RNA–Protein interactions for RNA: ENST00000542310.1

VPS33A-206, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-206ENST00000542310 CLTBP09497 229 aa18.38■□□□□ 0.53
VPS33A-206ENST00000542310 TLE2Q04725 743 aa18.38■□□□□ 0.53
VPS33A-206ENST00000542310 ZNF543Q08ER8 600 aa18.38■□□□□ 0.53
VPS33A-206ENST00000542310 MUM1L1Q5H9M0 696 aa18.38■□□□□ 0.53
VPS33A-206ENST00000542310 ANKRD33Q7Z3H0 272 aa18.38■□□□□ 0.53
VPS33A-206ENST00000542310 DGKHQ86XP1 1220 aa18.38■□□□□ 0.53
VPS33A-206ENST00000542310 CHMP4CQ96CF2 233 aa18.38■□□□□ 0.53
VPS33A-206ENST00000542310 TOX2Q96NM4 488 aa18.38■□□□□ 0.53
VPS33A-206ENST00000542310 ELP1O95163 1332 aa18.38■□□□□ 0.53
VPS33A-206ENST00000542310 MROH7Q68CQ1 1323 aa18.38■□□□□ 0.53
VPS33A-206ENST00000542310 WDR19Q8NEZ3 1342 aa18.38■□□□□ 0.53
VPS33A-206ENST00000542310 C6orf222P0C671 652 aaPredicted RBP18.37■□□□□ 0.53
VPS33A-206ENST00000542310 KCNA10Q16322 511 aa18.37■□□□□ 0.53
VPS33A-206ENST00000542310 GPATCH4Q5T3I0 446 aaKnown RBP18.37■□□□□ 0.53
VPS33A-206ENST00000542310 TTBK2Q6IQ55 1244 aa18.37■□□□□ 0.53
VPS33A-206ENST00000542310 IQCA1Q86XH1 822 aa18.37■□□□□ 0.53
VPS33A-206ENST00000542310 MORC4Q8TE76 937 aa18.37■□□□□ 0.53
VPS33A-206ENST00000542310 GLT1D1Q96MS3 346 aa18.37■□□□□ 0.53
VPS33A-206ENST00000542310 ASTN1O14525 1302 aa18.37■□□□□ 0.53
VPS33A-206ENST00000542310 FRMPD2Q68DX3 1309 aaPredicted RBP18.37■□□□□ 0.53
VPS33A-206ENST00000542310 RAD50Q92878 1312 aa18.37■□□□□ 0.53
VPS33A-206ENST00000542310 TRIM43BA6NCK2 446 aa18.36■□□□□ 0.53
VPS33A-206ENST00000542310 MYADML2A6NDP7 307 aa18.36■□□□□ 0.53
VPS33A-206ENST00000542310 KIAA0355O15063 1070 aa18.36■□□□□ 0.53
VPS33A-206ENST00000542310 SLC16A2P36021 539 aa18.36■□□□□ 0.53
VPS33A-206ENST00000542310 SNAP25P60880 206 aa18.36■□□□□ 0.53
VPS33A-206ENST00000542310 IMMTQ16891 758 aaKnown RBP18.36■□□□□ 0.53
VPS33A-206ENST00000542310 TRIM43Q96BQ3 446 aaPredicted RBP18.36■□□□□ 0.53
VPS33A-206ENST00000542310 VTA1Q9NP79 307 aa18.36■□□□□ 0.53
VPS33A-206ENST00000542310 ADD3Q9UEY8 706 aaKnown RBP18.36■□□□□ 0.53
VPS33A-206ENST00000542310 CTNNA3Q9UI47 895 aa18.36■□□□□ 0.53
VPS33A-206ENST00000542310 SUPT16HQ9Y5B9 1047 aaKnown RBP18.36■□□□□ 0.53
VPS33A-206ENST00000542310 PQBP1O60828 265 aaKnown RBP18.35■□□□□ 0.53
VPS33A-206ENST00000542310 NSMFQ6X4W1 530 aa18.35■□□□□ 0.53
VPS33A-206ENST00000542310 SH3RF1Q7Z6J0 888 aa18.35■□□□□ 0.53
VPS33A-206ENST00000542310 ANKS1AQ92625 1134 aa18.35■□□□□ 0.53
VPS33A-206ENST00000542310 BADQ92934 168 aa18.35■□□□□ 0.53
VPS33A-206ENST00000542310 GPCPD1Q9NPB8 672 aa18.35■□□□□ 0.53
VPS33A-206ENST00000542310 GNEQ9Y223 722 aaKnown RBP18.35■□□□□ 0.53
VPS33A-206ENST00000542310 LAMA2P24043 3122 aaKnown RBP18.35■□□□□ 0.53
VPS33A-206ENST00000542310 A0A0U1RQG5 324 aaPredicted RBP18.34■□□□□ 0.53
VPS33A-206ENST00000542310 DCDC2CA8MYV0 355 aa18.34■□□□□ 0.53
VPS33A-206ENST00000542310 ASGR1P07306 291 aa18.34■□□□□ 0.53
VPS33A-206ENST00000542310 TNFAIP2Q03169 654 aa18.34■□□□□ 0.53
VPS33A-206ENST00000542310 TTC22Q5TAA0 569 aa18.34■□□□□ 0.53
VPS33A-206ENST00000542310 FAM109BQ6ICB4 259 aaPredicted RBP18.34■□□□□ 0.53
VPS33A-206ENST00000542310 TLK2Q86UE8 772 aa18.34■□□□□ 0.53
VPS33A-206ENST00000542310 DEFB123Q8N688 67 aa18.34■□□□□ 0.53
VPS33A-206ENST00000542310 MAF1Q9H063 256 aa18.34■□□□□ 0.53
VPS33A-206ENST00000542310 CNNM2Q9H8M5 875 aa18.34■□□□□ 0.53
VPS33A-206ENST00000542310 Q9Y3F1 56 aa18.34■□□□□ 0.53
VPS33A-206ENST00000542310 COL6A3P12111 3177 aa18.34■□□□□ 0.53
VPS33A-206ENST00000542310 NFIBO00712 420 aa18.33■□□□□ 0.52
VPS33A-206ENST00000542310 CTAGE5O15320 804 aa18.33■□□□□ 0.52
VPS33A-206ENST00000542310 KDM4AO75164 1064 aa18.33■□□□□ 0.52
VPS33A-206ENST00000542310 GSPT1P15170 499 aaKnown RBP18.33■□□□□ 0.52
VPS33A-206ENST00000542310 PDE4AP27815 886 aa18.33■□□□□ 0.52
VPS33A-206ENST00000542310 ALDH5A1P51649 535 aaPredicted RBP18.33■□□□□ 0.52
VPS33A-206ENST00000542310 GNASQ5JWF2 1037 aa18.33■□□□□ 0.52
VPS33A-206ENST00000542310 IQSEC1Q6DN90 963 aa18.33■□□□□ 0.52
VPS33A-206ENST00000542310 PNMA1Q8ND90 353 aa18.33■□□□□ 0.52
VPS33A-206ENST00000542310 KRT23Q9C075 422 aa18.33■□□□□ 0.52
VPS33A-206ENST00000542310 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.32■□□□□ 0.52
VPS33A-206ENST00000542310 B4E1Z4 1266 aa18.32■□□□□ 0.52
VPS33A-206ENST00000542310 CABYRO75952 493 aa18.32■□□□□ 0.52
VPS33A-206ENST00000542310 RAG1P15918 1043 aa18.32■□□□□ 0.52
VPS33A-206ENST00000542310 CDK7P50613 346 aa18.32■□□□□ 0.52
VPS33A-206ENST00000542310 FAAP100Q0VG06 881 aa18.32■□□□□ 0.52
VPS33A-206ENST00000542310 BAATQ14032 418 aaPredicted RBP18.32■□□□□ 0.52
VPS33A-206ENST00000542310 ASPRV1Q53RT3 343 aa18.32■□□□□ 0.52
VPS33A-206ENST00000542310 FBXO16Q8IX29 292 aaPredicted RBP18.32■□□□□ 0.52
VPS33A-206ENST00000542310 CLEC4DQ8WXI8 215 aa18.32■□□□□ 0.52
VPS33A-206ENST00000542310 ZSCAN10Q96SZ4 725 aaPredicted RBP18.32■□□□□ 0.52
VPS33A-206ENST00000542310 MPHOSPH6Q99547 160 aaKnown RBP18.32■□□□□ 0.52
VPS33A-206ENST00000542310 ZKSCAN3Q9BRR0 538 aa18.32■□□□□ 0.52
VPS33A-206ENST00000542310 SEZ6LQ9BYH1 1024 aa18.32■□□□□ 0.52
VPS33A-206ENST00000542310 KAT14Q9H8E8 782 aa18.32■□□□□ 0.52
VPS33A-206ENST00000542310 TMEM39AQ9NV64 488 aa18.32■□□□□ 0.52
VPS33A-206ENST00000542310 TBX21Q9UL17 535 aa18.32■□□□□ 0.52
VPS33A-206ENST00000542310 TNKSO95271 1327 aa18.31■□□□□ 0.52
VPS33A-206ENST00000542310 ARVCFO00192 962 aa18.31■□□□□ 0.52
VPS33A-206ENST00000542310 ZEB2O60315 1214 aa18.31■□□□□ 0.52
VPS33A-206ENST00000542310 TAPT1Q6NXT6 567 aa18.31■□□□□ 0.52
VPS33A-206ENST00000542310 SLC30A10Q6XR72 485 aa18.31■□□□□ 0.52
VPS33A-206ENST00000542310 RNF207Q6ZRF8 634 aa18.31■□□□□ 0.52
VPS33A-206ENST00000542310 ENAHQ8N8S7 591 aaPredicted RBP18.31■□□□□ 0.52
VPS33A-206ENST00000542310 PTPDC1A2A3K4 754 aa18.3■□□□□ 0.52
VPS33A-206ENST00000542310 SMPD1P17405 629 aa18.3■□□□□ 0.52
VPS33A-206ENST00000542310 ITGB8P26012 769 aa18.3■□□□□ 0.52
VPS33A-206ENST00000542310 IRX5P78411 483 aaPredicted RBP18.3■□□□□ 0.52
VPS33A-206ENST00000542310 FPGSQ05932 587 aa18.3■□□□□ 0.52
VPS33A-206ENST00000542310 SHHQ15465 462 aa18.3■□□□□ 0.52
VPS33A-206ENST00000542310 FSCN1Q16658 493 aaKnown RBP18.3■□□□□ 0.52
VPS33A-206ENST00000542310 C9orf50Q5SZB4 431 aa18.3■□□□□ 0.52
VPS33A-206ENST00000542310 NOL8Q76FK4 1167 aaKnown RBP18.3■□□□□ 0.52
VPS33A-206ENST00000542310 RGS22Q8NE09 1264 aa18.3■□□□□ 0.52
VPS33A-206ENST00000542310 DNERQ8NFT8 737 aa18.3■□□□□ 0.52
VPS33A-206ENST00000542310 RUFY2Q8WXA3 655 aa18.3■□□□□ 0.52
VPS33A-206ENST00000542310 AP5M1Q9H0R1 490 aa18.3■□□□□ 0.52
VPS33A-206ENST00000542310 IL25Q9H293 177 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms