RNA–Protein interactions for RNA: ENST00000543004.5

OTUB1-211, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 5 BASIC

Gene OTUB1, Length 1,647 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-211ENST00000543004 ARHGAP39Q9C0H5 1083 aa24.03■■□□□ 1.44
OTUB1-211ENST00000543004 PLXNB2O15031 1838 aa24.03■■□□□ 1.44
OTUB1-211ENST00000543004 DEXIO95424 95 aa24.02■■□□□ 1.44
OTUB1-211ENST00000543004 WDR78Q5VTH9 848 aa24.02■■□□□ 1.44
OTUB1-211ENST00000543004 TRERF1Q96PN7 1200 aa24.02■■□□□ 1.44
OTUB1-211ENST00000543004 RNF146Q9NTX7 359 aa24.02■■□□□ 1.44
OTUB1-211ENST00000543004 ZNFX1Q9P2E3 1918 aaKnown RBP24.02■■□□□ 1.44
OTUB1-211ENST00000543004 STK36Q9NRP7 1315 aa24.02■■□□□ 1.44
OTUB1-211ENST00000543004 NFIBO00712 420 aa24.02■■□□□ 1.44
OTUB1-211ENST00000543004 OPLAHO14841 1288 aa24.02■■□□□ 1.44
OTUB1-211ENST00000543004 FOSBP53539 338 aa24.02■■□□□ 1.44
OTUB1-211ENST00000543004 CLEC4DQ8WXI8 215 aa24.02■■□□□ 1.44
OTUB1-211ENST00000543004 VPS54Q9P1Q0 977 aa24.02■■□□□ 1.44
OTUB1-211ENST00000543004 STXBP3O00186 592 aa24.01■■□□□ 1.43
OTUB1-211ENST00000543004 SP3Q02447 781 aa24.01■■□□□ 1.43
OTUB1-211ENST00000543004 RBBP6Q7Z6E9 1792 aaKnown RBP24.01■■□□□ 1.43
OTUB1-211ENST00000543004 TBC1D5Q92609 795 aa24.01■■□□□ 1.43
OTUB1-211ENST00000543004 CCNA1P78396 465 aa24■■□□□ 1.43
OTUB1-211ENST00000543004 ZNF296Q8WUU4 475 aaPredicted RBP24■■□□□ 1.43
OTUB1-211ENST00000543004 BARHL2Q9NY43 387 aa24■■□□□ 1.43
OTUB1-211ENST00000543004 ABCB11O95342 1321 aa23.99■■□□□ 1.43
OTUB1-211ENST00000543004 CASP8AP2Q9UKL3 1982 aa23.99■■□□□ 1.43
OTUB1-211ENST00000543004 ADAMTS3O15072 1205 aa23.99■■□□□ 1.43
OTUB1-211ENST00000543004 FOXN1O15353 648 aa23.99■■□□□ 1.43
OTUB1-211ENST00000543004 SLC25A27O95847 323 aa23.99■■□□□ 1.43
OTUB1-211ENST00000543004 GJB2P29033 226 aa23.99■■□□□ 1.43
OTUB1-211ENST00000543004 LACTBP83111 547 aaPredicted RBP23.99■■□□□ 1.43
OTUB1-211ENST00000543004 ALG1Q9BT22 464 aa23.99■■□□□ 1.43
OTUB1-211ENST00000543004 RBM27Q9P2N5 1060 aaKnown RBP23.99■■□□□ 1.43
OTUB1-211ENST00000543004 HSPA1AP0DMV8 641 aaKnown RBP23.99■■□□□ 1.43
OTUB1-211ENST00000543004 HSPA1BP0DMV9 641 aaKnown RBP23.99■■□□□ 1.43
OTUB1-211ENST00000543004 NAPAP54920 295 aa23.99■■□□□ 1.43
OTUB1-211ENST00000543004 SHCBP1Q8NEM2 672 aa23.99■■□□□ 1.43
OTUB1-211ENST00000543004 CD99L2Q8TCZ2 262 aa23.99■■□□□ 1.43
OTUB1-211ENST00000543004 SMC3Q9UQE7 1217 aa23.99■■□□□ 1.43
OTUB1-211ENST00000543004 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.99■■□□□ 1.43
OTUB1-211ENST00000543004 LCTP09848 1927 aa23.98■■□□□ 1.43
OTUB1-211ENST00000543004 GPR142Q7Z601 462 aa23.98■■□□□ 1.43
OTUB1-211ENST00000543004 CCAR1Q8IX12 1150 aaKnown RBP23.98■■□□□ 1.43
OTUB1-211ENST00000543004 MROH8Q9H579 483 aa23.98■■□□□ 1.43
OTUB1-211ENST00000543004 ACAD9Q9H845 621 aa23.98■■□□□ 1.43
OTUB1-211ENST00000543004 TKFCQ3LXA3 575 aa23.97■■□□□ 1.43
OTUB1-211ENST00000543004 CHST13Q8NET6 341 aa23.97■■□□□ 1.43
OTUB1-211ENST00000543004 TRIM47Q96LD4 638 aa23.97■■□□□ 1.43
OTUB1-211ENST00000543004 KCNJ14Q9UNX9 436 aa23.97■■□□□ 1.43
OTUB1-211ENST00000543004 MRPL11Q9Y3B7 192 aaKnown RBP23.97■■□□□ 1.43
OTUB1-211ENST00000543004 ANP32AP39687 249 aaKnown RBP23.96■■□□□ 1.43
OTUB1-211ENST00000543004 PSMC4P43686 418 aa23.96■■□□□ 1.43
OTUB1-211ENST00000543004 HMGN5P82970 282 aaKnown RBP23.96■■□□□ 1.43
OTUB1-211ENST00000543004 BECN1Q14457 450 aa23.96■■□□□ 1.43
OTUB1-211ENST00000543004 NSMFQ6X4W1 530 aa23.96■■□□□ 1.43
OTUB1-211ENST00000543004 INTS4Q96HW7 963 aaKnown RBP23.96■■□□□ 1.43
OTUB1-211ENST00000543004 A1CFQ9NQ94 594 aaKnown RBP23.96■■□□□ 1.43
OTUB1-211ENST00000543004 FKTNO75072 461 aa23.95■■□□□ 1.43
OTUB1-211ENST00000543004 MAPK4P31152 587 aa23.95■■□□□ 1.43
OTUB1-211ENST00000543004 FAM184AQ8NB25 1140 aa23.95■■□□□ 1.43
OTUB1-211ENST00000543004 PURBQ96QR8 312 aaKnown RBP23.95■■□□□ 1.43
OTUB1-211ENST00000543004 CWC22Q9HCG8 908 aaKnown RBP23.95■■□□□ 1.43
OTUB1-211ENST00000543004 PNMA2Q9UL42 364 aa23.95■■□□□ 1.43
OTUB1-211ENST00000543004 CFBP00751 764 aa23.95■■□□□ 1.42
OTUB1-211ENST00000543004 HSP90AA1P07900 732 aaKnown RBP23.95■■□□□ 1.42
OTUB1-211ENST00000543004 HSPA8P11142 646 aaKnown RBP23.95■■□□□ 1.42
OTUB1-211ENST00000543004 HOXA13P31271 388 aaPredicted RBP23.95■■□□□ 1.42
OTUB1-211ENST00000543004 GUCY1B3Q02153 619 aa23.95■■□□□ 1.42
OTUB1-211ENST00000543004 SLC30A10Q6XR72 485 aa23.95■■□□□ 1.42
OTUB1-211ENST00000543004 PLEKHH3Q7Z736 793 aa23.95■■□□□ 1.42
OTUB1-211ENST00000543004 PLXNA1Q9UIW2 1896 aa23.95■■□□□ 1.42
OTUB1-211ENST00000543004 SMCO2A6NFE2 343 aa23.94■■□□□ 1.42
OTUB1-211ENST00000543004 hCG_1984214I3L0E3 225 aa23.94■■□□□ 1.42
OTUB1-211ENST00000543004 TNPO2O14787 897 aaKnown RBP23.94■■□□□ 1.42
OTUB1-211ENST00000543004 PGK2P07205 417 aa23.94■■□□□ 1.42
OTUB1-211ENST00000543004 COPB2P35606 906 aa23.94■■□□□ 1.42
OTUB1-211ENST00000543004 NOM1Q5C9Z4 860 aaKnown RBP23.94■■□□□ 1.42
OTUB1-211ENST00000543004 USP17L6PQ6QN14 398 aa23.94■■□□□ 1.42
OTUB1-211ENST00000543004 ANKRD35Q8N283 1001 aa23.94■■□□□ 1.42
OTUB1-211ENST00000543004 ZNF713Q8N859 430 aaPredicted RBP23.94■■□□□ 1.42
OTUB1-211ENST00000543004 WASF1Q92558 559 aa23.94■■□□□ 1.42
OTUB1-211ENST00000543004 MMP19Q99542 508 aa23.94■■□□□ 1.42
OTUB1-211ENST00000543004 FBXO40Q9UH90 709 aa23.94■■□□□ 1.42
OTUB1-211ENST00000543004 CENPFP49454 3210 aa23.94■■□□□ 1.42
OTUB1-211ENST00000543004 FCER1AP12319 257 aa23.93■■□□□ 1.42
OTUB1-211ENST00000543004 PTPREP23469 700 aa23.93■■□□□ 1.42
OTUB1-211ENST00000543004 RPS6P62753 249 aaKnown RBP23.93■■□□□ 1.42
OTUB1-211ENST00000543004 TRAF1Q13077 416 aa23.93■■□□□ 1.42
OTUB1-211ENST00000543004 BAATQ14032 418 aaPredicted RBP23.93■■□□□ 1.42
OTUB1-211ENST00000543004 UBE2SQ16763 222 aa23.93■■□□□ 1.42
OTUB1-211ENST00000543004 PSTPIP2Q9H939 334 aa23.93■■□□□ 1.42
OTUB1-211ENST00000543004 CYP39A1Q9NYL5 469 aa23.93■■□□□ 1.42
OTUB1-211ENST00000543004 HTTP42858 3142 aa23.93■■□□□ 1.42
OTUB1-211ENST00000543004 FCGRTP55899 365 aa23.92■■□□□ 1.42
OTUB1-211ENST00000543004 KCTD2Q14681 263 aa23.92■■□□□ 1.42
OTUB1-211ENST00000543004 NPY5RQ15761 445 aa23.92■■□□□ 1.42
OTUB1-211ENST00000543004 PPP1R18Q6NYC8 613 aa23.92■■□□□ 1.42
OTUB1-211ENST00000543004 RNF207Q6ZRF8 634 aa23.92■■□□□ 1.42
OTUB1-211ENST00000543004 ZMYND12Q9H0C1 365 aa23.92■■□□□ 1.42
OTUB1-211ENST00000543004 SH3GLB2Q9NR46 395 aa23.92■■□□□ 1.42
OTUB1-211ENST00000543004 COL20A1Q9P218 1284 aa23.92■■□□□ 1.42
OTUB1-211ENST00000543004 IVNS1ABPQ9Y6Y0 642 aa23.92■■□□□ 1.42
OTUB1-211ENST00000543004 MEIS2O14770 477 aa23.92■■□□□ 1.42
OTUB1-211ENST00000543004 CALML3P27482 149 aa23.92■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms