 aa24.75■■□□□ 1.55
SCARB1-210ENST00000545493 TOX2Q96NM4 488 aa24.75■■□□□ 1.55
SCARB1-210ENST00000545493 KRT23Q9C075 422 aa24.75■■□□□ 1.55
SCARB1-210ENST00000545493 UBA5Q9GZZ9 404 aa24.75■■□□□ 1.55
SCARB1-210ENST00000545493 CNNM2Q9H8M5 875 aa24.75■■□□□ 1.55
SCARB1-210ENST00000545493 VTA1Q9NP79 307 aa24.75■■□□□ 1.55
SCARB1-210ENST00000545493 ELP1O95163 1332 aa24.75■■□□□ 1.55
SCARB1-210ENST00000545493 CHMLP26374 656 aa24.74■■□□□ 1.55
SCARB1-210ENST00000545493 CDC37Q16543 378 aaPredicted RBP24.74■■□□□ 1.55
SCARB1-210ENST00000545493 GNASQ5JWF2 1037 aa24.74■■□□□ 1.55
SCARB1-210ENST00000545493 PNMA2Q9UL42 364 aa24.74■■□□□ 1.55
SCARB1-210ENST00000545493 MYH6P13533 1939 aa24.74■■□□□ 1.55
SCARB1-210ENST00000545493 CALML3P27482 149 aa24.73■■□□□ 1.55
SCARB1-210ENST00000545493 RPS6P62753 249 aaKnown RBP24.73■■□□□ 1.55
SCARB1-210ENST00000545493 PTH1RQ03431 593 aa24.73■■□□□ 1.55
SCARB1-210ENST00000545493 USH1GQ495M9 461 aa24.73■■□□□ 1.55
SCARB1-210ENST00000545493 ASPRV1Q53RT3 343 aa24.73■■□□□ 1.55
SCARB1-210ENST00000545493 RNF207Q6ZRF8 634 aa24.73■■□□□ 1.55
SCARB1-210ENST00000545493 CYB5R4Q7L1T6 521 aa24.73■■□□□ 1.55
SCARB1-210ENST00000545493 ADD3Q9UEY8 706 aaKnown RBP24.73■■□□□ 1.55
SCARB1-210ENST00000545493 TBX21Q9UL17 535 aa24.73■■□□□ 1.55
SCARB1-210ENST00000545493 LOC102724159A0A0B4J2E5 919 aa24.72■■□□□ 1.55
SCARB1-210ENST00000545493 A0A0U1RQG5 324 aaPredicted RBP24.72■■□□□ 1.55
SCARB1-210ENST00000545493 CDK7P50613 346 aa24.72■■□□□ 1.55
SCARB1-210ENST00000545493 PWP2Q15269 919 aaKnown RBP24.72■■□□□ 1.55
SCARB1-210ENST00000545493 SEC23AQ15436 765 aa24.72■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms