RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 Q3C1V9 767 aa26.62■■□□□ 1.85
HOMER3-205ENST00000542541 PPP1R18Q6NYC8 613 aa26.62■■□□□ 1.85
HOMER3-205ENST00000542541 CCAR1Q8IX12 1150 aaKnown RBP26.62■■□□□ 1.85
HOMER3-205ENST00000542541 CCDC148Q8NFR7 591 aa26.62■■□□□ 1.85
HOMER3-205ENST00000542541 MOV10L1Q9BXT6 1211 aaKnown RBP26.62■■□□□ 1.85
HOMER3-205ENST00000542541 TRIM29Q14134 588 aa26.61■■□□□ 1.85
HOMER3-205ENST00000542541 SPRYD3Q8NCJ5 442 aa26.61■■□□□ 1.85
HOMER3-205ENST00000542541 SHCBP1Q8NEM2 672 aa26.61■■□□□ 1.85
HOMER3-205ENST00000542541 CHST13Q8NET6 341 aa26.61■■□□□ 1.85
HOMER3-205ENST00000542541 CWC22Q9HCG8 908 aaKnown RBP26.61■■□□□ 1.85
HOMER3-205ENST00000542541 FBXO40Q9UH90 709 aa26.61■■□□□ 1.85
HOMER3-205ENST00000542541 STXBP3O00186 592 aa26.61■■□□□ 1.85
HOMER3-205ENST00000542541 PEX10O60683 326 aa26.61■■□□□ 1.85
HOMER3-205ENST00000542541 PDCP20941 246 aa26.61■■□□□ 1.85
HOMER3-205ENST00000542541 AIFM3Q96NN9 605 aa26.61■■□□□ 1.85
HOMER3-205ENST00000542541 TRERF1Q96PN7 1200 aa26.61■■□□□ 1.85
HOMER3-205ENST00000542541 MROH8Q9H579 483 aa26.61■■□□□ 1.85
HOMER3-205ENST00000542541 A0A0G2JMZ2 1700 aa26.6■■□□□ 1.85
HOMER3-205ENST00000542541 TBC1D8O95759 1140 aa26.6■■□□□ 1.85
HOMER3-205ENST00000542541 NCAPG2Q86XI2 1143 aa26.6■■□□□ 1.85
HOMER3-205ENST00000542541 C8orf76Q96K31 380 aa26.6■■□□□ 1.85
HOMER3-205ENST00000542541 HOMER2Q9NSB8 354 aa26.6■■□□□ 1.85
HOMER3-205ENST00000542541 RNF146Q9NTX7 359 aa26.6■■□□□ 1.85
HOMER3-205ENST00000542541 VPS54Q9P1Q0 977 aa26.6■■□□□ 1.85
HOMER3-205ENST00000542541 RIPK3Q9Y572 518 aa26.6■■□□□ 1.85
HOMER3-205ENST00000542541 MCF2L2Q86YR7 1114 aa26.59■■□□□ 1.85
HOMER3-205ENST00000542541 MAF1Q9H063 256 aa26.59■■□□□ 1.85
HOMER3-205ENST00000542541 GLT8D2Q9H1C3 349 aa26.59■■□□□ 1.85
HOMER3-205ENST00000542541 ERCC3P19447 782 aa26.58■■□□□ 1.85
HOMER3-205ENST00000542541 LARP1BQ659C4 914 aaKnown RBP26.58■■□□□ 1.85
HOMER3-205ENST00000542541 TEX2Q8IWB9 1127 aa26.58■■□□□ 1.85
HOMER3-205ENST00000542541 RGS22Q8NE09 1264 aa26.58■■□□□ 1.85
HOMER3-205ENST00000542541 ACAD9Q9H845 621 aa26.58■■□□□ 1.85
HOMER3-205ENST00000542541 ESYT2A0FGR8 921 aa26.57■■□□□ 1.84
HOMER3-205ENST00000542541 PDIA4P13667 645 aaKnown RBP26.57■■□□□ 1.84
HOMER3-205ENST00000542541 GNA11P29992 359 aa26.57■■□□□ 1.84
HOMER3-205ENST00000542541 NLRP5P59047 1200 aa26.57■■□□□ 1.84
HOMER3-205ENST00000542541 JMYQ8N9B5 988 aa26.57■■□□□ 1.84
HOMER3-205ENST00000542541 IPO9Q96P70 1041 aaKnown RBP26.57■■□□□ 1.84
HOMER3-205ENST00000542541 C6orf50Q9HD87 102 aa26.57■■□□□ 1.84
HOMER3-205ENST00000542541 SMCO2A6NFE2 343 aa26.57■■□□□ 1.84
HOMER3-205ENST00000542541 CALML3P27482 149 aa26.57■■□□□ 1.84
HOMER3-205ENST00000542541 MAPK4P31152 587 aa26.57■■□□□ 1.84
HOMER3-205ENST00000542541 MRPL12P52815 198 aaKnown RBP26.57■■□□□ 1.84
HOMER3-205ENST00000542541 GALNT17Q6IS24 598 aa26.57■■□□□ 1.84
HOMER3-205ENST00000542541 SAMD3Q8N6K7 520 aa26.57■■□□□ 1.84
HOMER3-205ENST00000542541 ZMYND12Q9H0C1 365 aa26.57■■□□□ 1.84
HOMER3-205ENST00000542541 R3HDMLQ9H3Y0 253 aa26.57■■□□□ 1.84
HOMER3-205ENST00000542541 PSTPIP2Q9H939 334 aa26.57■■□□□ 1.84
HOMER3-205ENST00000542541 TYW1BQ6NUM6 668 aa26.56■■□□□ 1.84
HOMER3-205ENST00000542541 FBXO18Q8NFZ0 1043 aa26.56■■□□□ 1.84
HOMER3-205ENST00000542541 CLEC4DQ8WXI8 215 aa26.56■■□□□ 1.84
HOMER3-205ENST00000542541 WBP1LQ9NX94 342 aa26.56■■□□□ 1.84
HOMER3-205ENST00000542541 COL11A1P12107 1806 aaPredicted RBP26.55■■□□□ 1.84
HOMER3-205ENST00000542541 TAL1P17542 331 aaPredicted RBP26.55■■□□□ 1.84
HOMER3-205ENST00000542541 ADCY7P51828 1080 aa26.55■■□□□ 1.84
HOMER3-205ENST00000542541 MUM1L1Q5H9M0 696 aa26.55■■□□□ 1.84
HOMER3-205ENST00000542541 WDR78Q5VTH9 848 aa26.55■■□□□ 1.84
HOMER3-205ENST00000542541 BICD2Q8TD16 824 aa26.55■■□□□ 1.84
HOMER3-205ENST00000542541 CUL5Q93034 780 aa26.55■■□□□ 1.84
HOMER3-205ENST00000542541 PORCNQ9H237 461 aa26.55■■□□□ 1.84
HOMER3-205ENST00000542541 RIC8AQ9NPQ8 531 aa26.55■■□□□ 1.84
HOMER3-205ENST00000542541 MAP3K20Q9NYL2 800 aaKnown RBP26.55■■□□□ 1.84
HOMER3-205ENST00000542541 H3BQV1 296 aa26.54■■□□□ 1.84
HOMER3-205ENST00000542541 NOM1Q5C9Z4 860 aaKnown RBP26.54■■□□□ 1.84
HOMER3-205ENST00000542541 IFFO2Q5TF58 517 aa26.54■■□□□ 1.84
HOMER3-205ENST00000542541 KRT40Q6A162 431 aa26.54■■□□□ 1.84
HOMER3-205ENST00000542541 PHF20Q9BVI0 1012 aa26.54■■□□□ 1.84
HOMER3-205ENST00000542541 EFCC1Q9HA90 598 aa26.54■■□□□ 1.84
HOMER3-205ENST00000542541 NFIBO00712 420 aa26.54■■□□□ 1.84
HOMER3-205ENST00000542541 STRNO43815 780 aa26.54■■□□□ 1.84
HOMER3-205ENST00000542541 SP3Q02447 781 aa26.54■■□□□ 1.84
HOMER3-205ENST00000542541 SAFBQ15424 915 aaKnown RBP eCLIP26.54■■□□□ 1.84
HOMER3-205ENST00000542541 DHX30Q7L2E3 1194 aaKnown RBP eCLIP26.54■■□□□ 1.84
HOMER3-205ENST00000542541 BRMS1Q9HCU9 246 aa26.54■■□□□ 1.84
HOMER3-205ENST00000542541 KCNJ14Q9UNX9 436 aa26.54■■□□□ 1.84
HOMER3-205ENST00000542541 IVNS1ABPQ9Y6Y0 642 aa26.54■■□□□ 1.84
HOMER3-205ENST00000542541 MYH6P13533 1939 aa26.53■■□□□ 1.84
HOMER3-205ENST00000542541 GCOM1H8Y6P7 765 aaPredicted RBP26.53■■□□□ 1.84
HOMER3-205ENST00000542541 POLR2MP0CAP2 368 aa26.53■■□□□ 1.84
HOMER3-205ENST00000542541 FCER1AP12319 257 aa26.53■■□□□ 1.84
HOMER3-205ENST00000542541 FOSBP53539 338 aa26.53■■□□□ 1.84
HOMER3-205ENST00000542541 KCTD2Q14681 263 aa26.53■■□□□ 1.84
HOMER3-205ENST00000542541 KIF22Q14807 665 aa26.53■■□□□ 1.84
HOMER3-205ENST00000542541 ANKRD35Q8N283 1001 aa26.53■■□□□ 1.84
HOMER3-205ENST00000542541 GJB4Q9NTQ9 266 aa26.53■■□□□ 1.84
HOMER3-205ENST00000542541 PCDHA4Q9UN74 947 aa26.53■■□□□ 1.84
HOMER3-205ENST00000542541 GPR25O00155 361 aa26.52■■□□□ 1.84
HOMER3-205ENST00000542541 OPLAHO14841 1288 aa26.52■■□□□ 1.84
HOMER3-205ENST00000542541 CFBP00751 764 aa26.52■■□□□ 1.84
HOMER3-205ENST00000542541 NSMFQ6X4W1 530 aa26.52■■□□□ 1.84
HOMER3-205ENST00000542541 RNF207Q6ZRF8 634 aa26.52■■□□□ 1.84
HOMER3-205ENST00000542541 PFASO15067 1338 aa26.52■■□□□ 1.84
HOMER3-205ENST00000542541 PIK3CDO00329 1044 aa26.51■■□□□ 1.83
HOMER3-205ENST00000542541 MMP1P03956 469 aa26.51■■□□□ 1.83
HOMER3-205ENST00000542541 SYT1P21579 422 aa26.51■■□□□ 1.83
HOMER3-205ENST00000542541 MCTP2Q6DN12 878 aa26.51■■□□□ 1.83
HOMER3-205ENST00000542541 PLEKHH3Q7Z736 793 aa26.51■■□□□ 1.83
HOMER3-205ENST00000542541 DAGLBQ8NCG7 672 aa26.51■■□□□ 1.83
HOMER3-205ENST00000542541 SHISA4Q96DD7 197 aa26.51■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms