RNA–Protein interactions for RNA: ENST00000543939.5

COPS7A-218, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,728 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-218ENST00000543939 ZYXQ15942 572 aaKnown RBP22.53■■□□□ 1.2
COPS7A-218ENST00000543939 C11orf57Q6ZUT1 292 aaPredicted RBP22.53■■□□□ 1.2
COPS7A-218ENST00000543939 PDILTQ8N807 584 aa22.53■■□□□ 1.2
COPS7A-218ENST00000543939 CHURC1Q8WUH1 139 aa22.53■■□□□ 1.2
COPS7A-218ENST00000543939 PDLIM2Q96JY6 352 aa22.53■■□□□ 1.2
COPS7A-218ENST00000543939 SMCHD1A6NHR9 2005 aa22.52■■□□□ 1.2
COPS7A-218ENST00000543939 A0A087WWV3 80 aa22.52■■□□□ 1.2
COPS7A-218ENST00000543939 INPP5BP32019 993 aa22.52■■□□□ 1.2
COPS7A-218ENST00000543939 PNOCQ13519 176 aa22.52■■□□□ 1.2
COPS7A-218ENST00000543939 DTHD1Q6ZMT9 781 aa22.52■■□□□ 1.2
COPS7A-218ENST00000543939 NEMFO60524 1076 aa22.51■■□□□ 1.19
COPS7A-218ENST00000543939 KANK3Q6NY19 840 aa22.51■■□□□ 1.19
COPS7A-218ENST00000543939 LUZP1Q86V48 1076 aa22.51■■□□□ 1.19
COPS7A-218ENST00000543939 FAM160B2Q86V87 743 aa22.51■■□□□ 1.19
COPS7A-218ENST00000543939 FEZ1Q99689 392 aa22.51■■□□□ 1.19
COPS7A-218ENST00000543939 KIAA1683Q9H0B3 1180 aa22.51■■□□□ 1.19
COPS7A-218ENST00000543939 HOOK1Q9UJC3 728 aaKnown RBP22.51■■□□□ 1.19
COPS7A-218ENST00000543939 FOXN1O15353 648 aa22.51■■□□□ 1.19
COPS7A-218ENST00000543939 OR52Z1P0C646 297 aa22.51■■□□□ 1.19
COPS7A-218ENST00000543939 PRAMEF18Q5VWM3 479 aa22.51■■□□□ 1.19
COPS7A-218ENST00000543939 C9orf131Q5VYM1 1079 aa22.51■■□□□ 1.19
COPS7A-218ENST00000543939 RANBP17Q9H2T7 1088 aaKnown RBP22.51■■□□□ 1.19
COPS7A-218ENST00000543939 USP25Q9UHP3 1055 aa22.51■■□□□ 1.19
COPS7A-218ENST00000543939 FEM1BQ9UK73 627 aa22.51■■□□□ 1.19
COPS7A-218ENST00000543939 PITPNM2Q9BZ72 1349 aa22.5■■□□□ 1.19
COPS7A-218ENST00000543939 USP17L15C9J2P7 530 aa22.5■■□□□ 1.19
COPS7A-218ENST00000543939 USP17L13C9JLJ4 530 aa22.5■■□□□ 1.19
COPS7A-218ENST00000543939 USP17L11C9JVI0 530 aa22.5■■□□□ 1.19
COPS7A-218ENST00000543939 USP17L18D6R9N7 530 aa22.5■■□□□ 1.19
COPS7A-218ENST00000543939 USP17L22D6RA61 530 aa22.5■■□□□ 1.19
COPS7A-218ENST00000543939 USP17L17D6RBQ6 530 aa22.5■■□□□ 1.19
COPS7A-218ENST00000543939 USP17L19D6RCP7 530 aa22.5■■□□□ 1.19
COPS7A-218ENST00000543939 USP17L20D6RJB6 530 aa22.5■■□□□ 1.19
COPS7A-218ENST00000543939 NLRP12P59046 1061 aa22.5■■□□□ 1.19
COPS7A-218ENST00000543939 USP17L24Q0WX57 530 aa22.5■■□□□ 1.19
COPS7A-218ENST00000543939 USP17L6PQ6QN14 398 aa22.5■■□□□ 1.19
COPS7A-218ENST00000543939 DHX58Q96C10 678 aa22.5■■□□□ 1.19
COPS7A-218ENST00000543939 ADARB2Q9NS39 739 aaKnown RBP22.5■■□□□ 1.19
COPS7A-218ENST00000543939 MEIS2O14770 477 aa22.49■■□□□ 1.19
COPS7A-218ENST00000543939 SLFN14P0C7P3 912 aa22.49■■□□□ 1.19
COPS7A-218ENST00000543939 LMOD1P29536 600 aaPredicted RBP22.49■■□□□ 1.19
COPS7A-218ENST00000543939 TRAF1Q13077 416 aa22.49■■□□□ 1.19
COPS7A-218ENST00000543939 IQCB1Q15051 598 aa22.49■■□□□ 1.19
COPS7A-218ENST00000543939 POSTNQ15063 836 aa22.49■■□□□ 1.19
COPS7A-218ENST00000543939 USH1GQ495M9 461 aa22.49■■□□□ 1.19
COPS7A-218ENST00000543939 SCYL3Q8IZE3 742 aa22.49■■□□□ 1.19
COPS7A-218ENST00000543939 LPAR1Q92633 364 aa22.49■■□□□ 1.19
COPS7A-218ENST00000543939 SSC5DA1L4H1 1573 aa22.49■■□□□ 1.19
COPS7A-218ENST00000543939 ZRSR1Q15695 479 aaKnown RBP22.48■■□□□ 1.19
COPS7A-218ENST00000543939 E2F4Q16254 413 aa22.48■■□□□ 1.19
COPS7A-218ENST00000543939 MCTP2Q6DN12 878 aa22.48■■□□□ 1.19
COPS7A-218ENST00000543939 PPP4R3AQ6IN85 833 aa22.48■■□□□ 1.19
COPS7A-218ENST00000543939 ILDR2Q71H61 639 aa22.48■■□□□ 1.19
COPS7A-218ENST00000543939 CEP57L1Q8IYX8 460 aa22.48■■□□□ 1.19
COPS7A-218ENST00000543939 KIFC2Q96AC6 838 aa22.48■■□□□ 1.19
COPS7A-218ENST00000543939 PYM1Q9BRP8 204 aaKnown RBP22.48■■□□□ 1.19
COPS7A-218ENST00000543939 PCDHA5Q9Y5H7 936 aa22.48■■□□□ 1.19
COPS7A-218ENST00000543939 PHIPQ8WWQ0 1821 aa22.48■■□□□ 1.19
COPS7A-218ENST00000543939 BIN1O00499 593 aa22.48■■□□□ 1.19
COPS7A-218ENST00000543939 OPLAHO14841 1288 aa22.48■■□□□ 1.19
COPS7A-218ENST00000543939 WDR46O15213 610 aaKnown RBP22.48■■□□□ 1.19
COPS7A-218ENST00000543939 AP3B2Q13367 1082 aa22.48■■□□□ 1.19
COPS7A-218ENST00000543939 DPCR1Q3MIW9 517 aa22.48■■□□□ 1.19
COPS7A-218ENST00000543939 SH3RF1Q7Z6J0 888 aa22.48■■□□□ 1.19
COPS7A-218ENST00000543939 POTEDQ86YR6 584 aa22.48■■□□□ 1.19
COPS7A-218ENST00000543939 MTMR9Q96QG7 549 aa22.48■■□□□ 1.19
COPS7A-218ENST00000543939 TDP2O95551 362 aa22.47■■□□□ 1.19
COPS7A-218ENST00000543939 PRR29P0C7W0 189 aa22.47■■□□□ 1.19
COPS7A-218ENST00000543939 NT5DC1Q5TFE4 455 aa22.47■■□□□ 1.19
COPS7A-218ENST00000543939 WRNIP1Q96S55 665 aa22.47■■□□□ 1.19
COPS7A-218ENST00000543939 WDR18Q9BV38 432 aa22.47■■□□□ 1.19
COPS7A-218ENST00000543939 ANO3Q9BYT9 981 aa22.47■■□□□ 1.19
COPS7A-218ENST00000543939 FBXO28Q9NVF7 368 aa22.47■■□□□ 1.19
COPS7A-218ENST00000543939 SLC37A4O43826 429 aa22.46■■□□□ 1.19
COPS7A-218ENST00000543939 TAL1P17542 331 aaPredicted RBP22.46■■□□□ 1.19
COPS7A-218ENST00000543939 TXLNAP40222 546 aa22.46■■□□□ 1.19
COPS7A-218ENST00000543939 SARSP49591 514 aaKnown RBP22.46■■□□□ 1.19
COPS7A-218ENST00000543939 TEX2Q8IWB9 1127 aa22.46■■□□□ 1.19
COPS7A-218ENST00000543939 IQUBQ8NA54 791 aa22.46■■□□□ 1.19
COPS7A-218ENST00000543939 CCDC34Q96HJ3 373 aa22.46■■□□□ 1.19
COPS7A-218ENST00000543939 AK8Q96MA6 479 aa22.46■■□□□ 1.19
COPS7A-218ENST00000543939 CCSER1Q9C0I3 900 aa22.46■■□□□ 1.19
COPS7A-218ENST00000543939 NAT10Q9H0A0 1025 aaKnown RBP22.46■■□□□ 1.19
COPS7A-218ENST00000543939 AP5Z1O43299 807 aa22.45■■□□□ 1.19
COPS7A-218ENST00000543939 SUPT20HL1Q3ZLR7 823 aa22.45■■□□□ 1.19
COPS7A-218ENST00000543939 GRAMD1CQ8IYS0 662 aa22.45■■□□□ 1.19
COPS7A-218ENST00000543939 ZKSCAN4Q969J2 545 aaPredicted RBP22.45■■□□□ 1.19
COPS7A-218ENST00000543939 PAGE5Q96GU1 130 aa22.45■■□□□ 1.19
COPS7A-218ENST00000543939 P2RX7Q99572 595 aaKnown RBP22.45■■□□□ 1.19
COPS7A-218ENST00000543939 NAP1L4Q99733 375 aaKnown RBP22.45■■□□□ 1.19
COPS7A-218ENST00000543939 BPIFA3Q9BQP9 254 aa22.45■■□□□ 1.19
COPS7A-218ENST00000543939 GCFC2P16383 781 aaKnown RBP22.45■■□□□ 1.18
COPS7A-218ENST00000543939 CDC25AP30304 524 aa22.45■■□□□ 1.18
COPS7A-218ENST00000543939 CALCRLQ16602 461 aa22.45■■□□□ 1.18
COPS7A-218ENST00000543939 CCDC174Q6PII3 467 aa22.45■■□□□ 1.18
COPS7A-218ENST00000543939 SPATA20Q8TB22 786 aa22.45■■□□□ 1.18
COPS7A-218ENST00000543939 KLRG1Q96E93 195 aa22.45■■□□□ 1.18
COPS7A-218ENST00000543939 PP2D1A8MPX8 630 aa22.44■■□□□ 1.18
COPS7A-218ENST00000543939 PIK3CDO00329 1044 aa22.44■■□□□ 1.18
COPS7A-218ENST00000543939 FOSP01100 380 aaPredicted RBP22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms