RNA–Protein interactions for RNA: ENST00000541819.6

GABRB3-204, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 1 (best) BASIC

Gene GABRB3, Length 5,934 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-204ENST00000541819 PASKQ96RG2 1323 aa11.73□□□□□ -0.53
GABRB3-204ENST00000541819 VAMP4O75379 141 aa11.73□□□□□ -0.53
GABRB3-204ENST00000541819 VPS41P49754 854 aa11.73□□□□□ -0.53
GABRB3-204ENST00000541819 KPNA2P52292 529 aaKnown RBP11.73□□□□□ -0.53
GABRB3-204ENST00000541819 PDE1BQ01064 536 aa11.73□□□□□ -0.53
GABRB3-204ENST00000541819 TTBK2Q6IQ55 1244 aa11.73□□□□□ -0.53
GABRB3-204ENST00000541819 PRPF38AQ8NAV1 312 aaKnown RBP11.73□□□□□ -0.53
GABRB3-204ENST00000541819 SEPT8Q92599 483 aa11.73□□□□□ -0.53
GABRB3-204ENST00000541819 SNX25Q9H3E2 840 aa11.73□□□□□ -0.53
GABRB3-204ENST00000541819 EPS15L1Q9UBC2 864 aa11.73□□□□□ -0.53
GABRB3-204ENST00000541819 ARMCX3Q9UH62 379 aaPredicted RBP11.73□□□□□ -0.53
GABRB3-204ENST00000541819 DDX25Q9UHL0 483 aaKnown RBP11.73□□□□□ -0.53
GABRB3-204ENST00000541819 LMNB2Q03252 620 aa11.73□□□□□ -0.53
GABRB3-204ENST00000541819 MORC3Q14149 939 aa11.73□□□□□ -0.53
GABRB3-204ENST00000541819 TRIM68Q6AZZ1 485 aa11.73□□□□□ -0.53
GABRB3-204ENST00000541819 DPP9Q86TI2 863 aa11.73□□□□□ -0.53
GABRB3-204ENST00000541819 PGBD1Q96JS3 809 aa11.73□□□□□ -0.53
GABRB3-204ENST00000541819 EIF2AQ9BY44 585 aaKnown RBP11.73□□□□□ -0.53
GABRB3-204ENST00000541819 ZNF148Q9UQR1 794 aa11.73□□□□□ -0.53
GABRB3-204ENST00000541819 INHBAP08476 426 aa11.72□□□□□ -0.53
GABRB3-204ENST00000541819 NOP14P78316 857 aaKnown RBP11.72□□□□□ -0.53
GABRB3-204ENST00000541819 GCKRQ14397 625 aa11.72□□□□□ -0.53
GABRB3-204ENST00000541819 HP1BP3Q5SSJ5 553 aaPredicted RBP11.72□□□□□ -0.53
GABRB3-204ENST00000541819 ARHGAP27Q6ZUM4 889 aa11.72□□□□□ -0.53
GABRB3-204ENST00000541819 KBTBD3Q8NAB2 608 aa11.72□□□□□ -0.53
GABRB3-204ENST00000541819 METTL14Q9HCE5 456 aaKnown RBP11.72□□□□□ -0.53
GABRB3-204ENST00000541819 BABAM1Q9NWV8 329 aa11.72□□□□□ -0.53
GABRB3-204ENST00000541819 SERTAD1Q9UHV2 236 aa11.72□□□□□ -0.53
GABRB3-204ENST00000541819 PPP1R9AQ9ULJ8 1098 aa11.72□□□□□ -0.53
GABRB3-204ENST00000541819 COL4A3BPQ9Y5P4 624 aa11.72□□□□□ -0.53
GABRB3-204ENST00000541819 EVI5O60447 810 aa11.72□□□□□ -0.53
GABRB3-204ENST00000541819 TECP42680 631 aa11.72□□□□□ -0.53
GABRB3-204ENST00000541819 KRT33BQ14525 404 aa11.72□□□□□ -0.53
GABRB3-204ENST00000541819 KCTD2Q14681 263 aa11.72□□□□□ -0.53
GABRB3-204ENST00000541819 PLA2G4DQ86XP0 818 aa11.72□□□□□ -0.53
GABRB3-204ENST00000541819 EFCAB13Q8IY85 973 aa11.72□□□□□ -0.53
GABRB3-204ENST00000541819 TRMT44Q8IYL2 757 aaKnown RBP11.72□□□□□ -0.53
GABRB3-204ENST00000541819 DRC3Q9H069 523 aa11.72□□□□□ -0.53
GABRB3-204ENST00000541819 ARHGEF37A1IGU5 675 aa11.72□□□□□ -0.53
GABRB3-204ENST00000541819 BPIFB4P59827 614 aa11.72□□□□□ -0.53
GABRB3-204ENST00000541819 RNASELQ05823 741 aaKnown RBP11.72□□□□□ -0.53
GABRB3-204ENST00000541819 MFSD14BQ5SR56 506 aa11.72□□□□□ -0.53
GABRB3-204ENST00000541819 BLIDQ8IZY5 108 aa11.72□□□□□ -0.53
GABRB3-204ENST00000541819 PPM1KQ8N3J5 372 aa11.72□□□□□ -0.53
GABRB3-204ENST00000541819 RETREG2Q8NC44 543 aa11.72□□□□□ -0.53
GABRB3-204ENST00000541819 FLAD1Q8NFF5 587 aa11.72□□□□□ -0.53
GABRB3-204ENST00000541819 FGD4Q96M96 766 aa11.72□□□□□ -0.53
GABRB3-204ENST00000541819 SUCLA2Q9P2R7 463 aaPredicted RBP11.72□□□□□ -0.53
GABRB3-204ENST00000541819 AKT3Q9Y243 479 aa11.72□□□□□ -0.53
GABRB3-204ENST00000541819 MFAP3P55082 362 aa11.72□□□□□ -0.53
GABRB3-204ENST00000541819 FAM98CQ17RN3 349 aaKnown RBP11.72□□□□□ -0.53
GABRB3-204ENST00000541819 EXOC8Q8IYI6 725 aa11.72□□□□□ -0.53
GABRB3-204ENST00000541819 JPH2Q9BR39 696 aaPredicted RBP11.72□□□□□ -0.53
GABRB3-204ENST00000541819 PCDHA12Q9UN75 941 aa11.72□□□□□ -0.53
GABRB3-204ENST00000541819 PLB1Q6P1J6 1458 aa11.72□□□□□ -0.53
GABRB3-204ENST00000541819 APOEP02649 317 aa11.71□□□□□ -0.53
GABRB3-204ENST00000541819 PNOCQ13519 176 aa11.71□□□□□ -0.53
GABRB3-204ENST00000541819 CERKLQ49MI3 558 aaPredicted RBP11.71□□□□□ -0.53
GABRB3-204ENST00000541819 DPH5Q9H2P9 285 aa11.71□□□□□ -0.53
GABRB3-204ENST00000541819 WDR17Q8IZU2 1322 aa11.71□□□□□ -0.53
GABRB3-204ENST00000541819 NCKAP5LQ9HCH0 1330 aa11.71□□□□□ -0.53
GABRB3-204ENST00000541819 IGSF3O75054 1194 aa11.71□□□□□ -0.53
GABRB3-204ENST00000541819 MYL7Q01449 175 aa11.71□□□□□ -0.53
GABRB3-204ENST00000541819 SLC12A1Q13621 1099 aa11.71□□□□□ -0.53
GABRB3-204ENST00000541819 THOC5Q13769 683 aaKnown RBP11.71□□□□□ -0.53
GABRB3-204ENST00000541819 KIAA1841Q6NSI8 718 aa11.71□□□□□ -0.53
GABRB3-204ENST00000541819 TAB3Q8N5C8 712 aaPredicted RBP11.71□□□□□ -0.53
GABRB3-204ENST00000541819 ZSCAN10Q96SZ4 725 aaPredicted RBP11.71□□□□□ -0.53
GABRB3-204ENST00000541819 THRAP3Q9Y2W1 955 aaKnown RBP11.71□□□□□ -0.53
GABRB3-204ENST00000541819 PCDHB4Q9Y5E5 795 aa11.71□□□□□ -0.53
GABRB3-204ENST00000541819 ZAP70P43403 619 aa11.71□□□□□ -0.53
GABRB3-204ENST00000541819 GNGT1P63211 74 aa11.71□□□□□ -0.53
GABRB3-204ENST00000541819 SPATS2Q86XZ4 545 aaKnown RBP11.71□□□□□ -0.53
GABRB3-204ENST00000541819 TRIM42Q8IWZ5 723 aa11.71□□□□□ -0.53
GABRB3-204ENST00000541819 TSPYL6Q8N831 410 aa11.71□□□□□ -0.53
GABRB3-204ENST00000541819 TRIM11Q96F44 468 aa11.71□□□□□ -0.53
GABRB3-204ENST00000541819 SLC38A10Q9HBR0 1119 aa11.71□□□□□ -0.53
GABRB3-204ENST00000541819 EIF4G3O43432 1585 aaKnown RBP11.71□□□□□ -0.53
GABRB3-204ENST00000541819 SGK1O00141 431 aa11.71□□□□□ -0.54
GABRB3-204ENST00000541819 ZSCAN20P17040 1043 aaPredicted RBP11.71□□□□□ -0.54
GABRB3-204ENST00000541819 PTK2Q05397 1052 aa11.71□□□□□ -0.54
GABRB3-204ENST00000541819 STAMQ92783 540 aa11.71□□□□□ -0.54
GABRB3-204ENST00000541819 LARSQ9P2J5 1176 aaKnown RBP11.71□□□□□ -0.54
GABRB3-204ENST00000541819 hCG_1642624A0A1W2PR95 340 aa11.71□□□□□ -0.54
GABRB3-204ENST00000541819 WDR64B1ANS9 1081 aa11.71□□□□□ -0.54
GABRB3-204ENST00000541819 TTI1O43156 1089 aa11.71□□□□□ -0.54
GABRB3-204ENST00000541819 BUB1O43683 1085 aa11.71□□□□□ -0.54
GABRB3-204ENST00000541819 SLC4A1P02730 911 aa11.71□□□□□ -0.54
GABRB3-204ENST00000541819 ANXA13P27216 316 aa11.71□□□□□ -0.54
GABRB3-204ENST00000541819 SESN3P58005 492 aa11.71□□□□□ -0.54
GABRB3-204ENST00000541819 POLA2Q14181 598 aa11.71□□□□□ -0.54
GABRB3-204ENST00000541819 GALNT17Q6IS24 598 aa11.71□□□□□ -0.54
GABRB3-204ENST00000541819 SEPT9Q9UHD8 586 aaPredicted RBP11.71□□□□□ -0.54
GABRB3-204ENST00000541819 GANCQ8TET4 914 aa11.7□□□□□ -0.54
GABRB3-204ENST00000541819 STAG1Q8WVM7 1258 aa11.7□□□□□ -0.54
GABRB3-204ENST00000541819 HOXB7P09629 217 aa11.7□□□□□ -0.54
GABRB3-204ENST00000541819 OR52Z1P0C646 297 aa11.7□□□□□ -0.54
GABRB3-204ENST00000541819 NFKBIAP25963 317 aa11.7□□□□□ -0.54
GABRB3-204ENST00000541819 HSP90AA5PQ58FG0 334 aa11.7□□□□□ -0.54
GABRB3-204ENST00000541819 CCDC24Q8N4L8 307 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms