RNA–Protein interactions for RNA: ENST00000545440.5

SNHG1-223, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 754 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-223ENST00000545440 ARPP21Q9UBL0 812 aaPredicted RBP9.21□□□□□ -0.94
SNHG1-223ENST00000545440 TNPO2O14787 897 aaKnown RBP9.2□□□□□ -0.94
SNHG1-223ENST00000545440 PRKAB2O43741 272 aa9.2□□□□□ -0.94
SNHG1-223ENST00000545440 CHGBP05060 677 aa9.2□□□□□ -0.94
SNHG1-223ENST00000545440 USP14P54578 494 aa9.2□□□□□ -0.94
SNHG1-223ENST00000545440 PRKCZQ05513 592 aa9.2□□□□□ -0.94
SNHG1-223ENST00000545440 RAB3GAP1Q15042 981 aa9.2□□□□□ -0.94
SNHG1-223ENST00000545440 C12orf60Q5U649 245 aa9.2□□□□□ -0.94
SNHG1-223ENST00000545440 GIMAP6Q6P9H5 292 aa9.2□□□□□ -0.94
SNHG1-223ENST00000545440 CYP4X1Q8N118 509 aa9.2□□□□□ -0.94
SNHG1-223ENST00000545440 RAET1EQ8TD07 263 aa9.2□□□□□ -0.94
SNHG1-223ENST00000545440 GTF3C2Q8WUA4 911 aaPredicted RBP9.2□□□□□ -0.94
SNHG1-223ENST00000545440 PUS7LQ9H0K6 701 aaKnown RBP9.2□□□□□ -0.94
SNHG1-223ENST00000545440 MORF4L1Q9UBU8 362 aa9.2□□□□□ -0.94
SNHG1-223ENST00000545440 SLC4A4Q9Y6R1 1079 aa9.2□□□□□ -0.94
SNHG1-223ENST00000545440 MKI67P46013 3256 aaKnown RBP9.19□□□□□ -0.94
SNHG1-223ENST00000545440 ERVH48-1M5A8F1 160 aa9.19□□□□□ -0.94
SNHG1-223ENST00000545440 RNF113AO15541 343 aaKnown RBP9.19□□□□□ -0.94
SNHG1-223ENST00000545440 CYP2D6P10635 497 aa9.19□□□□□ -0.94
SNHG1-223ENST00000545440 GNAT2P19087 354 aa9.19□□□□□ -0.94
SNHG1-223ENST00000545440 GUCY1A2P33402 732 aa9.19□□□□□ -0.94
SNHG1-223ENST00000545440 HERVK_113P62684 666 aa9.19□□□□□ -0.94
SNHG1-223ENST00000545440 TMEM179Q6ZVK1 233 aa9.19□□□□□ -0.94
SNHG1-223ENST00000545440 C16orf86Q6ZW13 317 aa9.19□□□□□ -0.94
SNHG1-223ENST00000545440 SLC44A5Q8NCS7 719 aa9.19□□□□□ -0.94
SNHG1-223ENST00000545440 SNIP1Q8TAD8 396 aaKnown RBP9.19□□□□□ -0.94
SNHG1-223ENST00000545440 OTUD7AQ8TE49 926 aaPredicted RBP9.19□□□□□ -0.94
SNHG1-223ENST00000545440 SH3TC2Q8TF17 1288 aa9.19□□□□□ -0.94
SNHG1-223ENST00000545440 STRBPQ96SI9 672 aaKnown RBP9.19□□□□□ -0.94
SNHG1-223ENST00000545440 MYH6P13533 1939 aa9.19□□□□□ -0.94
SNHG1-223ENST00000545440 MPHOSPH10O00566 681 aaKnown RBP9.18□□□□□ -0.94
SNHG1-223ENST00000545440 GPAA1O43292 621 aa9.18□□□□□ -0.94
SNHG1-223ENST00000545440 VCAM1P19320 739 aa9.18□□□□□ -0.94
SNHG1-223ENST00000545440 GRK4P32298 578 aa9.18□□□□□ -0.94
SNHG1-223ENST00000545440 FLT3LGP49771 235 aa9.18□□□□□ -0.94
SNHG1-223ENST00000545440 SEPT2Q15019 361 aa9.18□□□□□ -0.94
SNHG1-223ENST00000545440 ANKMY2Q8IV38 441 aa9.18□□□□□ -0.94
SNHG1-223ENST00000545440 SMC5Q8IY18 1101 aa9.18□□□□□ -0.94
SNHG1-223ENST00000545440 OSBP2Q969R2 916 aa9.18□□□□□ -0.94
SNHG1-223ENST00000545440 COA7Q96BR5 231 aa9.18□□□□□ -0.94
SNHG1-223ENST00000545440 DYNLL2Q96FJ2 89 aa9.18□□□□□ -0.94
SNHG1-223ENST00000545440 CCDC17Q96LX7 622 aa9.18□□□□□ -0.94
SNHG1-223ENST00000545440 FSD1Q9BTV5 496 aa9.18□□□□□ -0.94
SNHG1-223ENST00000545440 MCM3APO60318 1980 aa9.17□□□□□ -0.94
SNHG1-223ENST00000545440 CYP2D7A0A087X1C5 515 aa9.17□□□□□ -0.94
SNHG1-223ENST00000545440 GSG1L2A8MUP6 293 aa9.17□□□□□ -0.94
SNHG1-223ENST00000545440 M0R2C6 588 aa9.17□□□□□ -0.94
SNHG1-223ENST00000545440 CDK8P49336 464 aa9.17□□□□□ -0.94
SNHG1-223ENST00000545440 PDE1AP54750 535 aa9.17□□□□□ -0.94
SNHG1-223ENST00000545440 ERVK-9P63128 1117 aa9.17□□□□□ -0.94
SNHG1-223ENST00000545440 ERVK-24P63145 666 aa9.17□□□□□ -0.94
SNHG1-223ENST00000545440 ICA1Q05084 483 aa9.17□□□□□ -0.94
SNHG1-223ENST00000545440 PTK7Q13308 1070 aa9.17□□□□□ -0.94
SNHG1-223ENST00000545440 ZYXQ15942 572 aaKnown RBP9.17□□□□□ -0.94
SNHG1-223ENST00000545440 SBK1Q52WX2 424 aa9.17□□□□□ -0.94
SNHG1-223ENST00000545440 ANKRD45Q5TZF3 282 aa9.17□□□□□ -0.94
SNHG1-223ENST00000545440 CTR9Q6PD62 1173 aa9.17□□□□□ -0.94
SNHG1-223ENST00000545440 LBX2Q6XYB7 198 aa9.17□□□□□ -0.94
SNHG1-223ENST00000545440 CYP2U1Q7Z449 544 aa9.17□□□□□ -0.94
SNHG1-223ENST00000545440 TICAM2Q86XR7 235 aa9.17□□□□□ -0.94
SNHG1-223ENST00000545440 ACER1Q8TDN7 264 aa9.17□□□□□ -0.94
SNHG1-223ENST00000545440 LPAR1Q92633 364 aa9.17□□□□□ -0.94
SNHG1-223ENST00000545440 P2RX7Q99572 595 aaKnown RBP9.17□□□□□ -0.94
SNHG1-223ENST00000545440 SH2D4AQ9H788 454 aa9.17□□□□□ -0.94
SNHG1-223ENST00000545440 ARHGEF10LQ9HCE6 1279 aa9.17□□□□□ -0.94
SNHG1-223ENST00000545440 TXNRD2Q9NNW7 524 aa9.17□□□□□ -0.94
SNHG1-223ENST00000545440 STAP2Q9UGK3 403 aa9.17□□□□□ -0.94
SNHG1-223ENST00000545440 GABRQQ9UN88 632 aa9.17□□□□□ -0.94
SNHG1-223ENST00000545440 PLIN4Q96Q06 1357 aa9.16□□□□□ -0.94
SNHG1-223ENST00000545440 SIAH2O43255 324 aa9.16□□□□□ -0.94
SNHG1-223ENST00000545440 ADCY3O60266 1144 aa9.16□□□□□ -0.94
SNHG1-223ENST00000545440 BRD1O95696 1058 aa9.16□□□□□ -0.94
SNHG1-223ENST00000545440 AKR1B1P15121 316 aa9.16□□□□□ -0.94
SNHG1-223ENST00000545440 TDO2P48775 406 aa9.16□□□□□ -0.94
SNHG1-223ENST00000545440 SEC13P55735 322 aa9.16□□□□□ -0.94
SNHG1-223ENST00000545440 UBXN2AP68543 259 aa9.16□□□□□ -0.94
SNHG1-223ENST00000545440 TSGA10IPQ3SY00 556 aa9.16□□□□□ -0.94
SNHG1-223ENST00000545440 ZMYM1Q5SVZ6 1142 aa9.16□□□□□ -0.94
SNHG1-223ENST00000545440 CATSPERGQ6ZRH7 1159 aa9.16□□□□□ -0.94
SNHG1-223ENST00000545440 GPRC5AQ8NFJ5 357 aa9.16□□□□□ -0.94
SNHG1-223ENST00000545440 SOCS4Q8WXH5 440 aa9.16□□□□□ -0.94
SNHG1-223ENST00000545440 EVI5LQ96CN4 794 aa9.16□□□□□ -0.94
SNHG1-223ENST00000545440 RWDD1Q9H446 243 aaPredicted RBP9.16□□□□□ -0.94
SNHG1-223ENST00000545440 EPB41L4AQ9HCS5 686 aaPredicted RBP9.16□□□□□ -0.94
SNHG1-223ENST00000545440 CEP290O15078 2479 aa9.15□□□□□ -0.94
SNHG1-223ENST00000545440 A0A1W2PRG0 241 aa9.15□□□□□ -0.94
SNHG1-223ENST00000545440 SMIM22K7EJ46 135 aa9.15□□□□□ -0.94
SNHG1-223ENST00000545440 MAPK4P31152 587 aa9.15□□□□□ -0.94
SNHG1-223ENST00000545440 GRM5P41594 1212 aa9.15□□□□□ -0.94
SNHG1-223ENST00000545440 CCNA1P78396 465 aa9.15□□□□□ -0.94
SNHG1-223ENST00000545440 DPYDQ12882 1025 aa9.15□□□□□ -0.94
SNHG1-223ENST00000545440 CRTC2Q53ET0 693 aaPredicted RBP9.15□□□□□ -0.94
SNHG1-223ENST00000545440 PPP1R26Q5T8A7 1209 aaPredicted RBP9.15□□□□□ -0.94
SNHG1-223ENST00000545440 CLEC10AQ8IUN9 316 aa9.15□□□□□ -0.94
SNHG1-223ENST00000545440 TPCN2Q8NHX9 752 aa9.15□□□□□ -0.94
SNHG1-223ENST00000545440 EXOC6Q8TAG9 804 aa9.15□□□□□ -0.94
SNHG1-223ENST00000545440 PAGR1Q9BTK6 254 aa9.15□□□□□ -0.94
SNHG1-223ENST00000545440 NACAP1Q9BZK3 213 aa9.15□□□□□ -0.94
SNHG1-223ENST00000545440 RPAP3Q9H6T3 665 aaPredicted RBP9.15□□□□□ -0.94
SNHG1-223ENST00000545440 KANSL2Q9H9L4 492 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms