RNA–Protein interactions for RNA: ENST00000541110.5

TRERF1-205, Transcript of transcriptional regulating factor 1, humanhuman

TSL 1 (best) BASIC

Gene TRERF1, Length 7,646 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-205ENST00000541110 CCDC38Q502W7 563 aa10.93□□□□□ -0.66
TRERF1-205ENST00000541110 FAM178BQ8IXR5 827 aa10.93□□□□□ -0.66
TRERF1-205ENST00000541110 PPM1KQ8N3J5 372 aa10.93□□□□□ -0.66
TRERF1-205ENST00000541110 SPATA5Q8NB90 893 aa10.93□□□□□ -0.66
TRERF1-205ENST00000541110 PCDHA12Q9UN75 941 aa10.93□□□□□ -0.66
TRERF1-205ENST00000541110 INPP5FQ9Y2H2 1132 aa10.93□□□□□ -0.66
TRERF1-205ENST00000541110 CLNS1AP54105 237 aaKnown RBP10.93□□□□□ -0.66
TRERF1-205ENST00000541110 EVCP57679 992 aa10.93□□□□□ -0.66
TRERF1-205ENST00000541110 BFSP1Q12934 665 aa10.93□□□□□ -0.66
TRERF1-205ENST00000541110 PDCD6IPQ8WUM4 868 aaKnown RBP10.93□□□□□ -0.66
TRERF1-205ENST00000541110 ZNF215Q9UL58 517 aaPredicted RBP10.93□□□□□ -0.66
TRERF1-205ENST00000541110 ACTN1P12814 892 aa10.93□□□□□ -0.66
TRERF1-205ENST00000541110 NSUN2Q08J23 767 aaKnown RBP eCLIP10.93□□□□□ -0.66
TRERF1-205ENST00000541110 FBXL13Q8NEE6 735 aa10.93□□□□□ -0.66
TRERF1-205ENST00000541110 TACO1Q9BSH4 297 aaKnown RBP10.93□□□□□ -0.66
TRERF1-205ENST00000541110 TAB2Q9NYJ8 693 aa10.93□□□□□ -0.66
TRERF1-205ENST00000541110 TPCN1Q9ULQ1 816 aa10.93□□□□□ -0.66
TRERF1-205ENST00000541110 GUCY2FP51841 1108 aa10.93□□□□□ -0.66
TRERF1-205ENST00000541110 YWHAHQ04917 246 aaPredicted RBP10.93□□□□□ -0.66
TRERF1-205ENST00000541110 RWDD4Q6NW29 188 aaKnown RBP10.93□□□□□ -0.66
TRERF1-205ENST00000541110 FBXO11Q86XK2 927 aa10.93□□□□□ -0.66
TRERF1-205ENST00000541110 SLC17A8Q8NDX2 589 aa10.93□□□□□ -0.66
TRERF1-205ENST00000541110 NT5C3AQ9H0P0 336 aa10.93□□□□□ -0.66
TRERF1-205ENST00000541110 Q9H521 79 aa10.93□□□□□ -0.66
TRERF1-205ENST00000541110 IFT122Q9HBG6 1241 aa10.93□□□□□ -0.66
TRERF1-205ENST00000541110 ANGEL1Q9UNK9 670 aaKnown RBP10.93□□□□□ -0.66
TRERF1-205ENST00000541110 WDR97A6NE52 1622 aa10.93□□□□□ -0.66
TRERF1-205ENST00000541110 RNMTO43148 476 aaKnown RBP10.93□□□□□ -0.66
TRERF1-205ENST00000541110 CIITAP33076 1130 aa10.93□□□□□ -0.66
TRERF1-205ENST00000541110 STX1BP61266 288 aa10.93□□□□□ -0.66
TRERF1-205ENST00000541110 ASPHQ12797 758 aa10.93□□□□□ -0.66
TRERF1-205ENST00000541110 CDV3Q9UKY7 258 aaKnown RBP10.93□□□□□ -0.66
TRERF1-205ENST00000541110 RAP1GDS1P52306 607 aa10.93□□□□□ -0.66
TRERF1-205ENST00000541110 VPS54Q9P1Q0 977 aa10.93□□□□□ -0.66
TRERF1-205ENST00000541110 DENND4BO75064 1496 aaPredicted RBP10.92□□□□□ -0.66
TRERF1-205ENST00000541110 GOLGA8QA0A0J9YX86 632 aa10.92□□□□□ -0.66
TRERF1-205ENST00000541110 GOLGA8OA6NCC3 632 aa10.92□□□□□ -0.66
TRERF1-205ENST00000541110 GOLGA8NF8WBI6 632 aa10.92□□□□□ -0.66
TRERF1-205ENST00000541110 FAM186BQ8IYM0 893 aa10.92□□□□□ -0.66
TRERF1-205ENST00000541110 PGBD3Q8N328 593 aa10.92□□□□□ -0.66
TRERF1-205ENST00000541110 CACTINQ8WUQ7 758 aaKnown RBP10.92□□□□□ -0.66
TRERF1-205ENST00000541110 CCDC138Q96M89 665 aa10.92□□□□□ -0.66
TRERF1-205ENST00000541110 CCND2P30279 289 aa10.92□□□□□ -0.66
TRERF1-205ENST00000541110 ACCSLQ4AC99 568 aa10.92□□□□□ -0.66
TRERF1-205ENST00000541110 SMC5Q8IY18 1101 aa10.92□□□□□ -0.66
TRERF1-205ENST00000541110 SPICE1Q8N0Z3 855 aa10.92□□□□□ -0.66
TRERF1-205ENST00000541110 TEKT4Q8WW24 435 aa10.92□□□□□ -0.66
TRERF1-205ENST00000541110 IBTKQ9P2D0 1353 aaPredicted RBP10.92□□□□□ -0.66
TRERF1-205ENST00000541110 YTHDC2Q9H6S0 1430 aaKnown RBP10.92□□□□□ -0.66
TRERF1-205ENST00000541110 EFCAB5A4FU69 1503 aa10.92□□□□□ -0.66
TRERF1-205ENST00000541110 TRAPPC10P48553 1259 aa10.92□□□□□ -0.66
TRERF1-205ENST00000541110 EXOC8Q8IYI6 725 aa10.92□□□□□ -0.66
TRERF1-205ENST00000541110 EXT2Q93063 718 aa10.92□□□□□ -0.66
TRERF1-205ENST00000541110 SLC10A4Q96EP9 437 aa10.92□□□□□ -0.66
TRERF1-205ENST00000541110 CEP19Q96LK0 163 aa10.92□□□□□ -0.66
TRERF1-205ENST00000541110 C19orf44Q9H6X5 657 aa10.92□□□□□ -0.66
TRERF1-205ENST00000541110 LRRC4Q9HBW1 653 aa10.92□□□□□ -0.66
TRERF1-205ENST00000541110 OSTNP61366 133 aa10.92□□□□□ -0.66
TRERF1-205ENST00000541110 PDE1BQ01064 536 aa10.92□□□□□ -0.66
TRERF1-205ENST00000541110 GOLGA8FQ08AF8 430 aa10.92□□□□□ -0.66
TRERF1-205ENST00000541110 GOLGA8DPQ0D2H9 430 aa10.92□□□□□ -0.66
TRERF1-205ENST00000541110 SUPT20HL1Q3ZLR7 823 aa10.92□□□□□ -0.66
TRERF1-205ENST00000541110 NESP48681 1621 aa10.92□□□□□ -0.66
TRERF1-205ENST00000541110 H0YCG3 227 aa10.92□□□□□ -0.66
TRERF1-205ENST00000541110 INHBAP08476 426 aa10.92□□□□□ -0.66
TRERF1-205ENST00000541110 STAMQ92783 540 aa10.92□□□□□ -0.66
TRERF1-205ENST00000541110 DNAJC7Q99615 494 aa10.92□□□□□ -0.66
TRERF1-205ENST00000541110 ABCC1P33527 1531 aa10.92□□□□□ -0.66
TRERF1-205ENST00000541110 KCNK3O14649 394 aa10.92□□□□□ -0.66
TRERF1-205ENST00000541110 KCNA1Q09470 495 aa10.92□□□□□ -0.66
TRERF1-205ENST00000541110 CAPRIN1Q14444 709 aaKnown RBP10.92□□□□□ -0.66
TRERF1-205ENST00000541110 CROCCP2Q86T23 111 aa10.92□□□□□ -0.66
TRERF1-205ENST00000541110 NCOA5Q9HCD5 579 aaKnown RBP10.92□□□□□ -0.66
TRERF1-205ENST00000541110 DOLKQ9UPQ8 538 aa10.92□□□□□ -0.66
TRERF1-205ENST00000541110 ZNF148Q9UQR1 794 aa10.92□□□□□ -0.66
TRERF1-205ENST00000541110 MROH5Q6ZUA9 1318 aa10.91□□□□□ -0.66
TRERF1-205ENST00000541110 TAF11Q15544 211 aa10.91□□□□□ -0.66
TRERF1-205ENST00000541110 DSTYKQ6XUX3 929 aa10.91□□□□□ -0.66
TRERF1-205ENST00000541110 HPCAL4Q9UM19 191 aa10.91□□□□□ -0.66
TRERF1-205ENST00000541110 WDR17Q8IZU2 1322 aa10.91□□□□□ -0.66
TRERF1-205ENST00000541110 ATF2P15336 505 aa10.91□□□□□ -0.66
TRERF1-205ENST00000541110 YWHAGP61981 247 aaKnown RBP eCLIP10.91□□□□□ -0.66
TRERF1-205ENST00000541110 ANO1Q5XXA6 986 aa10.91□□□□□ -0.66
TRERF1-205ENST00000541110 KRT26Q7Z3Y9 468 aa10.91□□□□□ -0.66
TRERF1-205ENST00000541110 PLA2G4DQ86XP0 818 aa10.91□□□□□ -0.66
TRERF1-205ENST00000541110 TYW1Q9NV66 732 aaKnown RBP10.91□□□□□ -0.66
TRERF1-205ENST00000541110 TSR3Q9UJK0 312 aaKnown RBP10.91□□□□□ -0.66
TRERF1-205ENST00000541110 ZNF532Q9HCE3 1301 aa10.91□□□□□ -0.66
TRERF1-205ENST00000541110 POC1B-GALNT4F8VUJ3 575 aa10.91□□□□□ -0.66
TRERF1-205ENST00000541110 KRIT1O00522 736 aa10.91□□□□□ -0.66
TRERF1-205ENST00000541110 PPARGP37231 505 aaPredicted RBP10.91□□□□□ -0.66
TRERF1-205ENST00000541110 MTMR3Q13615 1198 aa10.91□□□□□ -0.66
TRERF1-205ENST00000541110 GLE1Q53GS7 698 aaKnown RBP10.91□□□□□ -0.66
TRERF1-205ENST00000541110 OTULINQ96BN8 352 aa10.91□□□□□ -0.66
TRERF1-205ENST00000541110 KCNJ14Q9UNX9 436 aa10.91□□□□□ -0.66
TRERF1-205ENST00000541110 ATF5Q9Y2D1 282 aaPredicted RBP10.91□□□□□ -0.66
TRERF1-205ENST00000541110 NCAPD3P42695 1498 aa10.91□□□□□ -0.66
TRERF1-205ENST00000541110 ARHGAP6O43182 974 aa10.91□□□□□ -0.66
TRERF1-205ENST00000541110 RNF40O75150 1001 aa10.91□□□□□ -0.66
TRERF1-205ENST00000541110 DNAJC8O75937 253 aaPredicted RBP10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms