RNA–Protein interactions for RNA: ENST00000545111.6

SV2B-203, Transcript of synaptic vesicle glycoprotein 2B, humanhuman

TSL 2 BASIC

Gene SV2B, Length 2,099 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SV2B-203ENST00000545111 FAM13BQ9NYF5 915 aa28.78■■■□□ 2.2
SV2B-203ENST00000545111 XRCC6P12956 609 aaKnown RBP eCLIP28.77■■■□□ 2.2
SV2B-203ENST00000545111 DGKZQ13574 1117 aa28.77■■■□□ 2.2
SV2B-203ENST00000545111 ARL6IP4Q66PJ3 421 aaKnown RBP28.77■■■□□ 2.2
SV2B-203ENST00000545111 DDX55Q8NHQ9 600 aaKnown RBP eCLIP28.77■■■□□ 2.2
SV2B-203ENST00000545111 ZC3H15Q8WU90 426 aaKnown RBP28.77■■■□□ 2.2
SV2B-203ENST00000545111 KCNH3Q9ULD8 1083 aa28.77■■■□□ 2.2
SV2B-203ENST00000545111 USP14P54578 494 aa28.76■■■□□ 2.19
SV2B-203ENST00000545111 NOL9Q5SY16 702 aaKnown RBP28.76■■■□□ 2.19
SV2B-203ENST00000545111 ZNF280CQ8ND82 737 aa28.76■■■□□ 2.19
SV2B-203ENST00000545111 SDF4Q9BRK5 362 aa28.76■■■□□ 2.19
SV2B-203ENST00000545111 EMILIN3Q9NT22 766 aa28.76■■■□□ 2.19
SV2B-203ENST00000545111 BACE1P56817 501 aa28.76■■■□□ 2.19
SV2B-203ENST00000545111 TIGD1Q96MW7 591 aa28.76■■■□□ 2.19
SV2B-203ENST00000545111 ZHX2Q9Y6X8 837 aa28.76■■■□□ 2.19
SV2B-203ENST00000545111 VWA3AA6NCI4 1184 aa28.75■■■□□ 2.19
SV2B-203ENST00000545111 USP17L15C9J2P7 530 aa28.75■■■□□ 2.19
SV2B-203ENST00000545111 USP17L13C9JLJ4 530 aa28.75■■■□□ 2.19
SV2B-203ENST00000545111 USP17L11C9JVI0 530 aa28.75■■■□□ 2.19
SV2B-203ENST00000545111 USP17L18D6R9N7 530 aa28.75■■■□□ 2.19
SV2B-203ENST00000545111 USP17L22D6RA61 530 aa28.75■■■□□ 2.19
SV2B-203ENST00000545111 USP17L17D6RBQ6 530 aa28.75■■■□□ 2.19
SV2B-203ENST00000545111 USP17L19D6RCP7 530 aa28.75■■■□□ 2.19
SV2B-203ENST00000545111 USP17L20D6RJB6 530 aa28.75■■■□□ 2.19
SV2B-203ENST00000545111 CCNT1O60563 726 aaKnown RBP28.75■■■□□ 2.19
SV2B-203ENST00000545111 USP17L24Q0WX57 530 aa28.75■■■□□ 2.19
SV2B-203ENST00000545111 USP17L6PQ6QN14 398 aa28.75■■■□□ 2.19
SV2B-203ENST00000545111 CCDC192P0DO97 292 aa28.74■■■□□ 2.19
SV2B-203ENST00000545111 TRAF1Q13077 416 aa28.74■■■□□ 2.19
SV2B-203ENST00000545111 IL17AQ16552 155 aa28.74■■■□□ 2.19
SV2B-203ENST00000545111 USP49Q70CQ1 688 aa28.74■■■□□ 2.19
SV2B-203ENST00000545111 TMEM60Q9H2L4 133 aa28.74■■■□□ 2.19
SV2B-203ENST00000545111 MEIS2O14770 477 aa28.73■■■□□ 2.19
SV2B-203ENST00000545111 TAL1P17542 331 aaPredicted RBP28.73■■■□□ 2.19
SV2B-203ENST00000545111 VCAM1P19320 739 aa28.73■■■□□ 2.19
SV2B-203ENST00000545111 CCDC174Q6PII3 467 aa28.73■■■□□ 2.19
SV2B-203ENST00000545111 SAMD1Q6SPF0 538 aaPredicted RBP28.73■■■□□ 2.19
SV2B-203ENST00000545111 LAD1O00515 517 aa28.73■■■□□ 2.19
SV2B-203ENST00000545111 ORC2Q13416 577 aaPredicted RBP28.73■■■□□ 2.19
SV2B-203ENST00000545111 PRPF38AQ8NAV1 312 aaKnown RBP28.73■■■□□ 2.19
SV2B-203ENST00000545111 TAF1DQ9H5J8 278 aaPredicted RBP28.73■■■□□ 2.19
SV2B-203ENST00000545111 IQCA1LA6NCM1 817 aa28.72■■■□□ 2.19
SV2B-203ENST00000545111 EDIL3O43854 480 aa28.72■■■□□ 2.19
SV2B-203ENST00000545111 PPP1R12BO60237 982 aaPredicted RBP28.72■■■□□ 2.19
SV2B-203ENST00000545111 EPSTI1Q96J88 318 aa28.72■■■□□ 2.19
SV2B-203ENST00000545111 SLF1Q9BQI6 1058 aa28.72■■■□□ 2.19
SV2B-203ENST00000545111 OPLAHO14841 1288 aa28.71■■■□□ 2.19
SV2B-203ENST00000545111 TYRO3Q06418 890 aa28.71■■■□□ 2.19
SV2B-203ENST00000545111 PPP1R3FQ6ZSY5 799 aaPredicted RBP28.71■■■□□ 2.19
SV2B-203ENST00000545111 POTECB2RU33 542 aa28.71■■■□□ 2.19
SV2B-203ENST00000545111 MAP3K9P80192 1104 aa28.71■■■□□ 2.19
SV2B-203ENST00000545111 LONRF3Q496Y0 759 aa28.71■■■□□ 2.19
SV2B-203ENST00000545111 SASS6Q6UVJ0 657 aa28.71■■■□□ 2.19
SV2B-203ENST00000545111 SYMPKQ92797 1274 aaKnown RBP28.71■■■□□ 2.19
SV2B-203ENST00000545111 SCN4AP35499 1836 aa28.71■■■□□ 2.19
SV2B-203ENST00000545111 NEMFO60524 1076 aa28.7■■■□□ 2.19
SV2B-203ENST00000545111 AP3B2Q13367 1082 aa28.7■■■□□ 2.19
SV2B-203ENST00000545111 RNF214Q8ND24 703 aa28.7■■■□□ 2.19
SV2B-203ENST00000545111 TANGO6Q9C0B7 1094 aa28.7■■■□□ 2.19
SV2B-203ENST00000545111 PHIPQ8WWQ0 1821 aa28.7■■■□□ 2.18
SV2B-203ENST00000545111 C19orf81C9J6K1 198 aa28.7■■■□□ 2.18
SV2B-203ENST00000545111 POLR2DO15514 142 aaKnown RBP28.7■■■□□ 2.18
SV2B-203ENST00000545111 PRPHP41219 470 aa28.7■■■□□ 2.18
SV2B-203ENST00000545111 EAPPQ56P03 285 aaPredicted RBP28.7■■■□□ 2.18
SV2B-203ENST00000545111 DTHD1Q6ZMT9 781 aa28.7■■■□□ 2.18
SV2B-203ENST00000545111 RPAP3Q9H6T3 665 aaPredicted RBP28.7■■■□□ 2.18
SV2B-203ENST00000545111 SMCHD1A6NHR9 2005 aa28.7■■■□□ 2.18
SV2B-203ENST00000545111 LONP1P36776 959 aaKnown RBP28.69■■■□□ 2.18
SV2B-203ENST00000545111 VGLL4Q14135 290 aa28.69■■■□□ 2.18
SV2B-203ENST00000545111 MCTP2Q6DN12 878 aa28.69■■■□□ 2.18
SV2B-203ENST00000545111 KRBA2Q6ZNG9 492 aa28.69■■■□□ 2.18
SV2B-203ENST00000545111 C12orf42Q96LP6 360 aa28.69■■■□□ 2.18
SV2B-203ENST00000545111 PANK2Q9BZ23 570 aa28.69■■■□□ 2.18
SV2B-203ENST00000545111 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP28.68■■■□□ 2.18
SV2B-203ENST00000545111 CNNM3Q8NE01 707 aa28.68■■■□□ 2.18
SV2B-203ENST00000545111 ERCC4Q92889 916 aaPredicted RBP28.68■■■□□ 2.18
SV2B-203ENST00000545111 CDCA5Q96FF9 252 aa28.68■■■□□ 2.18
SV2B-203ENST00000545111 ANO3Q9BYT9 981 aa28.68■■■□□ 2.18
SV2B-203ENST00000545111 AFG3L2Q9Y4W6 797 aa28.68■■■□□ 2.18
SV2B-203ENST00000545111 SNCAIPQ9Y6H5 919 aa28.68■■■□□ 2.18
SV2B-203ENST00000545111 FLOT1O75955 427 aa28.68■■■□□ 2.18
SV2B-203ENST00000545111 OR52Z1P0C646 297 aa28.68■■■□□ 2.18
SV2B-203ENST00000545111 HMGCS2P54868 508 aa28.68■■■□□ 2.18
SV2B-203ENST00000545111 LDHDQ86WU2 507 aa28.68■■■□□ 2.18
SV2B-203ENST00000545111 PDILTQ8N807 584 aa28.68■■■□□ 2.18
SV2B-203ENST00000545111 TDP2O95551 362 aa28.67■■■□□ 2.18
SV2B-203ENST00000545111 PPP4R3AQ6IN85 833 aa28.67■■■□□ 2.18
SV2B-203ENST00000545111 P2RX7Q99572 595 aaKnown RBP28.67■■■□□ 2.18
SV2B-203ENST00000545111 KIAA1468Q9P260 1216 aa28.67■■■□□ 2.18
SV2B-203ENST00000545111 PIK3CDO00329 1044 aa28.66■■■□□ 2.18
SV2B-203ENST00000545111 PNMA8AQ86V59 439 aaPredicted RBP28.66■■■□□ 2.18
SV2B-203ENST00000545111 POTEDQ86YR6 584 aa28.66■■■□□ 2.18
SV2B-203ENST00000545111 PPP1R9AQ9ULJ8 1098 aa28.66■■■□□ 2.18
SV2B-203ENST00000545111 MRPL11Q9Y3B7 192 aaKnown RBP28.66■■■□□ 2.18
SV2B-203ENST00000545111 ZNF536O15090 1300 aa28.66■■■□□ 2.18
SV2B-203ENST00000545111 FOSP01100 380 aaPredicted RBP28.66■■■□□ 2.18
SV2B-203ENST00000545111 ICAM1P05362 532 aa28.66■■■□□ 2.18
SV2B-203ENST00000545111 NF2P35240 595 aa28.66■■■□□ 2.18
SV2B-203ENST00000545111 IREB2P48200 963 aaKnown RBP28.66■■■□□ 2.18
SV2B-203ENST00000545111 TEX2Q8IWB9 1127 aa28.66■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms