RNA–Protein interactions for RNA: ENST00000544040.5

CHD4-210, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD4, Length 6,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-210ENST00000544040 RINT1Q6NUQ1 792 aa16.86■□□□□ 0.29
CHD4-210ENST00000544040 EPB41L5Q9HCM4 733 aa16.86■□□□□ 0.29
CHD4-210ENST00000544040 TBK1Q9UHD2 729 aa16.86■□□□□ 0.29
CHD4-210ENST00000544040 EPN1Q9Y6I3 576 aaPredicted RBP16.86■□□□□ 0.29
CHD4-210ENST00000544040 SLCO1A2P46721 670 aa16.86■□□□□ 0.29
CHD4-210ENST00000544040 ZNF790Q6PG37 636 aa16.86■□□□□ 0.29
CHD4-210ENST00000544040 A1BGP04217 495 aa16.86■□□□□ 0.29
CHD4-210ENST00000544040 CXCR5P32302 372 aa16.86■□□□□ 0.29
CHD4-210ENST00000544040 SYMPKQ92797 1274 aaKnown RBP16.85■□□□□ 0.29
CHD4-210ENST00000544040 ATP8A1Q9Y2Q0 1164 aa16.85■□□□□ 0.29
CHD4-210ENST00000544040 SH3TC1Q8TE82 1336 aa16.85■□□□□ 0.29
CHD4-210ENST00000544040 TMOD1P28289 359 aa16.85■□□□□ 0.29
CHD4-210ENST00000544040 TPCN1Q9ULQ1 816 aa16.85■□□□□ 0.29
CHD4-210ENST00000544040 EEF1B2P24534 225 aaKnown RBP16.85■□□□□ 0.29
CHD4-210ENST00000544040 KIF11P52732 1056 aa16.85■□□□□ 0.29
CHD4-210ENST00000544040 JPH2Q9BR39 696 aaPredicted RBP16.85■□□□□ 0.29
CHD4-210ENST00000544040 HAUS4Q9H6D7 363 aa16.85■□□□□ 0.29
CHD4-210ENST00000544040 DDX25Q9UHL0 483 aaKnown RBP16.85■□□□□ 0.29
CHD4-210ENST00000544040 RIMS2Q9UQ26 1411 aa16.85■□□□□ 0.29
CHD4-210ENST00000544040 ZNF500O60304 480 aaPredicted RBP16.85■□□□□ 0.29
CHD4-210ENST00000544040 S100BP04271 92 aaPredicted RBP16.85■□□□□ 0.29
CHD4-210ENST00000544040 DPP8Q6V1X1 898 aaPredicted RBP16.85■□□□□ 0.29
CHD4-210ENST00000544040 CDKL2Q92772 493 aa16.85■□□□□ 0.29
CHD4-210ENST00000544040 CCDC138Q96M89 665 aa16.85■□□□□ 0.29
CHD4-210ENST00000544040 MLXIPQ9HAP2 919 aa16.85■□□□□ 0.29
CHD4-210ENST00000544040 PCDHA12Q9UN75 941 aa16.85■□□□□ 0.29
CHD4-210ENST00000544040 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.85■□□□□ 0.29
CHD4-210ENST00000544040 HSP90AA5PQ58FG0 334 aa16.85■□□□□ 0.29
CHD4-210ENST00000544040 CYP4F22Q6NT55 531 aa16.85■□□□□ 0.29
CHD4-210ENST00000544040 ARMCX5Q6P1M9 558 aa16.85■□□□□ 0.29
CHD4-210ENST00000544040 PCDHA7Q9UN72 937 aa16.85■□□□□ 0.29
CHD4-210ENST00000544040 WDR91A4D1P6 747 aa16.84■□□□□ 0.29
CHD4-210ENST00000544040 H2AFZP0C0S5 128 aa16.84■□□□□ 0.29
CHD4-210ENST00000544040 TCP11X2Q5H9J9 407 aa16.84■□□□□ 0.29
CHD4-210ENST00000544040 H2AFVQ71UI9 128 aa16.84■□□□□ 0.29
CHD4-210ENST00000544040 LRRC47Q8N1G4 583 aaKnown RBP16.84■□□□□ 0.29
CHD4-210ENST00000544040 MAGOHBQ96A72 148 aaKnown RBP16.84■□□□□ 0.29
CHD4-210ENST00000544040 ZSCAN10Q96SZ4 725 aaPredicted RBP16.84■□□□□ 0.29
CHD4-210ENST00000544040 PSTPIP2Q9H939 334 aa16.84■□□□□ 0.29
CHD4-210ENST00000544040 THEGQ9P2T0 379 aa16.84■□□□□ 0.29
CHD4-210ENST00000544040 FAM47CQ5HY64 1035 aa16.84■□□□□ 0.29
CHD4-210ENST00000544040 DISC1Q9NRI5 854 aa16.84■□□□□ 0.29
CHD4-210ENST00000544040 ANGPTL3Q9Y5C1 460 aa16.84■□□□□ 0.29
CHD4-210ENST00000544040 GSTA4O15217 222 aa16.84■□□□□ 0.29
CHD4-210ENST00000544040 TAF11Q15544 211 aa16.84■□□□□ 0.29
CHD4-210ENST00000544040 GJA10Q969M2 543 aa16.84■□□□□ 0.29
CHD4-210ENST00000544040 A6NJR5 290 aa16.84■□□□□ 0.29
CHD4-210ENST00000544040 DNAJC8O75937 253 aaPredicted RBP16.84■□□□□ 0.29
CHD4-210ENST00000544040 RBL2Q08999 1139 aa16.84■□□□□ 0.29
CHD4-210ENST00000544040 FAM178BQ8IXR5 827 aa16.84■□□□□ 0.29
CHD4-210ENST00000544040 TEKT1Q969V4 418 aa16.84■□□□□ 0.29
CHD4-210ENST00000544040 CNOT6LQ96LI5 555 aaKnown RBP16.84■□□□□ 0.29
CHD4-210ENST00000544040 PAGR1Q9BTK6 254 aa16.84■□□□□ 0.29
CHD4-210ENST00000544040 SUGCTQ9HAC7 445 aa16.84■□□□□ 0.29
CHD4-210ENST00000544040 ABCF3Q9NUQ8 709 aa16.84■□□□□ 0.29
CHD4-210ENST00000544040 ADD1P35611 737 aaKnown RBP16.83■□□□□ 0.29
CHD4-210ENST00000544040 COPB1P53618 953 aaKnown RBP16.83■□□□□ 0.29
CHD4-210ENST00000544040 PLTPP55058 493 aa16.83■□□□□ 0.29
CHD4-210ENST00000544040 SDR42E1Q8WUS8 393 aa16.83■□□□□ 0.29
CHD4-210ENST00000544040 DYNLT1P63172 113 aa16.83■□□□□ 0.29
CHD4-210ENST00000544040 PPP2R5EQ16537 467 aa16.83■□□□□ 0.29
CHD4-210ENST00000544040 ZBTB41Q5SVQ8 909 aa16.83■□□□□ 0.29
CHD4-210ENST00000544040 ATP6V1E2Q96A05 226 aa16.83■□□□□ 0.29
CHD4-210ENST00000544040 FGD4Q96M96 766 aa16.83■□□□□ 0.29
CHD4-210ENST00000544040 LGR6Q9HBX8 967 aa16.83■□□□□ 0.29
CHD4-210ENST00000544040 EPS15L1Q9UBC2 864 aa16.83■□□□□ 0.29
CHD4-210ENST00000544040 MAST3O60307 1309 aa16.83■□□□□ 0.28
CHD4-210ENST00000544040 H7C1D1 291 aa16.83■□□□□ 0.28
CHD4-210ENST00000544040 NSFP46459 744 aaKnown RBP16.83■□□□□ 0.28
CHD4-210ENST00000544040 MYL7Q01449 175 aa16.83■□□□□ 0.28
CHD4-210ENST00000544040 FBXO41Q8TF61 875 aa16.83■□□□□ 0.28
CHD4-210ENST00000544040 DSCC1Q9BVC3 393 aa16.83■□□□□ 0.28
CHD4-210ENST00000544040 ANAPC5Q9UJX4 755 aa16.83■□□□□ 0.28
CHD4-210ENST00000544040 ORC6Q9Y5N6 252 aa16.83■□□□□ 0.28
CHD4-210ENST00000544040 STX1BP61266 288 aa16.83■□□□□ 0.28
CHD4-210ENST00000544040 ZBTB17Q13105 803 aa16.83■□□□□ 0.28
CHD4-210ENST00000544040 PPP2R5BQ15173 497 aa16.83■□□□□ 0.28
CHD4-210ENST00000544040 TRMT10CQ7L0Y3 403 aaKnown RBP16.83■□□□□ 0.28
CHD4-210ENST00000544040 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.83■□□□□ 0.28
CHD4-210ENST00000544040 ABCC1P33527 1531 aa16.83■□□□□ 0.28
CHD4-210ENST00000544040 NVLO15381 856 aaKnown RBP16.83■□□□□ 0.28
CHD4-210ENST00000544040 TRIP13Q15645 432 aaPredicted RBP16.83■□□□□ 0.28
CHD4-210ENST00000544040 SPATA1Q5VX52 437 aa16.83■□□□□ 0.28
CHD4-210ENST00000544040 BBOF1Q8ND07 529 aa16.83■□□□□ 0.28
CHD4-210ENST00000544040 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.83■□□□□ 0.28
CHD4-210ENST00000544040 ZNF277Q9NRM2 450 aaPredicted RBP16.83■□□□□ 0.28
CHD4-210ENST00000544040 A0A087WWV3 80 aa16.82■□□□□ 0.28
CHD4-210ENST00000544040 OR52Z1P0C646 297 aa16.82■□□□□ 0.28
CHD4-210ENST00000544040 PRPSAP1Q14558 356 aa16.82■□□□□ 0.28
CHD4-210ENST00000544040 PDZD4Q76G19 769 aaPredicted RBP16.82■□□□□ 0.28
CHD4-210ENST00000544040 SMYD4Q8IYR2 804 aaPredicted RBP16.82■□□□□ 0.28
CHD4-210ENST00000544040 A0A0D9SFI3 127 aa16.82■□□□□ 0.28
CHD4-210ENST00000544040 TOM1L1O75674 476 aa16.82■□□□□ 0.28
CHD4-210ENST00000544040 IGBP1P78318 339 aa16.82■□□□□ 0.28
CHD4-210ENST00000544040 EP400NLQ6ZTU2 488 aa16.82■□□□□ 0.28
CHD4-210ENST00000544040 LPXNO60711 386 aa16.82■□□□□ 0.28
CHD4-210ENST00000544040 RNF8O76064 485 aa16.82■□□□□ 0.28
CHD4-210ENST00000544040 HEXIM1O94992 359 aaKnown RBP16.82■□□□□ 0.28
CHD4-210ENST00000544040 ALAS1P13196 640 aa16.82■□□□□ 0.28
CHD4-210ENST00000544040 E2F4Q16254 413 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms