RNA–Protein interactions for RNA: ENST00000541817.5

CHFR-220, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-220ENST00000541817 EDAQ92838 391 aa11.84□□□□□ -0.51
CHFR-220ENST00000541817 DYNLL2Q96FJ2 89 aa11.84□□□□□ -0.51
CHFR-220ENST00000541817 TGS1Q96RS0 853 aaKnown RBP11.84□□□□□ -0.51
CHFR-220ENST00000541817 NUP88Q99567 741 aaPredicted RBP11.84□□□□□ -0.51
CHFR-220ENST00000541817 C17orf80Q9BSJ5 609 aa11.84□□□□□ -0.51
CHFR-220ENST00000541817 UPF3BQ9BZI7 483 aaKnown RBP11.84□□□□□ -0.51
CHFR-220ENST00000541817 AP5M1Q9H0R1 490 aa11.84□□□□□ -0.51
CHFR-220ENST00000541817 ARHGEF10LQ9HCE6 1279 aa11.84□□□□□ -0.51
CHFR-220ENST00000541817 PDGFCQ9NRA1 345 aa11.84□□□□□ -0.51
CHFR-220ENST00000541817 PPP1R9AQ9ULJ8 1098 aa11.84□□□□□ -0.51
CHFR-220ENST00000541817 GNEQ9Y223 722 aaKnown RBP11.84□□□□□ -0.51
CHFR-220ENST00000541817 TMX2Q9Y320 296 aa11.84□□□□□ -0.51
CHFR-220ENST00000541817 PTPRCP08575 1304 aa11.84□□□□□ -0.51
CHFR-220ENST00000541817 TRIP12Q14669 1992 aaPredicted RBP11.83□□□□□ -0.52
CHFR-220ENST00000541817 MED19A0JLT2 244 aaPredicted RBP11.83□□□□□ -0.52
CHFR-220ENST00000541817 LINC01553A4QN01 128 aa11.83□□□□□ -0.52
CHFR-220ENST00000541817 IDH1O75874 414 aaKnown RBP11.83□□□□□ -0.52
CHFR-220ENST00000541817 SMPD1P17405 629 aa11.83□□□□□ -0.52
CHFR-220ENST00000541817 NKX3-2P78367 333 aa11.83□□□□□ -0.52
CHFR-220ENST00000541817 ICA1Q05084 483 aa11.83□□□□□ -0.52
CHFR-220ENST00000541817 TCEAL5Q5H9L2 206 aa11.83□□□□□ -0.52
CHFR-220ENST00000541817 FAM47CQ5HY64 1035 aa11.83□□□□□ -0.52
CHFR-220ENST00000541817 TRIM67Q6ZTA4 783 aa11.83□□□□□ -0.52
CHFR-220ENST00000541817 ZNF467Q7Z7K2 595 aaPredicted RBP11.83□□□□□ -0.52
CHFR-220ENST00000541817 MAGEB6Q8N7X4 407 aa11.83□□□□□ -0.52
CHFR-220ENST00000541817 CLDND1Q9NY35 253 aa11.83□□□□□ -0.52
CHFR-220ENST00000541817 PRKAG3Q9UGI9 489 aa11.83□□□□□ -0.52
CHFR-220ENST00000541817 NAV1Q8NEY1 1877 aa11.83□□□□□ -0.52
CHFR-220ENST00000541817 SRGAP3O43295 1099 aa11.82□□□□□ -0.52
CHFR-220ENST00000541817 EEF2P13639 858 aaKnown RBP11.82□□□□□ -0.52
CHFR-220ENST00000541817 TMEM179Q6ZVK1 233 aa11.82□□□□□ -0.52
CHFR-220ENST00000541817 BMP8AQ7Z5Y6 402 aa11.82□□□□□ -0.52
CHFR-220ENST00000541817 ANKRD35Q8N283 1001 aa11.82□□□□□ -0.52
CHFR-220ENST00000541817 RETREG2Q8NC44 543 aa11.82□□□□□ -0.52
CHFR-220ENST00000541817 FBXO22Q8NEZ5 403 aa11.82□□□□□ -0.52
CHFR-220ENST00000541817 SSH1Q8WYL5 1049 aa11.82□□□□□ -0.52
CHFR-220ENST00000541817 CRBNQ96SW2 442 aa11.82□□□□□ -0.52
CHFR-220ENST00000541817 MEIS3Q99687 375 aa11.82□□□□□ -0.52
CHFR-220ENST00000541817 DBNDD2Q9BQY9 259 aa11.82□□□□□ -0.52
CHFR-220ENST00000541817 RAVER2Q9HCJ3 691 aaKnown RBP11.82□□□□□ -0.52
CHFR-220ENST00000541817 TRPC6Q9Y210 931 aa11.82□□□□□ -0.52
CHFR-220ENST00000541817 TANC1Q9C0D5 1861 aa11.81□□□□□ -0.52
CHFR-220ENST00000541817 E9PSI1 815 aa11.81□□□□□ -0.52
CHFR-220ENST00000541817 ZEB2O60315 1214 aa11.81□□□□□ -0.52
CHFR-220ENST00000541817 MYL3P08590 195 aa11.81□□□□□ -0.52
CHFR-220ENST00000541817 COPB2P35606 906 aa11.81□□□□□ -0.52
CHFR-220ENST00000541817 DLX2Q07687 328 aaPredicted RBP11.81□□□□□ -0.52
CHFR-220ENST00000541817 FBXL6Q8N531 539 aa11.81□□□□□ -0.52
CHFR-220ENST00000541817 BANK1Q8NDB2 785 aa11.81□□□□□ -0.52
CHFR-220ENST00000541817 RAD9AQ99638 391 aa11.81□□□□□ -0.52
CHFR-220ENST00000541817 PRRX2Q99811 253 aa11.81□□□□□ -0.52
CHFR-220ENST00000541817 HOMER2Q9NSB8 354 aa11.81□□□□□ -0.52
CHFR-220ENST00000541817 MCM9Q9NXL9 1143 aa11.81□□□□□ -0.52
CHFR-220ENST00000541817 PPP4R2Q9NY27 417 aa11.81□□□□□ -0.52
CHFR-220ENST00000541817 MYH8P13535 1937 aa11.81□□□□□ -0.52
CHFR-220ENST00000541817 SUPT20HL2P0C7V6 817 aa11.8□□□□□ -0.52
CHFR-220ENST00000541817 RFC2P35250 354 aa11.8□□□□□ -0.52
CHFR-220ENST00000541817 LTBRP36941 435 aa11.8□□□□□ -0.52
CHFR-220ENST00000541817 CHMP4BP1P59074 171 aa11.8□□□□□ -0.52
CHFR-220ENST00000541817 GPNMBQ14956 572 aa11.8□□□□□ -0.52
CHFR-220ENST00000541817 RPAINQ86UA6 219 aa11.8□□□□□ -0.52
CHFR-220ENST00000541817 FBXO16Q8IX29 292 aaPredicted RBP11.8□□□□□ -0.52
CHFR-220ENST00000541817 PABPC5Q96DU9 382 aaKnown RBP11.8□□□□□ -0.52
CHFR-220ENST00000541817 MRPL38Q96DV4 380 aaKnown RBP11.8□□□□□ -0.52
CHFR-220ENST00000541817 TEX13BQ9BXU2 312 aa11.8□□□□□ -0.52
CHFR-220ENST00000541817 FAM50BQ9Y247 325 aa11.8□□□□□ -0.52
CHFR-220ENST00000541817 PTPRZ1P23471 2315 aaPredicted RBP11.8□□□□□ -0.52
CHFR-220ENST00000541817 PRR23AA6NEV1 266 aa11.79□□□□□ -0.52
CHFR-220ENST00000541817 STXBP3O00186 592 aa11.79□□□□□ -0.52
CHFR-220ENST00000541817 MBTPS2O43462 519 aa11.79□□□□□ -0.52
CHFR-220ENST00000541817 BAIAP3O94812 1187 aa11.79□□□□□ -0.52
CHFR-220ENST00000541817 CSPG5O95196 566 aa11.79□□□□□ -0.52
CHFR-220ENST00000541817 GJB5O95377 273 aa11.79□□□□□ -0.52
CHFR-220ENST00000541817 MKRN4PQ13434 485 aaPredicted RBP11.79□□□□□ -0.52
CHFR-220ENST00000541817 NBPF20Q3BBV1 942 aa11.79□□□□□ -0.52
CHFR-220ENST00000541817 CCDC158Q5M9N0 1113 aa11.79□□□□□ -0.52
CHFR-220ENST00000541817 SDR42E1Q8WUS8 393 aa11.79□□□□□ -0.52
CHFR-220ENST00000541817 ANTXR1Q9H6X2 564 aa11.79□□□□□ -0.52
CHFR-220ENST00000541817 CYP2D7A0A087X1C5 515 aa11.78□□□□□ -0.52
CHFR-220ENST00000541817 KDM4AO75164 1064 aa11.78□□□□□ -0.52
CHFR-220ENST00000541817 AVPR2P30518 371 aa11.78□□□□□ -0.52
CHFR-220ENST00000541817 ZXDAP98168 799 aa11.78□□□□□ -0.52
CHFR-220ENST00000541817 SMAD2Q15796 467 aaKnown RBP11.78□□□□□ -0.52
CHFR-220ENST00000541817 TAPT1Q6NXT6 567 aa11.78□□□□□ -0.52
CHFR-220ENST00000541817 CNTNAP3BQ96NU0 1288 aa11.78□□□□□ -0.52
CHFR-220ENST00000541817 SLF1Q9BQI6 1058 aa11.78□□□□□ -0.52
CHFR-220ENST00000541817 FSD1Q9BTV5 496 aa11.78□□□□□ -0.52
CHFR-220ENST00000541817 SEZ6LQ9BYH1 1024 aa11.78□□□□□ -0.52
CHFR-220ENST00000541817 CNTNAP3Q9BZ76 1288 aa11.78□□□□□ -0.52
CHFR-220ENST00000541817 SH2D4AQ9H788 454 aa11.78□□□□□ -0.52
CHFR-220ENST00000541817 ATG2AQ2TAZ0 1938 aa11.78□□□□□ -0.52
CHFR-220ENST00000541817 PDGFBP01127 241 aaPredicted RBP11.77□□□□□ -0.53
CHFR-220ENST00000541817 GTF2F1P35269 517 aaKnown RBP eCLIP11.77□□□□□ -0.53
CHFR-220ENST00000541817 IRX6P78412 446 aaPredicted RBP11.77□□□□□ -0.53
CHFR-220ENST00000541817 G3BP1Q13283 466 aaKnown RBP eCLIP11.77□□□□□ -0.53
CHFR-220ENST00000541817 GPM6BQ13491 265 aa11.77□□□□□ -0.53
CHFR-220ENST00000541817 PTPROQ16827 1216 aa11.77□□□□□ -0.53
CHFR-220ENST00000541817 EPC2Q52LR7 807 aa11.77□□□□□ -0.53
CHFR-220ENST00000541817 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.77□□□□□ -0.53
CHFR-220ENST00000541817 KIAA1211Q6ZU35 1233 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms