RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 CTGFP29279 349 aa16.74■□□□□ 0.27
TNFRSF1A-216ENST00000543995 PLEKHH3Q7Z736 793 aa16.74■□□□□ 0.27
TNFRSF1A-216ENST00000543995 CHST13Q8NET6 341 aa16.74■□□□□ 0.27
TNFRSF1A-216ENST00000543995 RNF26Q9BY78 433 aaPredicted RBP16.74■□□□□ 0.27
TNFRSF1A-216ENST00000543995 ACAD9Q9H845 621 aa16.74■□□□□ 0.27
TNFRSF1A-216ENST00000543995 RBM27Q9P2N5 1060 aaKnown RBP16.74■□□□□ 0.27
TNFRSF1A-216ENST00000543995 FBXO40Q9UH90 709 aa16.74■□□□□ 0.27
TNFRSF1A-216ENST00000543995 PRPF3O43395 683 aaKnown RBP16.73■□□□□ 0.27
TNFRSF1A-216ENST00000543995 PPP1R11O60927 126 aaPredicted RBP16.73■□□□□ 0.27
TNFRSF1A-216ENST00000543995 FCER1AP12319 257 aa16.73■□□□□ 0.27
TNFRSF1A-216ENST00000543995 HEATR3Q7Z4Q2 680 aa16.73■□□□□ 0.27
TNFRSF1A-216ENST00000543995 TMX3Q96JJ7 454 aa16.73■□□□□ 0.27
TNFRSF1A-216ENST00000543995 TRIM47Q96LD4 638 aa16.73■□□□□ 0.27
TNFRSF1A-216ENST00000543995 ABCB11O95342 1321 aa16.73■□□□□ 0.27
TNFRSF1A-216ENST00000543995 KCTD2Q14681 263 aa16.72■□□□□ 0.27
TNFRSF1A-216ENST00000543995 MUM1L1Q5H9M0 696 aa16.72■□□□□ 0.27
TNFRSF1A-216ENST00000543995 ANKRD35Q8N283 1001 aa16.72■□□□□ 0.27
TNFRSF1A-216ENST00000543995 GPKOWQ92917 476 aaPredicted RBP eCLIP16.72■□□□□ 0.27
TNFRSF1A-216ENST00000543995 MMP19Q99542 508 aa16.72■□□□□ 0.27
TNFRSF1A-216ENST00000543995 MRPL11Q9Y3B7 192 aaKnown RBP16.72■□□□□ 0.27
TNFRSF1A-216ENST00000543995 DOCK3Q8IZD9 2030 aa16.72■□□□□ 0.27
TNFRSF1A-216ENST00000543995 ZNFX1Q9P2E3 1918 aaKnown RBP16.72■□□□□ 0.27
TNFRSF1A-216ENST00000543995 STRNO43815 780 aa16.71■□□□□ 0.27
TNFRSF1A-216ENST00000543995 DTNBO60941 627 aa16.71■□□□□ 0.27
TNFRSF1A-216ENST00000543995 CTDNEP1O95476 244 aa16.71■□□□□ 0.27
TNFRSF1A-216ENST00000543995 GNRH1P01148 92 aa16.71■□□□□ 0.27
TNFRSF1A-216ENST00000543995 PTPREP23469 700 aa16.71■□□□□ 0.27
TNFRSF1A-216ENST00000543995 HOXD10P28358 340 aa16.71■□□□□ 0.27
TNFRSF1A-216ENST00000543995 CAP1Q01518 475 aa16.71■□□□□ 0.27
TNFRSF1A-216ENST00000543995 ST3GAL1Q11201 340 aa16.71■□□□□ 0.27
TNFRSF1A-216ENST00000543995 NUDT12Q9BQG2 462 aa16.71■□□□□ 0.27
TNFRSF1A-216ENST00000543995 TRIM17Q9Y577 477 aa16.71■□□□□ 0.27
TNFRSF1A-216ENST00000543995 RBBP6Q7Z6E9 1792 aaKnown RBP16.71■□□□□ 0.27
TNFRSF1A-216ENST00000543995 PTPDC1A2A3K4 754 aa16.7■□□□□ 0.26
TNFRSF1A-216ENST00000543995 NFIBO00712 420 aa16.7■□□□□ 0.26
TNFRSF1A-216ENST00000543995 DEXIO95424 95 aa16.7■□□□□ 0.26
TNFRSF1A-216ENST00000543995 SCG2P13521 617 aa16.7■□□□□ 0.26
TNFRSF1A-216ENST00000543995 PFKFB3Q16875 520 aaPredicted RBP16.7■□□□□ 0.26
TNFRSF1A-216ENST00000543995 NSMFQ6X4W1 530 aa16.7■□□□□ 0.26
TNFRSF1A-216ENST00000543995 HSCBQ8IWL3 235 aa16.7■□□□□ 0.26
TNFRSF1A-216ENST00000543995 SNX21Q969T3 373 aa16.7■□□□□ 0.26
TNFRSF1A-216ENST00000543995 DDX11Q96FC9 970 aa16.7■□□□□ 0.26
TNFRSF1A-216ENST00000543995 SLC15A5A6NIM6 579 aa16.7■□□□□ 0.26
TNFRSF1A-216ENST00000543995 hCG_1984214I3L0E3 225 aa16.7■□□□□ 0.26
TNFRSF1A-216ENST00000543995 ADORA2AP29274 412 aa16.7■□□□□ 0.26
TNFRSF1A-216ENST00000543995 NAPAP54920 295 aa16.7■□□□□ 0.26
TNFRSF1A-216ENST00000543995 WWC2Q6AWC2 1192 aa16.7■□□□□ 0.26
TNFRSF1A-216ENST00000543995 ZNF713Q8N859 430 aaPredicted RBP16.7■□□□□ 0.26
TNFRSF1A-216ENST00000543995 NSUN7Q8NE18 718 aaKnown RBP16.7■□□□□ 0.26
TNFRSF1A-216ENST00000543995 SOCS4Q8WXH5 440 aa16.7■□□□□ 0.26
TNFRSF1A-216ENST00000543995 CLEC4DQ8WXI8 215 aa16.7■□□□□ 0.26
TNFRSF1A-216ENST00000543995 LLPHQ9BRT6 129 aaKnown RBP16.7■□□□□ 0.26
TNFRSF1A-216ENST00000543995 K7ELQ4 463 aaPredicted RBP16.69■□□□□ 0.26
TNFRSF1A-216ENST00000543995 JAK2O60674 1132 aa16.69■□□□□ 0.26
TNFRSF1A-216ENST00000543995 PRKCZQ05513 592 aa16.69■□□□□ 0.26
TNFRSF1A-216ENST00000543995 GRB14Q14449 540 aa16.69■□□□□ 0.26
TNFRSF1A-216ENST00000543995 PKN1Q16512 942 aa16.69■□□□□ 0.26
TNFRSF1A-216ENST00000543995 RNF207Q6ZRF8 634 aa16.69■□□□□ 0.26
TNFRSF1A-216ENST00000543995 OTOP1Q7RTM1 612 aa16.69■□□□□ 0.26
TNFRSF1A-216ENST00000543995 DPP9Q86TI2 863 aa16.69■□□□□ 0.26
TNFRSF1A-216ENST00000543995 MCF2L2Q86YR7 1114 aa16.69■□□□□ 0.26
TNFRSF1A-216ENST00000543995 ABRAQ8N0Z2 381 aa16.69■□□□□ 0.26
TNFRSF1A-216ENST00000543995 A1CFQ9NQ94 594 aaKnown RBP16.69■□□□□ 0.26
TNFRSF1A-216ENST00000543995 PRDM10Q9NQV6 1147 aa16.69■□□□□ 0.26
TNFRSF1A-216ENST00000543995 BARHL2Q9NY43 387 aa16.69■□□□□ 0.26
TNFRSF1A-216ENST00000543995 ORC3Q9UBD5 711 aaPredicted RBP16.69■□□□□ 0.26
TNFRSF1A-216ENST00000543995 GABRQQ9UN88 632 aa16.69■□□□□ 0.26
TNFRSF1A-216ENST00000543995 PFASO15067 1338 aa16.69■□□□□ 0.26
TNFRSF1A-216ENST00000543995 STK36Q9NRP7 1315 aa16.69■□□□□ 0.26
TNFRSF1A-216ENST00000543995 CFBP00751 764 aa16.68■□□□□ 0.26
TNFRSF1A-216ENST00000543995 RGS2P41220 211 aa16.68■□□□□ 0.26
TNFRSF1A-216ENST00000543995 FLT3LGP49771 235 aa16.68■□□□□ 0.26
TNFRSF1A-216ENST00000543995 MORN1Q5T089 497 aa16.68■□□□□ 0.26
TNFRSF1A-216ENST00000543995 WASF1Q92558 559 aa16.68■□□□□ 0.26
TNFRSF1A-216ENST00000543995 SLC5A4Q9NY91 659 aa16.68■□□□□ 0.26
TNFRSF1A-216ENST00000543995 SRRDQ9UH36 339 aa16.68■□□□□ 0.26
TNFRSF1A-216ENST00000543995 STXBP3O00186 592 aa16.67■□□□□ 0.26
TNFRSF1A-216ENST00000543995 PGK2P07205 417 aa16.67■□□□□ 0.26
TNFRSF1A-216ENST00000543995 CYP2B6P20813 491 aa16.67■□□□□ 0.26
TNFRSF1A-216ENST00000543995 CALML3P27482 149 aa16.67■□□□□ 0.26
TNFRSF1A-216ENST00000543995 MAP2K5Q13163 448 aa16.67■□□□□ 0.26
TNFRSF1A-216ENST00000543995 BAATQ14032 418 aaPredicted RBP16.67■□□□□ 0.26
TNFRSF1A-216ENST00000543995 CTU1Q7Z7A3 348 aaKnown RBP16.67■□□□□ 0.26
TNFRSF1A-216ENST00000543995 CCDC12Q8WUD4 166 aaPredicted RBP16.67■□□□□ 0.26
TNFRSF1A-216ENST00000543995 CYP39A1Q9NYL5 469 aa16.67■□□□□ 0.26
TNFRSF1A-216ENST00000543995 VPS54Q9P1Q0 977 aa16.67■□□□□ 0.26
TNFRSF1A-216ENST00000543995 GJD2Q9UKL4 321 aa16.67■□□□□ 0.26
TNFRSF1A-216ENST00000543995 ZNF236Q9UL36 1845 aa16.67■□□□□ 0.26
TNFRSF1A-216ENST00000543995 PLXNA1Q9UIW2 1896 aa16.67■□□□□ 0.26
TNFRSF1A-216ENST00000543995 POTEB2H3BUK9 544 aa16.66■□□□□ 0.26
TNFRSF1A-216ENST00000543995 XBP1P17861 261 aa16.66■□□□□ 0.26
TNFRSF1A-216ENST00000543995 PRMT2P55345 433 aa16.66■□□□□ 0.26
TNFRSF1A-216ENST00000543995 RPS6P62753 249 aaKnown RBP16.66■□□□□ 0.26
TNFRSF1A-216ENST00000543995 HMGN5P82970 282 aaKnown RBP16.66■□□□□ 0.26
TNFRSF1A-216ENST00000543995 PPP1R18Q6NYC8 613 aa16.66■□□□□ 0.26
TNFRSF1A-216ENST00000543995 SLC30A10Q6XR72 485 aa16.66■□□□□ 0.26
TNFRSF1A-216ENST00000543995 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.66■□□□□ 0.26
TNFRSF1A-216ENST00000543995 FAM184AQ8NB25 1140 aa16.66■□□□□ 0.26
TNFRSF1A-216ENST00000543995 RGS22Q8NE09 1264 aa16.66■□□□□ 0.26
TNFRSF1A-216ENST00000543995 CCDC148Q8NFR7 591 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms