RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 PPFIBP1Q86W92 1011 aa5.87□□□□□ -1.47
ATPAF1-212ENST00000542495 CNGA4Q8IV77 575 aa5.87□□□□□ -1.47
ATPAF1-212ENST00000542495 CTCFLQ8NI51 663 aaPredicted RBP5.87□□□□□ -1.47
ATPAF1-212ENST00000542495 ADAM33Q9BZ11 813 aa5.87□□□□□ -1.47
ATPAF1-212ENST00000542495 CRNKL1Q9BZJ0 848 aaKnown RBP5.87□□□□□ -1.47
ATPAF1-212ENST00000542495 SH3GLB2Q9NR46 395 aa5.87□□□□□ -1.47
ATPAF1-212ENST00000542495 ST7Q9NRC1 585 aa5.87□□□□□ -1.47
ATPAF1-212ENST00000542495 ARPP21Q9UBL0 812 aaPredicted RBP5.87□□□□□ -1.47
ATPAF1-212ENST00000542495 MKRN1Q9UHC7 482 aaKnown RBP5.87□□□□□ -1.47
ATPAF1-212ENST00000542495 NMT2O60551 498 aa5.86□□□□□ -1.47
ATPAF1-212ENST00000542495 AP1G2O75843 785 aa5.86□□□□□ -1.47
ATPAF1-212ENST00000542495 SASH3O75995 380 aa5.86□□□□□ -1.47
ATPAF1-212ENST00000542495 USP17L8P0C7I0 530 aa5.86□□□□□ -1.47
ATPAF1-212ENST00000542495 VEGFAP15692 232 aaPredicted RBP5.86□□□□□ -1.47
ATPAF1-212ENST00000542495 KLRK1P26718 216 aa5.86□□□□□ -1.47
ATPAF1-212ENST00000542495 CALML3P27482 149 aa5.86□□□□□ -1.47
ATPAF1-212ENST00000542495 CASP14P31944 242 aa5.86□□□□□ -1.47
ATPAF1-212ENST00000542495 GJA5P36382 358 aa5.86□□□□□ -1.47
ATPAF1-212ENST00000542495 TXLNAP40222 546 aa5.86□□□□□ -1.47
ATPAF1-212ENST00000542495 FXR1P51114 621 aaKnown RBP eCLIP5.86□□□□□ -1.47
ATPAF1-212ENST00000542495 COPB1P53618 953 aaKnown RBP5.86□□□□□ -1.47
ATPAF1-212ENST00000542495 TUBB4BP68371 445 aa5.86□□□□□ -1.47
ATPAF1-212ENST00000542495 TRIM14Q14142 442 aa5.86□□□□□ -1.47
ATPAF1-212ENST00000542495 KARSQ15046 597 aaKnown RBP5.86□□□□□ -1.47
ATPAF1-212ENST00000542495 EZH2Q15910 746 aaKnown RBP5.86□□□□□ -1.47
ATPAF1-212ENST00000542495 JAKMIP3Q5VZ66 844 aa5.86□□□□□ -1.47
ATPAF1-212ENST00000542495 KLHL10Q6JEL2 608 aa5.86□□□□□ -1.47
ATPAF1-212ENST00000542495 ZNF771Q7L3S4 317 aaPredicted RBP5.86□□□□□ -1.47
ATPAF1-212ENST00000542495 SRGAP1Q7Z6B7 1085 aa5.86□□□□□ -1.47
ATPAF1-212ENST00000542495 DGKHQ86XP1 1220 aa5.86□□□□□ -1.47
ATPAF1-212ENST00000542495 TMTC1Q8IUR5 882 aa5.86□□□□□ -1.47
ATPAF1-212ENST00000542495 SMYD4Q8IYR2 804 aaPredicted RBP5.86□□□□□ -1.47
ATPAF1-212ENST00000542495 FAM177A1Q8N128 213 aaPredicted RBP5.86□□□□□ -1.47
ATPAF1-212ENST00000542495 ZNF454Q8N9F8 522 aa5.86□□□□□ -1.47
ATPAF1-212ENST00000542495 DAGLBQ8NCG7 672 aa5.86□□□□□ -1.47
ATPAF1-212ENST00000542495 ADAMTS19Q8TE59 1207 aa5.86□□□□□ -1.47
ATPAF1-212ENST00000542495 KAT6BQ8WYB5 2073 aa5.86□□□□□ -1.47
ATPAF1-212ENST00000542495 GOLGA1Q92805 767 aa5.86□□□□□ -1.47
ATPAF1-212ENST00000542495 CELF1Q92879 486 aaKnown RBP5.86□□□□□ -1.47
ATPAF1-212ENST00000542495 KHSRPQ92945 711 aaKnown RBP eCLIP5.86□□□□□ -1.47
ATPAF1-212ENST00000542495 ACSBG1Q96GR2 724 aa5.86□□□□□ -1.47
ATPAF1-212ENST00000542495 ROBO3Q96MS0 1386 aa5.86□□□□□ -1.47
ATPAF1-212ENST00000542495 PARD6BQ9BYG5 372 aa5.86□□□□□ -1.47
ATPAF1-212ENST00000542495 RMND1Q9NWS8 449 aa5.86□□□□□ -1.47
ATPAF1-212ENST00000542495 CDC23Q9UJX2 597 aa5.86□□□□□ -1.47
ATPAF1-212ENST00000542495 MYH13Q9UKX3 1938 aa5.86□□□□□ -1.47
ATPAF1-212ENST00000542495 TTF2Q9UNY4 1162 aaKnown RBP5.86□□□□□ -1.47
ATPAF1-212ENST00000542495 CTNND2Q9UQB3 1225 aa5.86□□□□□ -1.47
ATPAF1-212ENST00000542495 TNS1Q9HBL0 1735 aaKnown RBP5.86□□□□□ -1.47
ATPAF1-212ENST00000542495 FAM205AQ6ZU69 1335 aa5.85□□□□□ -1.47
ATPAF1-212ENST00000542495 CNTNAP4Q9C0A0 1308 aa5.85□□□□□ -1.47
ATPAF1-212ENST00000542495 A0A0U1RQJ8 604 aa5.85□□□□□ -1.47
ATPAF1-212ENST00000542495 CCDC151A5D8V7 595 aa5.85□□□□□ -1.47
ATPAF1-212ENST00000542495 RNF225M0QZC1 329 aaPredicted RBP5.85□□□□□ -1.47
ATPAF1-212ENST00000542495 KIF5CO60282 957 aa5.85□□□□□ -1.47
ATPAF1-212ENST00000542495 TRIM37O94972 964 aa5.85□□□□□ -1.47
ATPAF1-212ENST00000542495 SEC31AO94979 1220 aaKnown RBP5.85□□□□□ -1.47
ATPAF1-212ENST00000542495 APBA3O96018 575 aa5.85□□□□□ -1.47
ATPAF1-212ENST00000542495 RPN1P04843 607 aaKnown RBP5.85□□□□□ -1.47
ATPAF1-212ENST00000542495 MYL1P05976 194 aa5.85□□□□□ -1.47
ATPAF1-212ENST00000542495 CYP2D6P10635 497 aa5.85□□□□□ -1.47
ATPAF1-212ENST00000542495 NDUFV2P19404 249 aa5.85□□□□□ -1.47
ATPAF1-212ENST00000542495 KIF5BP33176 963 aa5.85□□□□□ -1.47
ATPAF1-212ENST00000542495 CYP2C19P33261 490 aa5.85□□□□□ -1.47
ATPAF1-212ENST00000542495 ARHGAP25P42331 645 aa5.85□□□□□ -1.47
ATPAF1-212ENST00000542495 USP5P45974 858 aa5.85□□□□□ -1.47
ATPAF1-212ENST00000542495 NLRP5P59047 1200 aa5.85□□□□□ -1.47
ATPAF1-212ENST00000542495 RPS8P62241 208 aaKnown RBP5.85□□□□□ -1.47
ATPAF1-212ENST00000542495 ERVK-24P63145 666 aa5.85□□□□□ -1.47
ATPAF1-212ENST00000542495 PAK1Q13153 545 aa5.85□□□□□ -1.47
ATPAF1-212ENST00000542495 KCNB1Q14721 858 aa5.85□□□□□ -1.47
ATPAF1-212ENST00000542495 GRM4Q14833 912 aa5.85□□□□□ -1.47
ATPAF1-212ENST00000542495 R3HDM1Q15032 1099 aaKnown RBP5.85□□□□□ -1.47
ATPAF1-212ENST00000542495 BRD3Q15059 726 aa5.85□□□□□ -1.47
ATPAF1-212ENST00000542495 NAALADL2Q58DX5 795 aa5.85□□□□□ -1.47
ATPAF1-212ENST00000542495 TCP11X2Q5H9J9 407 aa5.85□□□□□ -1.47
ATPAF1-212ENST00000542495 FAM47AQ5JRC9 791 aa5.85□□□□□ -1.47
ATPAF1-212ENST00000542495 TAF3Q5VWG9 929 aa5.85□□□□□ -1.47
ATPAF1-212ENST00000542495 RRAGBQ5VZM2 374 aa5.85□□□□□ -1.47
ATPAF1-212ENST00000542495 PIK3AP1Q6ZUJ8 805 aa5.85□□□□□ -1.47
ATPAF1-212ENST00000542495 IRF2BP1Q8IU81 584 aa5.85□□□□□ -1.47
ATPAF1-212ENST00000542495 BLIDQ8IZY5 108 aa5.85□□□□□ -1.47
ATPAF1-212ENST00000542495 ADSSL1Q8N142 457 aa5.85□□□□□ -1.47
ATPAF1-212ENST00000542495 MSL3Q8N5Y2 521 aaKnown RBP5.85□□□□□ -1.47
ATPAF1-212ENST00000542495 LINC00116Q8NCU8 138 aa5.85□□□□□ -1.47
ATPAF1-212ENST00000542495 MSANTD4Q8NCY6 345 aa5.85□□□□□ -1.47
ATPAF1-212ENST00000542495 CCDC12Q8WUD4 166 aaPredicted RBP5.85□□□□□ -1.47
ATPAF1-212ENST00000542495 HNRNPLLQ8WVV9 542 aaKnown RBP5.85□□□□□ -1.47
ATPAF1-212ENST00000542495 ATRIPQ8WXE1 791 aa5.85□□□□□ -1.47
ATPAF1-212ENST00000542495 PBXIP1Q96AQ6 731 aa5.85□□□□□ -1.47
ATPAF1-212ENST00000542495 CAMKK2Q96RR4 588 aa5.85□□□□□ -1.47
ATPAF1-212ENST00000542495 FUT8Q9BYC5 575 aa5.85□□□□□ -1.47
ATPAF1-212ENST00000542495 IRX2Q9BZI1 471 aaPredicted RBP5.85□□□□□ -1.47
ATPAF1-212ENST00000542495 ANKRD2Q9GZV1 360 aa5.85□□□□□ -1.47
ATPAF1-212ENST00000542495 EPC1Q9H2F5 836 aa5.85□□□□□ -1.47
ATPAF1-212ENST00000542495 BLZF1Q9H2G9 400 aa5.85□□□□□ -1.47
ATPAF1-212ENST00000542495 PRM3Q9NNZ6 103 aa5.85□□□□□ -1.47
ATPAF1-212ENST00000542495 ABHD10Q9NUJ1 306 aa5.85□□□□□ -1.47
ATPAF1-212ENST00000542495 TCP11L1Q9NUJ3 509 aa5.85□□□□□ -1.47
ATPAF1-212ENST00000542495 MYO1AQ9UBC5 1043 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms