RNA–Protein interactions for RNA: ENST00000541461.5

PHACTR3-209, Transcript of phosphatase and actin regulator 3, humanhuman

TSL 2 BASIC

Gene PHACTR3, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR3-209ENST00000541461 TUBBP07437 444 aa11.81□□□□□ -0.52
PHACTR3-209ENST00000541461 IVLP07476 585 aa11.81□□□□□ -0.52
PHACTR3-209ENST00000541461 GYG1P46976 350 aa11.81□□□□□ -0.52
PHACTR3-209ENST00000541461 CCDC122Q5T0U0 273 aa11.81□□□□□ -0.52
PHACTR3-209ENST00000541461 LRRC31Q6UY01 552 aa11.81□□□□□ -0.52
PHACTR3-209ENST00000541461 BRIP1Q9BX63 1249 aa11.81□□□□□ -0.52
PHACTR3-209ENST00000541461 PLEKHA4Q9H4M7 779 aa11.81□□□□□ -0.52
PHACTR3-209ENST00000541461 RMND1Q9NWS8 449 aa11.81□□□□□ -0.52
PHACTR3-209ENST00000541461 DUOX1Q9NRD9 1551 aa11.81□□□□□ -0.52
PHACTR3-209ENST00000541461 RNF40O75150 1001 aa11.81□□□□□ -0.52
PHACTR3-209ENST00000541461 CALM1P0DP23 149 aa11.81□□□□□ -0.52
PHACTR3-209ENST00000541461 CALM2P0DP24 149 aa11.81□□□□□ -0.52
PHACTR3-209ENST00000541461 CALM3P0DP25 149 aa11.81□□□□□ -0.52
PHACTR3-209ENST00000541461 IGHMBP2P38935 993 aaKnown RBP11.81□□□□□ -0.52
PHACTR3-209ENST00000541461 STAT6P42226 847 aa11.81□□□□□ -0.52
PHACTR3-209ENST00000541461 FAM47AQ5JRC9 791 aa11.81□□□□□ -0.52
PHACTR3-209ENST00000541461 ADSSL1Q8N142 457 aa11.81□□□□□ -0.52
PHACTR3-209ENST00000541461 EEF2KMTQ96G04 330 aa11.81□□□□□ -0.52
PHACTR3-209ENST00000541461 PLIN2Q99541 437 aa11.81□□□□□ -0.52
PHACTR3-209ENST00000541461 DNAJC7Q99615 494 aa11.81□□□□□ -0.52
PHACTR3-209ENST00000541461 HAUS4Q9H6D7 363 aa11.81□□□□□ -0.52
PHACTR3-209ENST00000541461 SAR1BQ9Y6B6 198 aa11.81□□□□□ -0.52
PHACTR3-209ENST00000541461 RCCD1A6NED2 376 aa11.8□□□□□ -0.52
PHACTR3-209ENST00000541461 PP2D1A8MPX8 630 aa11.8□□□□□ -0.52
PHACTR3-209ENST00000541461 LGALS16A8MUM7 142 aa11.8□□□□□ -0.52
PHACTR3-209ENST00000541461 RPS6KA5O75582 802 aa11.8□□□□□ -0.52
PHACTR3-209ENST00000541461 SCG2P13521 617 aa11.8□□□□□ -0.52
PHACTR3-209ENST00000541461 CTR9Q6PD62 1173 aa11.8□□□□□ -0.52
PHACTR3-209ENST00000541461 ANKRD18AQ8IVF6 992 aa11.8□□□□□ -0.52
PHACTR3-209ENST00000541461 C4orf32Q8N8J7 132 aa11.8□□□□□ -0.52
PHACTR3-209ENST00000541461 ZNF507Q8TCN5 953 aa11.8□□□□□ -0.52
PHACTR3-209ENST00000541461 RIN2Q8WYP3 895 aaPredicted RBP11.8□□□□□ -0.52
PHACTR3-209ENST00000541461 ACBD3Q9H3P7 528 aa11.8□□□□□ -0.52
PHACTR3-209ENST00000541461 MED4Q9NPJ6 270 aa11.8□□□□□ -0.52
PHACTR3-209ENST00000541461 CAPN11Q9UMQ6 739 aa11.8□□□□□ -0.52
PHACTR3-209ENST00000541461 USP17L12C9JPN9 530 aa11.8□□□□□ -0.52
PHACTR3-209ENST00000541461 USP17L21D6R901 530 aa11.8□□□□□ -0.52
PHACTR3-209ENST00000541461 ZNF185O15231 689 aa11.8□□□□□ -0.52
PHACTR3-209ENST00000541461 DDAH1O94760 285 aa11.8□□□□□ -0.52
PHACTR3-209ENST00000541461 POLD1P28340 1107 aa11.8□□□□□ -0.52
PHACTR3-209ENST00000541461 CHRNA5P30532 468 aa11.8□□□□□ -0.52
PHACTR3-209ENST00000541461 KLK7P49862 253 aa11.8□□□□□ -0.52
PHACTR3-209ENST00000541461 KIAA1328Q86T90 577 aa11.8□□□□□ -0.52
PHACTR3-209ENST00000541461 GSPT2Q8IYD1 628 aaKnown RBP11.8□□□□□ -0.52
PHACTR3-209ENST00000541461 CTCFLQ8NI51 663 aaPredicted RBP11.8□□□□□ -0.52
PHACTR3-209ENST00000541461 RPGRQ92834 1020 aaKnown RBP11.8□□□□□ -0.52
PHACTR3-209ENST00000541461 HINFPQ9BQA5 517 aa11.8□□□□□ -0.52
PHACTR3-209ENST00000541461 LACRTQ9GZZ8 138 aa11.8□□□□□ -0.52
PHACTR3-209ENST00000541461 AGPAT5Q9NUQ2 364 aa11.8□□□□□ -0.52
PHACTR3-209ENST00000541461 GNL3LQ9NVN8 582 aaKnown RBP11.8□□□□□ -0.52
PHACTR3-209ENST00000541461 HPCAL4Q9UM19 191 aa11.8□□□□□ -0.52
PHACTR3-209ENST00000541461 NRXN2Q9P2S2 1712 aa11.79□□□□□ -0.52
PHACTR3-209ENST00000541461 B4DLN1 442 aa11.79□□□□□ -0.52
PHACTR3-209ENST00000541461 ANKRD65E5RJM6 399 aa11.79□□□□□ -0.52
PHACTR3-209ENST00000541461 TRAPPC10P48553 1259 aa11.79□□□□□ -0.52
PHACTR3-209ENST00000541461 RPS8P62241 208 aaKnown RBP11.79□□□□□ -0.52
PHACTR3-209ENST00000541461 TSR1Q2NL82 804 aaKnown RBP11.79□□□□□ -0.52
PHACTR3-209ENST00000541461 CRY2Q49AN0 593 aa11.79□□□□□ -0.52
PHACTR3-209ENST00000541461 NAALADL2Q58DX5 795 aa11.79□□□□□ -0.52
PHACTR3-209ENST00000541461 PAPD7Q5XG87 772 aaKnown RBP11.79□□□□□ -0.52
PHACTR3-209ENST00000541461 RASGRP4Q8TDF6 673 aa11.79□□□□□ -0.52
PHACTR3-209ENST00000541461 ZNF384Q8TF68 577 aa11.79□□□□□ -0.52
PHACTR3-209ENST00000541461 JAKMIP2Q96AA8 810 aa11.79□□□□□ -0.52
PHACTR3-209ENST00000541461 PYM1Q9BRP8 204 aaKnown RBP11.79□□□□□ -0.52
PHACTR3-209ENST00000541461 DUSP10Q9Y6W6 482 aa11.79□□□□□ -0.52
PHACTR3-209ENST00000541461 KLRG2A4D1S0 409 aaPredicted RBP11.78□□□□□ -0.52
PHACTR3-209ENST00000541461 RASSF10A6NK89 507 aa11.78□□□□□ -0.52
PHACTR3-209ENST00000541461 PDE2AO00408 941 aaPredicted RBP11.78□□□□□ -0.52
PHACTR3-209ENST00000541461 PRPF6O94906 941 aaKnown RBP11.78□□□□□ -0.52
PHACTR3-209ENST00000541461 MYBL2P10244 700 aa11.78□□□□□ -0.52
PHACTR3-209ENST00000541461 PDE6BP35913 854 aa11.78□□□□□ -0.52
PHACTR3-209ENST00000541461 LONP1P36776 959 aaKnown RBP11.78□□□□□ -0.52
PHACTR3-209ENST00000541461 AARSP49588 968 aaKnown RBP eCLIP11.78□□□□□ -0.52
PHACTR3-209ENST00000541461 PFKFB3Q16875 520 aaPredicted RBP11.78□□□□□ -0.52
PHACTR3-209ENST00000541461 GPKOWQ92917 476 aaPredicted RBP eCLIP11.78□□□□□ -0.52
PHACTR3-209ENST00000541461 TRIM47Q96LD4 638 aa11.78□□□□□ -0.52
PHACTR3-209ENST00000541461 VIPAS39Q9H9C1 493 aa11.78□□□□□ -0.52
PHACTR3-209ENST00000541461 DISC1Q9NRI5 854 aa11.78□□□□□ -0.52
PHACTR3-209ENST00000541461 FAM205AQ6ZU69 1335 aa11.78□□□□□ -0.52
PHACTR3-209ENST00000541461 ZC3H4Q9UPT8 1303 aaKnown RBP11.78□□□□□ -0.52
PHACTR3-209ENST00000541461 COL1A1P02452 1464 aaPredicted RBP11.78□□□□□ -0.52
PHACTR3-209ENST00000541461 A0A1W2PQC6 194 aa11.78□□□□□ -0.52
PHACTR3-209ENST00000541461 KLRC4O43908 158 aa11.78□□□□□ -0.52
PHACTR3-209ENST00000541461 FGRP09769 529 aa11.78□□□□□ -0.52
PHACTR3-209ENST00000541461 CYP27A1Q02318 531 aa11.78□□□□□ -0.52
PHACTR3-209ENST00000541461 SKIDA1Q1XH10 827 aa11.78□□□□□ -0.52
PHACTR3-209ENST00000541461 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.78□□□□□ -0.52
PHACTR3-209ENST00000541461 RASSF8Q8NHQ8 419 aa11.78□□□□□ -0.52
PHACTR3-209ENST00000541461 AFAP1L1Q8TED9 768 aa11.78□□□□□ -0.52
PHACTR3-209ENST00000541461 PPP1R1BQ9UD71 204 aaPredicted RBP11.78□□□□□ -0.52
PHACTR3-209ENST00000541461 PDS5AQ29RF7 1337 aaKnown RBP11.78□□□□□ -0.52
PHACTR3-209ENST00000541461 DLEC1Q9Y238 1755 aa11.78□□□□□ -0.52
PHACTR3-209ENST00000541461 CACNA1SQ13698 1873 aa11.78□□□□□ -0.52
PHACTR3-209ENST00000541461 SOCS7O14512 581 aa11.77□□□□□ -0.52
PHACTR3-209ENST00000541461 EEF1GP26641 437 aaKnown RBP11.77□□□□□ -0.52
PHACTR3-209ENST00000541461 GGCXP38435 758 aa11.77□□□□□ -0.52
PHACTR3-209ENST00000541461 PTGER2P43116 358 aa11.77□□□□□ -0.52
PHACTR3-209ENST00000541461 KRT83P78385 493 aa11.77□□□□□ -0.52
PHACTR3-209ENST00000541461 STIM1Q13586 685 aa11.77□□□□□ -0.52
PHACTR3-209ENST00000541461 ARL6IP4Q66PJ3 421 aaKnown RBP11.77□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms