RNA–Protein interactions for RNA: ENST00000544990.5

CPSF7-224, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-224ENST00000544990 ZNF333Q96JL9 665 aa8.71□□□□□ -1.02
CPSF7-224ENST00000544990 NUDT12Q9BQG2 462 aa8.71□□□□□ -1.02
CPSF7-224ENST00000544990 DSCC1Q9BVC3 393 aa8.71□□□□□ -1.02
CPSF7-224ENST00000544990 RNF41Q9H4P4 317 aaPredicted RBP8.71□□□□□ -1.02
CPSF7-224ENST00000544990 IL21Q9HBE4 155 aa8.71□□□□□ -1.02
CPSF7-224ENST00000544990 CTNNA3Q9UI47 895 aa8.71□□□□□ -1.02
CPSF7-224ENST00000544990 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.71□□□□□ -1.02
CPSF7-224ENST00000544990 PLIN4Q96Q06 1357 aa8.71□□□□□ -1.02
CPSF7-224ENST00000544990 FGRP09769 529 aa8.7□□□□□ -1.02
CPSF7-224ENST00000544990 SOX11P35716 441 aa8.7□□□□□ -1.02
CPSF7-224ENST00000544990 NT5C2P49902 561 aa8.7□□□□□ -1.02
CPSF7-224ENST00000544990 HAND2P61296 217 aa8.7□□□□□ -1.02
CPSF7-224ENST00000544990 VAC14Q08AM6 782 aa8.7□□□□□ -1.02
CPSF7-224ENST00000544990 RRP12Q5JTH9 1297 aaKnown RBP8.7□□□□□ -1.02
CPSF7-224ENST00000544990 KIAA1755Q5JYT7 1200 aa8.7□□□□□ -1.02
CPSF7-224ENST00000544990 FAM83BQ5T0W9 1011 aa8.7□□□□□ -1.02
CPSF7-224ENST00000544990 AKNAD1Q5T1N1 836 aa8.7□□□□□ -1.02
CPSF7-224ENST00000544990 WDR78Q5VTH9 848 aa8.7□□□□□ -1.02
CPSF7-224ENST00000544990 GPR142Q7Z601 462 aa8.7□□□□□ -1.02
CPSF7-224ENST00000544990 PLEKHH3Q7Z736 793 aa8.7□□□□□ -1.02
CPSF7-224ENST00000544990 SOCS4Q8WXH5 440 aa8.7□□□□□ -1.02
CPSF7-224ENST00000544990 CCDC136Q96JN2 1154 aa8.7□□□□□ -1.02
CPSF7-224ENST00000544990 BTBD7Q9P203 1132 aa8.7□□□□□ -1.02
CPSF7-224ENST00000544990 GJD2Q9UKL4 321 aa8.7□□□□□ -1.02
CPSF7-224ENST00000544990 STX8Q9UNK0 236 aa8.7□□□□□ -1.02
CPSF7-224ENST00000544990 IVNS1ABPQ9Y6Y0 642 aa8.7□□□□□ -1.02
CPSF7-224ENST00000544990 RAD50Q92878 1312 aa8.7□□□□□ -1.02
CPSF7-224ENST00000544990 PARP14Q460N5 1801 aa8.7□□□□□ -1.02
CPSF7-224ENST00000544990 RLFQ13129 1914 aa8.7□□□□□ -1.02
CPSF7-224ENST00000544990 RBBP6Q7Z6E9 1792 aaKnown RBP8.69□□□□□ -1.02
CPSF7-224ENST00000544990 POM121CA8CG34 1229 aa8.69□□□□□ -1.02
CPSF7-224ENST00000544990 STRNO43815 780 aa8.69□□□□□ -1.02
CPSF7-224ENST00000544990 PEX10O60683 326 aa8.69□□□□□ -1.02
CPSF7-224ENST00000544990 CNMDO75829 334 aa8.69□□□□□ -1.02
CPSF7-224ENST00000544990 NDUFB10O96000 172 aa8.69□□□□□ -1.02
CPSF7-224ENST00000544990 ADH1BP00325 375 aa8.69□□□□□ -1.02
CPSF7-224ENST00000544990 MYCP01106 439 aaPredicted RBP8.69□□□□□ -1.02
CPSF7-224ENST00000544990 CENPBP07199 599 aaPredicted RBP8.69□□□□□ -1.02
CPSF7-224ENST00000544990 CCNYL3P0C7X3 344 aa8.69□□□□□ -1.02
CPSF7-224ENST00000544990 XRCC5P13010 732 aaKnown RBP8.69□□□□□ -1.02
CPSF7-224ENST00000544990 CYP2B6P20813 491 aa8.69□□□□□ -1.02
CPSF7-224ENST00000544990 CHMLP26374 656 aa8.69□□□□□ -1.02
CPSF7-224ENST00000544990 RGS2P41220 211 aa8.69□□□□□ -1.02
CPSF7-224ENST00000544990 SEMA3FQ13275 785 aa8.69□□□□□ -1.02
CPSF7-224ENST00000544990 PLS1Q14651 629 aa8.69□□□□□ -1.02
CPSF7-224ENST00000544990 IMMTQ16891 758 aaKnown RBP8.69□□□□□ -1.02
CPSF7-224ENST00000544990 SLFN13Q68D06 897 aa8.69□□□□□ -1.02
CPSF7-224ENST00000544990 TRMT44Q8IYL2 757 aaKnown RBP8.69□□□□□ -1.02
CPSF7-224ENST00000544990 PRPF38AQ8NAV1 312 aaKnown RBP8.69□□□□□ -1.02
CPSF7-224ENST00000544990 GMCL1P1Q8NEA9 526 aa8.69□□□□□ -1.02
CPSF7-224ENST00000544990 SHCBP1Q8NEM2 672 aa8.69□□□□□ -1.02
CPSF7-224ENST00000544990 STAG1Q8WVM7 1258 aa8.69□□□□□ -1.02
CPSF7-224ENST00000544990 ATG4CQ96DT6 458 aa8.69□□□□□ -1.02
CPSF7-224ENST00000544990 MTRQ99707 1265 aa8.69□□□□□ -1.02
CPSF7-224ENST00000544990 SLF1Q9BQI6 1058 aa8.69□□□□□ -1.02
CPSF7-224ENST00000544990 SPATC1LQ9H0A9 340 aa8.69□□□□□ -1.02
CPSF7-224ENST00000544990 PORCNQ9H237 461 aa8.69□□□□□ -1.02
CPSF7-224ENST00000544990 INCENPQ9NQS7 918 aa8.69□□□□□ -1.02
CPSF7-224ENST00000544990 TCP11L1Q9NUJ3 509 aa8.69□□□□□ -1.02
CPSF7-224ENST00000544990 FKBPLQ9UIM3 349 aa8.69□□□□□ -1.02
CPSF7-224ENST00000544990 PPP1R9AQ9ULJ8 1098 aa8.69□□□□□ -1.02
CPSF7-224ENST00000544990 CTDP1Q9Y5B0 961 aaPredicted RBP8.69□□□□□ -1.02
CPSF7-224ENST00000544990 PLXNB2O15031 1838 aa8.68□□□□□ -1.02
CPSF7-224ENST00000544990 COL11A1P12107 1806 aaPredicted RBP8.68□□□□□ -1.02
CPSF7-224ENST00000544990 SLC15A5A6NIM6 579 aa8.68□□□□□ -1.02
CPSF7-224ENST00000544990 VWA5AO00534 786 aa8.68□□□□□ -1.02
CPSF7-224ENST00000544990 SLC25A27O95847 323 aa8.68□□□□□ -1.02
CPSF7-224ENST00000544990 BMP3P12645 472 aa8.68□□□□□ -1.02
CPSF7-224ENST00000544990 ELNP15502 786 aa8.68□□□□□ -1.02
CPSF7-224ENST00000544990 CAPN2P17655 700 aa8.68□□□□□ -1.02
CPSF7-224ENST00000544990 COPB2P35606 906 aa8.68□□□□□ -1.02
CPSF7-224ENST00000544990 CCDC178Q5BJE1 867 aa8.68□□□□□ -1.02
CPSF7-224ENST00000544990 LRRC47Q8N1G4 583 aaKnown RBP8.68□□□□□ -1.02
CPSF7-224ENST00000544990 FAM160A2Q8N612 972 aaPredicted RBP8.68□□□□□ -1.02
CPSF7-224ENST00000544990 NKX2-3Q8TAU0 364 aa8.68□□□□□ -1.02
CPSF7-224ENST00000544990 ESR2Q92731 530 aa8.68□□□□□ -1.02
CPSF7-224ENST00000544990 TTC14Q96N46 770 aa8.68□□□□□ -1.02
CPSF7-224ENST00000544990 MOV10L1Q9BXT6 1211 aaKnown RBP8.68□□□□□ -1.02
CPSF7-224ENST00000544990 RNF208Q9H0X6 261 aa8.68□□□□□ -1.02
CPSF7-224ENST00000544990 MROH8Q9H579 483 aa8.68□□□□□ -1.02
CPSF7-224ENST00000544990 IL17RBQ9NRM6 502 aa8.68□□□□□ -1.02
CPSF7-224ENST00000544990 SLC5A4Q9NY91 659 aa8.68□□□□□ -1.02
CPSF7-224ENST00000544990 FEM1BQ9UK73 627 aa8.68□□□□□ -1.02
CPSF7-224ENST00000544990 ISY1Q9ULR0 285 aaKnown RBP8.68□□□□□ -1.02
CPSF7-224ENST00000544990 ADAMTS5Q9UNA0 930 aa8.68□□□□□ -1.02
CPSF7-224ENST00000544990 LAMA4Q16363 1823 aa8.68□□□□□ -1.02
CPSF7-224ENST00000544990 KIAA0100Q14667 2235 aaKnown RBP8.68□□□□□ -1.02
CPSF7-224ENST00000544990 A0A0G2JMZ2 1700 aa8.67□□□□□ -1.02
CPSF7-224ENST00000544990 ZBED4O75132 1171 aa8.67□□□□□ -1.02
CPSF7-224ENST00000544990 DXOO77932 396 aaKnown RBP8.67□□□□□ -1.02
CPSF7-224ENST00000544990 HMGCRP04035 888 aa8.67□□□□□ -1.02
CPSF7-224ENST00000544990 INHAP05111 366 aa8.67□□□□□ -1.02
CPSF7-224ENST00000544990 GJB1P08034 283 aa8.67□□□□□ -1.02
CPSF7-224ENST00000544990 TOP1P11387 765 aaKnown RBP8.67□□□□□ -1.02
CPSF7-224ENST00000544990 CCL5P13501 91 aa8.67□□□□□ -1.02
CPSF7-224ENST00000544990 ERCC3P19447 782 aa8.67□□□□□ -1.02
CPSF7-224ENST00000544990 STAT3P40763 770 aa8.67□□□□□ -1.02
CPSF7-224ENST00000544990 SLC1A4P43007 532 aa8.67□□□□□ -1.02
CPSF7-224ENST00000544990 MMP16P51512 607 aa8.67□□□□□ -1.02
CPSF7-224ENST00000544990 IKQ13123 557 aaPredicted RBP8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms