RNA–Protein interactions for RNA: ENST00000541171.1

LEMD3-203, Transcript of LEM domain containing 3, humanhuman

TSL 2

Gene LEMD3, Length 856 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-203ENST00000541171 FAM227BQ96M60 508 aa28.36■■■□□ 2.13
LEMD3-203ENST00000541171 BUD13Q9BRD0 619 aaKnown RBP eCLIP28.36■■■□□ 2.131e-6■□□□□ 8.2
LEMD3-203ENST00000541171 HELLSQ9NRZ9 838 aa28.36■■■□□ 2.13
LEMD3-203ENST00000541171 TLR3O15455 904 aaKnown RBP28.35■■■□□ 2.13
LEMD3-203ENST00000541171 ORC4O43929 436 aa28.35■■■□□ 2.13
LEMD3-203ENST00000541171 PTGS1P23219 599 aa28.35■■■□□ 2.13
LEMD3-203ENST00000541171 SLC16A2P36021 539 aa28.35■■■□□ 2.13
LEMD3-203ENST00000541171 PDE1AP54750 535 aa28.35■■■□□ 2.13
LEMD3-203ENST00000541171 TTBK2Q6IQ55 1244 aa28.35■■■□□ 2.13
LEMD3-203ENST00000541171 COL25A1Q9BXS0 654 aaPredicted RBP28.35■■■□□ 2.13
LEMD3-203ENST00000541171 PPP1R12CQ9BZL4 782 aa28.35■■■□□ 2.13
LEMD3-203ENST00000541171 CYP39A1Q9NYL5 469 aa28.35■■■□□ 2.13
LEMD3-203ENST00000541171 ASTN1O14525 1302 aa28.35■■■□□ 2.13
LEMD3-203ENST00000541171 HSFX4A0A1B0GTS1 333 aaPredicted RBP28.34■■■□□ 2.13
LEMD3-203ENST00000541171 HSFX3A0A1B0GWH4 333 aaPredicted RBP28.34■■■□□ 2.13
LEMD3-203ENST00000541171 DYNC1LI2O43237 492 aaPredicted RBP28.34■■■□□ 2.13
LEMD3-203ENST00000541171 ALX1Q15699 326 aa28.34■■■□□ 2.13
LEMD3-203ENST00000541171 CXCL17Q6UXB2 119 aa28.34■■■□□ 2.13
LEMD3-203ENST00000541171 TLK2Q86UE8 772 aa28.34■■■□□ 2.13
LEMD3-203ENST00000541171 DCAF4Q8WV16 495 aa28.34■■■□□ 2.13
LEMD3-203ENST00000541171 PURBQ96QR8 312 aaKnown RBP28.34■■■□□ 2.13
LEMD3-203ENST00000541171 AP5M1Q9H0R1 490 aa28.34■■■□□ 2.13
LEMD3-203ENST00000541171 PDGFCQ9NRA1 345 aa28.34■■■□□ 2.13
LEMD3-203ENST00000541171 FOSL2P15408 326 aa28.33■■■□□ 2.13
LEMD3-203ENST00000541171 SMPD1P17405 629 aa28.33■■■□□ 2.13
LEMD3-203ENST00000541171 PPIGQ13427 754 aaKnown RBP eCLIP28.33■■■□□ 2.135e-8■□□□□ 9.7
LEMD3-203ENST00000541171 FBXO16Q8IX29 292 aaPredicted RBP28.33■■■□□ 2.13
LEMD3-203ENST00000541171 FAM126BQ8IXS8 530 aa28.33■■■□□ 2.13
LEMD3-203ENST00000541171 GNEQ9Y223 722 aaKnown RBP28.33■■■□□ 2.13
LEMD3-203ENST00000541171 A0A0D9SFI3 127 aa28.32■■■□□ 2.12
LEMD3-203ENST00000541171 FGAP02671 866 aa28.32■■■□□ 2.12
LEMD3-203ENST00000541171 CSF2RAP15509 400 aa28.32■■■□□ 2.12
LEMD3-203ENST00000541171 NOVP48745 357 aa28.32■■■□□ 2.12
LEMD3-203ENST00000541171 MCMDC2Q4G0Z9 681 aa28.32■■■□□ 2.12
LEMD3-203ENST00000541171 C16orf59Q7L2K0 433 aa28.32■■■□□ 2.12
LEMD3-203ENST00000541171 TMEM199Q8N511 208 aa28.32■■■□□ 2.12
LEMD3-203ENST00000541171 GPCPD1Q9NPB8 672 aa28.32■■■□□ 2.12
LEMD3-203ENST00000541171 FRMPD2Q68DX3 1309 aaPredicted RBP28.32■■■□□ 2.12
LEMD3-203ENST00000541171 UNC80Q8N2C7 3258 aa28.31■■■□□ 2.12
LEMD3-203ENST00000541171 ICAM1P05362 532 aa28.31■■■□□ 2.12
LEMD3-203ENST00000541171 ACRP10323 421 aa28.31■■■□□ 2.12
LEMD3-203ENST00000541171 DNAJB2P25686 324 aa28.31■■■□□ 2.12
LEMD3-203ENST00000541171 NKX3-2P78367 333 aa28.31■■■□□ 2.12
LEMD3-203ENST00000541171 FSCN1Q16658 493 aaKnown RBP28.31■■■□□ 2.12
LEMD3-203ENST00000541171 TMEM47Q9BQJ4 181 aa28.31■■■□□ 2.12
LEMD3-203ENST00000541171 TMEM265A0A087WTH1 108 aa28.3■■■□□ 2.12
LEMD3-203ENST00000541171 FGRP09769 529 aa28.3■■■□□ 2.12
LEMD3-203ENST00000541171 HAND2P61296 217 aa28.3■■■□□ 2.12
LEMD3-203ENST00000541171 TMEM240Q5SV17 173 aa28.3■■■□□ 2.12
LEMD3-203ENST00000541171 TMEM63BQ5T3F8 832 aa28.3■■■□□ 2.12
LEMD3-203ENST00000541171 SYDE2Q5VT97 1194 aa28.3■■■□□ 2.12
LEMD3-203ENST00000541171 IQSEC1Q6DN90 963 aa28.3■■■□□ 2.12
LEMD3-203ENST00000541171 TAPT1Q6NXT6 567 aa28.3■■■□□ 2.12
LEMD3-203ENST00000541171 RANBP17Q9H2T7 1088 aaKnown RBP28.3■■■□□ 2.12
LEMD3-203ENST00000541171 TRIM6-TRIM34B2RNG4 842 aa28.29■■■□□ 2.12
LEMD3-203ENST00000541171 ZEB2O60315 1214 aa28.29■■■□□ 2.12
LEMD3-203ENST00000541171 TOP1P11387 765 aaKnown RBP28.29■■■□□ 2.12
LEMD3-203ENST00000541171 CYP2C18P33260 490 aa28.29■■■□□ 2.12
LEMD3-203ENST00000541171 NMIQ13287 307 aaPredicted RBP28.29■■■□□ 2.12
LEMD3-203ENST00000541171 BAATQ14032 418 aaPredicted RBP28.29■■■□□ 2.12
LEMD3-203ENST00000541171 GRIN2CQ14957 1233 aa28.29■■■□□ 2.12
LEMD3-203ENST00000541171 KIAA1211Q6ZU35 1233 aa28.29■■■□□ 2.12
LEMD3-203ENST00000541171 CABYRO75952 493 aa28.28■■■□□ 2.12
LEMD3-203ENST00000541171 CD4P01730 458 aa28.28■■■□□ 2.12
LEMD3-203ENST00000541171 HSPD1P10809 573 aaKnown RBP28.28■■■□□ 2.12
LEMD3-203ENST00000541171 HDAC1Q13547 482 aaPredicted RBP28.28■■■□□ 2.12
LEMD3-203ENST00000541171 ITGA7Q13683 1181 aa28.28■■■□□ 2.12
LEMD3-203ENST00000541171 BTNL9Q6UXG8 535 aa28.28■■■□□ 2.12
LEMD3-203ENST00000541171 ZNF365Q70YC5 407 aa28.28■■■□□ 2.12
LEMD3-203ENST00000541171 ZNF589Q86UQ0 364 aaPredicted RBP28.28■■■□□ 2.12
LEMD3-203ENST00000541171 GRXCR1A8MXD5 290 aa28.27■■■□□ 2.12
LEMD3-203ENST00000541171 RILPL2Q969X0 211 aa28.27■■■□□ 2.12
LEMD3-203ENST00000541171 TIFAQ96CG3 184 aa28.27■■■□□ 2.12
LEMD3-203ENST00000541171 LNPKQ9C0E8 428 aa28.27■■■□□ 2.12
LEMD3-203ENST00000541171 VTA1Q9NP79 307 aa28.27■■■□□ 2.12
LEMD3-203ENST00000541171 PTPDC1A2A3K4 754 aa28.26■■■□□ 2.11
LEMD3-203ENST00000541171 NFIBO00712 420 aa28.26■■■□□ 2.11
LEMD3-203ENST00000541171 PSMC6P62333 389 aa28.26■■■□□ 2.11
LEMD3-203ENST00000541171 SLC43A3Q8NBI5 491 aa28.26■■■□□ 2.11
LEMD3-203ENST00000541171 ZNF576Q9H609 170 aa28.26■■■□□ 2.11
LEMD3-203ENST00000541171 TCP11L1Q9NUJ3 509 aa28.26■■■□□ 2.11
LEMD3-203ENST00000541171 GRIN2DO15399 1336 aa28.25■■■□□ 2.11
LEMD3-203ENST00000541171 PSRC1Q6PGN9 363 aaPredicted RBP28.25■■■□□ 2.11
LEMD3-203ENST00000541171 TRPV6Q9H1D0 765 aa28.25■■■□□ 2.11
LEMD3-203ENST00000541171 HIPK3Q9H422 1215 aa28.25■■■□□ 2.11
LEMD3-203ENST00000541171 ADD3Q9UEY8 706 aaKnown RBP28.25■■■□□ 2.11
LEMD3-203ENST00000541171 Q9Y3F1 56 aa28.25■■■□□ 2.11
LEMD3-203ENST00000541171 UMODL1Q5DID0 1318 aa28.24■■■□□ 2.11
LEMD3-203ENST00000541171 CALML3P27482 149 aa28.24■■■□□ 2.11
LEMD3-203ENST00000541171 PBX2P40425 430 aa28.24■■■□□ 2.11
LEMD3-203ENST00000541171 ALDH5A1P51649 535 aaPredicted RBP28.24■■■□□ 2.11
LEMD3-203ENST00000541171 B4GALNT3Q6L9W6 998 aa28.24■■■□□ 2.11
LEMD3-203ENST00000541171 MFSD6Q6ZSS7 791 aa28.24■■■□□ 2.11
LEMD3-203ENST00000541171 MORC4Q8TE76 937 aa28.24■■■□□ 2.11
LEMD3-203ENST00000541171 IL23AQ9NPF7 189 aa28.24■■■□□ 2.11
LEMD3-203ENST00000541171 CCDC171Q6TFL3 1326 aa28.23■■■□□ 2.11
LEMD3-203ENST00000541171 PDHBP11177 359 aa28.23■■■□□ 2.11
LEMD3-203ENST00000541171 CCL23P55773 120 aa28.23■■■□□ 2.11
LEMD3-203ENST00000541171 AKNAD1Q5T1N1 836 aa28.23■■■□□ 2.11
LEMD3-203ENST00000541171 PBX4Q9BYU1 374 aa28.23■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms