RNA–Protein interactions for RNA: ENST00000541295.5

LMO3-225, Transcript of LIM domain only 3, humanhuman

TSL 2 BASIC

Gene LMO3, Length 3,498 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-225ENST00000541295 DGLUCYQ7Z3D6 616 aa6.85□□□□□ -1.31
LMO3-225ENST00000541295 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.85□□□□□ -1.31
LMO3-225ENST00000541295 BPHLQ86WA6 291 aaPredicted RBP6.85□□□□□ -1.31
LMO3-225ENST00000541295 GAS2L3Q86XJ1 694 aa6.85□□□□□ -1.31
LMO3-225ENST00000541295 RAB11FIP4Q86YS3 637 aa6.85□□□□□ -1.31
LMO3-225ENST00000541295 CCDC112Q8NEF3 446 aa6.85□□□□□ -1.31
LMO3-225ENST00000541295 NR1H4Q96RI1 486 aaPredicted RBP6.85□□□□□ -1.31
LMO3-225ENST00000541295 TRIM8Q9BZR9 551 aa6.85□□□□□ -1.31
LMO3-225ENST00000541295 BRINP2Q9C0B6 783 aa6.85□□□□□ -1.31
LMO3-225ENST00000541295 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.85□□□□□ -1.31
LMO3-225ENST00000541295 TCP11L1Q9NUJ3 509 aa6.85□□□□□ -1.31
LMO3-225ENST00000541295 ATPIF1Q9UII2 106 aa6.85□□□□□ -1.31
LMO3-225ENST00000541295 TRPM3Q9HCF6 1732 aaPredicted RBP6.85□□□□□ -1.31
LMO3-225ENST00000541295 PXDNQ92626 1479 aa6.85□□□□□ -1.31
LMO3-225ENST00000541295 TSPAN1O60635 241 aa6.85□□□□□ -1.31
LMO3-225ENST00000541295 PMS2P54278 862 aa6.85□□□□□ -1.31
LMO3-225ENST00000541295 AKAP17AQ02040 695 aaKnown RBP6.85□□□□□ -1.31
LMO3-225ENST00000541295 GALNT17Q6IS24 598 aa6.85□□□□□ -1.31
LMO3-225ENST00000541295 NCCRP1Q6ZVX7 275 aaPredicted RBP6.85□□□□□ -1.31
LMO3-225ENST00000541295 TRIM58Q8NG06 486 aa6.85□□□□□ -1.31
LMO3-225ENST00000541295 EIF2AQ9BY44 585 aaKnown RBP6.85□□□□□ -1.31
LMO3-225ENST00000541295 VRTNQ9H8Y1 702 aa6.85□□□□□ -1.31
LMO3-225ENST00000541295 CUEDC1Q9NWM3 386 aaPredicted RBP6.85□□□□□ -1.31
LMO3-225ENST00000541295 PPP2R3BQ9Y5P8 575 aa6.85□□□□□ -1.31
LMO3-225ENST00000541295 MED1Q15648 1581 aaPredicted RBP6.85□□□□□ -1.31
LMO3-225ENST00000541295 SLIT3O75094 1523 aa6.85□□□□□ -1.31
LMO3-225ENST00000541295 BPNT1O95861 308 aa6.85□□□□□ -1.31
LMO3-225ENST00000541295 LDHBP07195 334 aaKnown RBP6.85□□□□□ -1.31
LMO3-225ENST00000541295 ATP6V1E1P36543 226 aa6.85□□□□□ -1.31
LMO3-225ENST00000541295 PLA2G4AP47712 749 aa6.85□□□□□ -1.31
LMO3-225ENST00000541295 DR1Q01658 176 aa6.85□□□□□ -1.31
LMO3-225ENST00000541295 ANKRD1Q15327 319 aa6.85□□□□□ -1.31
LMO3-225ENST00000541295 BBS9Q3SYG4 887 aa6.85□□□□□ -1.31
LMO3-225ENST00000541295 SLFNL1Q499Z3 407 aa6.85□□□□□ -1.31
LMO3-225ENST00000541295 AKAP4Q5JQC9 854 aa6.85□□□□□ -1.31
LMO3-225ENST00000541295 TTC39AQ5SRH9 613 aa6.85□□□□□ -1.31
LMO3-225ENST00000541295 PDXDC2PQ6P474 469 aa6.85□□□□□ -1.31
LMO3-225ENST00000541295 BICDL1Q6ZP65 573 aa6.85□□□□□ -1.31
LMO3-225ENST00000541295 CATSPER4Q7RTX7 472 aa6.85□□□□□ -1.31
LMO3-225ENST00000541295 FERMT3Q86UX7 667 aa6.85□□□□□ -1.31
LMO3-225ENST00000541295 FAM9CQ8IZT9 166 aa6.85□□□□□ -1.31
LMO3-225ENST00000541295 NFATC2IPQ8NCF5 419 aa6.85□□□□□ -1.31
LMO3-225ENST00000541295 C1orf74Q96LT6 269 aa6.85□□□□□ -1.31
LMO3-225ENST00000541295 OSBPL5Q9H0X9 879 aaPredicted RBP6.85□□□□□ -1.31
LMO3-225ENST00000541295 DNAJC25Q9H1X3 360 aa6.85□□□□□ -1.31
LMO3-225ENST00000541295 PAPOLBQ9NRJ5 636 aaKnown RBP6.85□□□□□ -1.31
LMO3-225ENST00000541295 RGPD5Q99666 1765 aa6.84□□□□□ -1.31
LMO3-225ENST00000541295 NMT2O60551 498 aa6.84□□□□□ -1.31
LMO3-225ENST00000541295 KLHL41O60662 606 aa6.84□□□□□ -1.31
LMO3-225ENST00000541295 KPNA6O60684 536 aa6.84□□□□□ -1.31
LMO3-225ENST00000541295 CDC27P30260 824 aa6.84□□□□□ -1.31
LMO3-225ENST00000541295 MARSP56192 900 aaKnown RBP6.84□□□□□ -1.31
LMO3-225ENST00000541295 TNIP1Q15025 636 aa6.84□□□□□ -1.31
LMO3-225ENST00000541295 SPATA1Q5VX52 437 aa6.84□□□□□ -1.31
LMO3-225ENST00000541295 HVCN1Q96D96 273 aa6.84□□□□□ -1.31
LMO3-225ENST00000541295 CEP295NLQ96MC4 621 aa6.84□□□□□ -1.31
LMO3-225ENST00000541295 AP1M1Q9BXS5 423 aa6.84□□□□□ -1.31
LMO3-225ENST00000541295 PCDH18Q9HCL0 1135 aa6.84□□□□□ -1.31
LMO3-225ENST00000541295 ZBTB40Q9NUA8 1239 aa6.84□□□□□ -1.31
LMO3-225ENST00000541295 TUBGCP4Q9UGJ1 667 aa6.84□□□□□ -1.31
LMO3-225ENST00000541295 MRPS23Q9Y3D9 190 aaKnown RBP6.84□□□□□ -1.31
LMO3-225ENST00000541295 A0A0G2JS52 829 aa6.84□□□□□ -1.31
LMO3-225ENST00000541295 FAM170AA1A519 330 aa6.84□□□□□ -1.31
LMO3-225ENST00000541295 TTC34A8MYJ7 566 aa6.84□□□□□ -1.31
LMO3-225ENST00000541295 RNMTO43148 476 aaKnown RBP6.84□□□□□ -1.31
LMO3-225ENST00000541295 PAHP00439 452 aa6.84□□□□□ -1.31
LMO3-225ENST00000541295 RCAN1P53805 252 aa6.84□□□□□ -1.31
LMO3-225ENST00000541295 SLC39A6Q13433 755 aa6.84□□□□□ -1.31
LMO3-225ENST00000541295 PROSER3Q2NL68 480 aa6.84□□□□□ -1.31
LMO3-225ENST00000541295 GRAMD1BQ3KR37 738 aa6.84□□□□□ -1.31
LMO3-225ENST00000541295 PPP1R21Q6ZMI0 780 aa6.84□□□□□ -1.31
LMO3-225ENST00000541295 GORASP1Q9BQQ3 440 aa6.84□□□□□ -1.31
LMO3-225ENST00000541295 PARVGQ9HBI0 331 aa6.84□□□□□ -1.31
LMO3-225ENST00000541295 FKBP14Q9NWM8 211 aa6.84□□□□□ -1.31
LMO3-225ENST00000541295 NCOA3Q9Y6Q9 1424 aa6.84□□□□□ -1.31
LMO3-225ENST00000541295 TEX28O15482 410 aa6.84□□□□□ -1.32
LMO3-225ENST00000541295 CYTH3O43739 400 aa6.84□□□□□ -1.32
LMO3-225ENST00000541295 ZNF254O75437 659 aa6.84□□□□□ -1.32
LMO3-225ENST00000541295 RECKO95980 971 aa6.84□□□□□ -1.32
LMO3-225ENST00000541295 PCP11498 1178 aaKnown RBP6.84□□□□□ -1.32
LMO3-225ENST00000541295 CCT6AP40227 531 aaKnown RBP6.84□□□□□ -1.32
LMO3-225ENST00000541295 PIP4K2BP78356 416 aa6.84□□□□□ -1.32
LMO3-225ENST00000541295 DDR1Q08345 913 aa6.84□□□□□ -1.32
LMO3-225ENST00000541295 ADALQ6DHV7 355 aa6.84□□□□□ -1.32
LMO3-225ENST00000541295 NEK5Q6P3R8 708 aa6.84□□□□□ -1.32
LMO3-225ENST00000541295 ESX1Q8N693 406 aa6.84□□□□□ -1.32
LMO3-225ENST00000541295 PBXIP1Q96AQ6 731 aa6.84□□□□□ -1.32
LMO3-225ENST00000541295 C16orf45Q96MC5 204 aaPredicted RBP6.84□□□□□ -1.32
LMO3-225ENST00000541295 CHST12Q9NRB3 414 aa6.84□□□□□ -1.32
LMO3-225ENST00000541295 ABCC4O15439 1325 aa6.84□□□□□ -1.32
LMO3-225ENST00000541295 USP54Q70EL1 1684 aa6.83□□□□□ -1.32
LMO3-225ENST00000541295 BHMG1C9JSJ3 638 aaPredicted RBP6.83□□□□□ -1.32
LMO3-225ENST00000541295 NDC80O14777 642 aa6.83□□□□□ -1.32
LMO3-225ENST00000541295 CASQ2O14958 399 aaPredicted RBP6.83□□□□□ -1.32
LMO3-225ENST00000541295 INMTO95050 263 aa6.83□□□□□ -1.32
LMO3-225ENST00000541295 PDGFRBP09619 1106 aa6.83□□□□□ -1.32
LMO3-225ENST00000541295 BCRP11274 1271 aa6.83□□□□□ -1.32
LMO3-225ENST00000541295 SCG2P13521 617 aa6.83□□□□□ -1.32
LMO3-225ENST00000541295 SLC16A2P36021 539 aa6.83□□□□□ -1.32
LMO3-225ENST00000541295 CETN2P41208 172 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms