RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 PTCH1Q13635 1447 aa7.62□□□□□ -1.19
SRGAP1-206ENST00000543397 CDHR2Q9BYE9 1310 aa7.62□□□□□ -1.19
SRGAP1-206ENST00000543397 AKR1B15C9JRZ8 316 aaPredicted RBP7.62□□□□□ -1.19
SRGAP1-206ENST00000543397 CYP2J2P51589 502 aa7.62□□□□□ -1.19
SRGAP1-206ENST00000543397 ASIC2Q16515 512 aa7.62□□□□□ -1.19
SRGAP1-206ENST00000543397 APOA5Q6Q788 366 aa7.62□□□□□ -1.19
SRGAP1-206ENST00000543397 CCDC84Q86UT8 332 aaPredicted RBP7.62□□□□□ -1.19
SRGAP1-206ENST00000543397 CEP112Q8N8E3 955 aa7.62□□□□□ -1.19
SRGAP1-206ENST00000543397 ZNF577Q9BSK1 485 aa7.62□□□□□ -1.19
SRGAP1-206ENST00000543397 WDR11Q9BZH6 1224 aa7.62□□□□□ -1.19
SRGAP1-206ENST00000543397 RABGAP1Q9Y3P9 1069 aa7.62□□□□□ -1.19
SRGAP1-206ENST00000543397 ZHX2Q9Y6X8 837 aa7.62□□□□□ -1.19
SRGAP1-206ENST00000543397 hCG_1984214I3L0E3 225 aa7.61□□□□□ -1.19
SRGAP1-206ENST00000543397 ZNF713Q8N859 430 aaPredicted RBP7.61□□□□□ -1.19
SRGAP1-206ENST00000543397 BLZF1Q9H2G9 400 aa7.61□□□□□ -1.19
SRGAP1-206ENST00000543397 SEPT9Q9UHD8 586 aaPredicted RBP7.61□□□□□ -1.19
SRGAP1-206ENST00000543397 AKT3Q9Y243 479 aa7.61□□□□□ -1.19
SRGAP1-206ENST00000543397 M0R2C6 588 aa7.61□□□□□ -1.19
SRGAP1-206ENST00000543397 NDC80O14777 642 aa7.61□□□□□ -1.19
SRGAP1-206ENST00000543397 XPOTO43592 962 aaKnown RBP7.61□□□□□ -1.19
SRGAP1-206ENST00000543397 PRDX5P30044 214 aa7.61□□□□□ -1.19
SRGAP1-206ENST00000543397 CHRNA5P30532 468 aa7.61□□□□□ -1.19
SRGAP1-206ENST00000543397 CDK8P49336 464 aa7.61□□□□□ -1.19
SRGAP1-206ENST00000543397 NT5C2P49902 561 aa7.61□□□□□ -1.19
SRGAP1-206ENST00000543397 SP8Q8IXZ3 490 aa7.61□□□□□ -1.19
SRGAP1-206ENST00000543397 MYOCDQ8IZQ8 938 aa7.61□□□□□ -1.19
SRGAP1-206ENST00000543397 PUS7LQ9H0K6 701 aaKnown RBP7.61□□□□□ -1.19
SRGAP1-206ENST00000543397 CSRNP2Q9H175 543 aa7.61□□□□□ -1.19
SRGAP1-206ENST00000543397 LZTFL1Q9NQ48 299 aa7.61□□□□□ -1.19
SRGAP1-206ENST00000543397 ZNF215Q9UL58 517 aaPredicted RBP7.61□□□□□ -1.19
SRGAP1-206ENST00000543397 LRFN2Q9ULH4 789 aa7.61□□□□□ -1.19
SRGAP1-206ENST00000543397 CD2APQ9Y5K6 639 aa7.61□□□□□ -1.19
SRGAP1-206ENST00000543397 IGKV5-2P06315 115 aa7.61□□□□□ -1.19
SRGAP1-206ENST00000543397 CYP21A2P08686 494 aa7.61□□□□□ -1.19
SRGAP1-206ENST00000543397 TMEM191BP0C7N4 346 aa7.61□□□□□ -1.19
SRGAP1-206ENST00000543397 ATP2A2P16615 1042 aaKnown RBP7.61□□□□□ -1.19
SRGAP1-206ENST00000543397 PPP1R7Q15435 360 aa7.61□□□□□ -1.19
SRGAP1-206ENST00000543397 SLC9C1Q4G0N8 1177 aa7.61□□□□□ -1.19
SRGAP1-206ENST00000543397 CTR9Q6PD62 1173 aa7.61□□□□□ -1.19
SRGAP1-206ENST00000543397 CCDC114Q96M63 670 aa7.61□□□□□ -1.19
SRGAP1-206ENST00000543397 ST7Q9NRC1 585 aa7.61□□□□□ -1.19
SRGAP1-206ENST00000543397 XRCC5P13010 732 aaKnown RBP7.61□□□□□ -1.19
SRGAP1-206ENST00000543397 PDIA3P30101 505 aaKnown RBP7.61□□□□□ -1.19
SRGAP1-206ENST00000543397 CCND2P30279 289 aa7.61□□□□□ -1.19
SRGAP1-206ENST00000543397 CCDC122Q5T0U0 273 aa7.61□□□□□ -1.19
SRGAP1-206ENST00000543397 RC3H1Q5TC82 1133 aaKnown RBP7.61□□□□□ -1.19
SRGAP1-206ENST00000543397 NBPF11Q86T75 865 aa7.61□□□□□ -1.19
SRGAP1-206ENST00000543397 NSMCE1Q8WV22 266 aa7.61□□□□□ -1.19
SRGAP1-206ENST00000543397 OSBP2Q969R2 916 aa7.61□□□□□ -1.19
SRGAP1-206ENST00000543397 NUP58Q9BVL2 599 aa7.61□□□□□ -1.19
SRGAP1-206ENST00000543397 TSGA10Q9BZW7 698 aa7.61□□□□□ -1.19
SRGAP1-206ENST00000543397 CLSTN2Q9H4D0 955 aa7.61□□□□□ -1.19
SRGAP1-206ENST00000543397 FAM204AQ9H8W3 233 aa7.61□□□□□ -1.19
SRGAP1-206ENST00000543397 PIH1D3Q9NQM4 214 aaKnown RBP7.61□□□□□ -1.19
SRGAP1-206ENST00000543397 STIM2Q9P246 746 aa7.61□□□□□ -1.19
SRGAP1-206ENST00000543397 EVLQ9UI08 416 aaPredicted RBP7.61□□□□□ -1.19
SRGAP1-206ENST00000543397 NFE2L3Q9Y4A8 694 aa7.61□□□□□ -1.19
SRGAP1-206ENST00000543397 A0A0G2JLW4 131 aa7.61□□□□□ -1.19
SRGAP1-206ENST00000543397 INO80B-WBP1J3KQ70 363 aa7.61□□□□□ -1.19
SRGAP1-206ENST00000543397 GNA14O95837 355 aa7.61□□□□□ -1.19
SRGAP1-206ENST00000543397 GCFC2P16383 781 aaKnown RBP7.61□□□□□ -1.19
SRGAP1-206ENST00000543397 SARNPP82979 210 aaKnown RBP7.61□□□□□ -1.19
SRGAP1-206ENST00000543397 CALCOCO2Q13137 446 aa7.61□□□□□ -1.19
SRGAP1-206ENST00000543397 BARGINQ6ZT62 677 aa7.61□□□□□ -1.19
SRGAP1-206ENST00000543397 COA7Q96BR5 231 aa7.61□□□□□ -1.19
SRGAP1-206ENST00000543397 PIGSQ96S52 555 aa7.61□□□□□ -1.19
SRGAP1-206ENST00000543397 MMS19Q96T76 1030 aa7.61□□□□□ -1.19
SRGAP1-206ENST00000543397 MTA3Q9BTC8 594 aa7.61□□□□□ -1.19
SRGAP1-206ENST00000543397 INO80BQ9C086 356 aaPredicted RBP7.61□□□□□ -1.19
SRGAP1-206ENST00000543397 PAXBP1Q9Y5B6 917 aa7.61□□□□□ -1.19
SRGAP1-206ENST00000543397 E7EVH7 732 aa7.6□□□□□ -1.19
SRGAP1-206ENST00000543397 MIS18BP1Q6P0N0 1132 aa7.6□□□□□ -1.19
SRGAP1-206ENST00000543397 USP17L2Q6R6M4 530 aa7.6□□□□□ -1.19
SRGAP1-206ENST00000543397 SESTD1Q86VW0 696 aa7.6□□□□□ -1.19
SRGAP1-206ENST00000543397 NELFBQ8WX92 580 aa7.6□□□□□ -1.19
SRGAP1-206ENST00000543397 HAUS2Q9NVX0 235 aa7.6□□□□□ -1.19
SRGAP1-206ENST00000543397 FBXO40Q9UH90 709 aa7.6□□□□□ -1.19
SRGAP1-206ENST00000543397 FBXO9Q9UK97 447 aaPredicted RBP7.6□□□□□ -1.19
SRGAP1-206ENST00000543397 TPCN1Q9ULQ1 816 aa7.6□□□□□ -1.19
SRGAP1-206ENST00000543397 CYP2D7A0A087X1C5 515 aa7.6□□□□□ -1.19
SRGAP1-206ENST00000543397 KARSQ15046 597 aaKnown RBP7.6□□□□□ -1.19
SRGAP1-206ENST00000543397 ARMCX5Q6P1M9 558 aa7.6□□□□□ -1.19
SRGAP1-206ENST00000543397 MARCH10Q8NA82 808 aaPredicted RBP7.6□□□□□ -1.19
SRGAP1-206ENST00000543397 MED10Q9BTT4 135 aa7.6□□□□□ -1.19
SRGAP1-206ENST00000543397 APOL6Q9BWW8 343 aa7.6□□□□□ -1.19
SRGAP1-206ENST00000543397 HOXC10Q9NYD6 342 aa7.6□□□□□ -1.19
SRGAP1-206ENST00000543397 ANKFY1Q9P2R3 1169 aa7.6□□□□□ -1.19
SRGAP1-206ENST00000543397 SERTAD1Q9UHV2 236 aa7.6□□□□□ -1.19
SRGAP1-206ENST00000543397 SNAP23O00161 211 aa7.6□□□□□ -1.19
SRGAP1-206ENST00000543397 HNRNPDLO14979 420 aaKnown RBP7.6□□□□□ -1.19
SRGAP1-206ENST00000543397 TUBB4AP04350 444 aa7.6□□□□□ -1.19
SRGAP1-206ENST00000543397 MCAMP43121 646 aa7.6□□□□□ -1.19
SRGAP1-206ENST00000543397 RASA3Q14644 834 aa7.6□□□□□ -1.19
SRGAP1-206ENST00000543397 SLC16A10Q8TF71 515 aa7.6□□□□□ -1.19
SRGAP1-206ENST00000543397 BAG1Q99933 345 aaPredicted RBP7.6□□□□□ -1.19
SRGAP1-206ENST00000543397 CTTNBP2NLQ9P2B4 639 aa7.6□□□□□ -1.19
SRGAP1-206ENST00000543397 HESX1Q9UBX0 185 aa7.6□□□□□ -1.19
SRGAP1-206ENST00000543397 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.6□□□□□ -1.19
SRGAP1-206ENST00000543397 USP17L5A8MUK1 530 aa7.6□□□□□ -1.19
SRGAP1-206ENST00000543397 PTGDRQ13258 359 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms