RNA–Protein interactions for RNA: ENST00000540904.1

SNHG1-215, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-215ENST00000540904 WDR19Q8NEZ3 1342 aa10.75□□□□□ -0.69
SNHG1-215ENST00000540904 NFIBO00712 420 aa10.74□□□□□ -0.69
SNHG1-215ENST00000540904 DDAH1O94760 285 aa10.74□□□□□ -0.69
SNHG1-215ENST00000540904 HMGB1P09429 215 aaKnown RBP10.74□□□□□ -0.69
SNHG1-215ENST00000540904 CYBAP13498 195 aa10.74□□□□□ -0.69
SNHG1-215ENST00000540904 CPA1P15085 419 aa10.74□□□□□ -0.69
SNHG1-215ENST00000540904 RXRAP19793 462 aa10.74□□□□□ -0.69
SNHG1-215ENST00000540904 LIFRP42702 1097 aa10.74□□□□□ -0.69
SNHG1-215ENST00000540904 QRICH1Q2TAL8 776 aa10.74□□□□□ -0.69
SNHG1-215ENST00000540904 RAB11FIP4Q86YS3 637 aa10.74□□□□□ -0.69
SNHG1-215ENST00000540904 CCDC144CPQ8IYA2 1237 aa10.74□□□□□ -0.69
SNHG1-215ENST00000540904 TRPV1Q8NER1 839 aa10.74□□□□□ -0.69
SNHG1-215ENST00000540904 CTCFLQ8NI51 663 aaPredicted RBP10.74□□□□□ -0.69
SNHG1-215ENST00000540904 KCNB2Q92953 911 aa10.74□□□□□ -0.69
SNHG1-215ENST00000540904 JAKMIP1Q96N16 626 aaKnown RBP10.74□□□□□ -0.69
SNHG1-215ENST00000540904 TINF2Q9BSI4 451 aa10.74□□□□□ -0.69
SNHG1-215ENST00000540904 USP26Q9BXU7 913 aa10.74□□□□□ -0.69
SNHG1-215ENST00000540904 CYP39A1Q9NYL5 469 aa10.74□□□□□ -0.69
SNHG1-215ENST00000540904 SLC12A7Q9Y666 1083 aa10.74□□□□□ -0.69
SNHG1-215ENST00000540904 PFASO15067 1338 aa10.74□□□□□ -0.69
SNHG1-215ENST00000540904 ZNF236Q9UL36 1845 aa10.74□□□□□ -0.69
SNHG1-215ENST00000540904 PTPDC1A2A3K4 754 aa10.73□□□□□ -0.69
SNHG1-215ENST00000540904 EPB41L2O43491 1005 aaKnown RBP10.73□□□□□ -0.69
SNHG1-215ENST00000540904 KIF5BP33176 963 aa10.73□□□□□ -0.69
SNHG1-215ENST00000540904 FGD1P98174 961 aa10.73□□□□□ -0.69
SNHG1-215ENST00000540904 EXOSC10Q01780 885 aaKnown RBP10.73□□□□□ -0.69
SNHG1-215ENST00000540904 BAATQ14032 418 aaPredicted RBP10.73□□□□□ -0.69
SNHG1-215ENST00000540904 SLC35G1Q2M3R5 365 aa10.73□□□□□ -0.69
SNHG1-215ENST00000540904 BLOC1S2Q6QNY1 142 aa10.73□□□□□ -0.69
SNHG1-215ENST00000540904 SYNE3Q6ZMZ3 975 aa10.73□□□□□ -0.69
SNHG1-215ENST00000540904 ZNF467Q7Z7K2 595 aaPredicted RBP10.73□□□□□ -0.69
SNHG1-215ENST00000540904 FBXO11Q86XK2 927 aa10.73□□□□□ -0.69
SNHG1-215ENST00000540904 HOMER1Q86YM7 354 aa10.73□□□□□ -0.69
SNHG1-215ENST00000540904 FAM133AQ8N9E0 248 aa10.73□□□□□ -0.69
SNHG1-215ENST00000540904 CLEC4DQ8WXI8 215 aa10.73□□□□□ -0.69
SNHG1-215ENST00000540904 PIBF1Q8WXW3 757 aa10.73□□□□□ -0.69
SNHG1-215ENST00000540904 FGD4Q96M96 766 aa10.73□□□□□ -0.69
SNHG1-215ENST00000540904 MAP3K14Q99558 947 aa10.73□□□□□ -0.69
SNHG1-215ENST00000540904 CRISPLD2Q9H0B8 497 aa10.73□□□□□ -0.69
SNHG1-215ENST00000540904 DDX20Q9UHI6 824 aaKnown RBP10.73□□□□□ -0.69
SNHG1-215ENST00000540904 CNPY2Q9Y2B0 182 aa10.73□□□□□ -0.69
SNHG1-215ENST00000540904 SOWAHBA6NEL2 793 aa10.72□□□□□ -0.69
SNHG1-215ENST00000540904 ZBTB5O15062 677 aa10.72□□□□□ -0.69
SNHG1-215ENST00000540904 CYTH3O43739 400 aa10.72□□□□□ -0.69
SNHG1-215ENST00000540904 FARP2O94887 1054 aaPredicted RBP10.72□□□□□ -0.69
SNHG1-215ENST00000540904 CALM1P0DP23 149 aa10.72□□□□□ -0.69
SNHG1-215ENST00000540904 CALM2P0DP24 149 aa10.72□□□□□ -0.69
SNHG1-215ENST00000540904 CALM3P0DP25 149 aa10.72□□□□□ -0.69
SNHG1-215ENST00000540904 CASTP20810 708 aaKnown RBP10.72□□□□□ -0.69
SNHG1-215ENST00000540904 CALML3P27482 149 aa10.72□□□□□ -0.69
SNHG1-215ENST00000540904 PSMA5P28066 241 aa10.72□□□□□ -0.69
SNHG1-215ENST00000540904 ANO1Q5XXA6 986 aa10.72□□□□□ -0.69
SNHG1-215ENST00000540904 LHX8Q68G74 356 aa10.72□□□□□ -0.69
SNHG1-215ENST00000540904 APOA5Q6Q788 366 aa10.72□□□□□ -0.69
SNHG1-215ENST00000540904 MAMDC4Q6UXC1 1216 aa10.72□□□□□ -0.69
SNHG1-215ENST00000540904 SLC30A10Q6XR72 485 aa10.72□□□□□ -0.69
SNHG1-215ENST00000540904 SGMS1Q86VZ5 419 aa10.72□□□□□ -0.69
SNHG1-215ENST00000540904 MICU3Q86XE3 530 aa10.72□□□□□ -0.69
SNHG1-215ENST00000540904 MSL3Q8N5Y2 521 aaKnown RBP10.72□□□□□ -0.69
SNHG1-215ENST00000540904 MTMR8Q96EF0 704 aa10.72□□□□□ -0.69
SNHG1-215ENST00000540904 PURBQ96QR8 312 aaKnown RBP10.72□□□□□ -0.69
SNHG1-215ENST00000540904 PIGSQ96S52 555 aa10.72□□□□□ -0.69
SNHG1-215ENST00000540904 AMNQ9BXJ7 453 aa10.72□□□□□ -0.69
SNHG1-215ENST00000540904 RIOX1Q9H6W3 641 aa10.72□□□□□ -0.69
SNHG1-215ENST00000540904 OGDHLQ9ULD0 1010 aa10.72□□□□□ -0.69
SNHG1-215ENST00000540904 NAP1L2Q9ULW6 460 aaPredicted RBP10.72□□□□□ -0.69
SNHG1-215ENST00000540904 SYNGAP1Q96PV0 1343 aa10.72□□□□□ -0.69
SNHG1-215ENST00000540904 BRCA2P51587 3418 aa10.72□□□□□ -0.69
SNHG1-215ENST00000540904 SEPT4O43236 478 aa10.71□□□□□ -0.69
SNHG1-215ENST00000540904 MSCO60682 206 aa10.71□□□□□ -0.69
SNHG1-215ENST00000540904 PPP1R11O60927 126 aaPredicted RBP10.71□□□□□ -0.69
SNHG1-215ENST00000540904 ABCB11O95342 1321 aa10.71□□□□□ -0.69
SNHG1-215ENST00000540904 PLEKHA8P1O95397 391 aa10.71□□□□□ -0.69
SNHG1-215ENST00000540904 SNAI1O95863 264 aaPredicted RBP10.71□□□□□ -0.69
SNHG1-215ENST00000540904 RPS6KB1P23443 525 aa10.71□□□□□ -0.69
SNHG1-215ENST00000540904 GNAQP50148 359 aa10.71□□□□□ -0.69
SNHG1-215ENST00000540904 RPS6P62753 249 aaKnown RBP10.71□□□□□ -0.69
SNHG1-215ENST00000540904 MKRN4PQ13434 485 aaPredicted RBP10.71□□□□□ -0.69
SNHG1-215ENST00000540904 KIAA0100Q14667 2235 aaKnown RBP10.71□□□□□ -0.69
SNHG1-215ENST00000540904 RNF207Q6ZRF8 634 aa10.71□□□□□ -0.69
SNHG1-215ENST00000540904 ARMCX2Q7L311 632 aa10.71□□□□□ -0.69
SNHG1-215ENST00000540904 CMTR1Q8N1G2 835 aaKnown RBP10.71□□□□□ -0.69
SNHG1-215ENST00000540904 FANCBQ8NB91 859 aa10.71□□□□□ -0.69
SNHG1-215ENST00000540904 SPDYE1Q8NFV5 336 aaPredicted RBP10.71□□□□□ -0.69
SNHG1-215ENST00000540904 LZTS2Q9BRK4 669 aa10.71□□□□□ -0.69
SNHG1-215ENST00000540904 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.71□□□□□ -0.69
SNHG1-215ENST00000540904 NRBP1Q9UHY1 535 aa10.71□□□□□ -0.69
SNHG1-215ENST00000540904 ZHX1Q9UKY1 873 aaPredicted RBP10.71□□□□□ -0.69
SNHG1-215ENST00000540904 BRPF3Q9ULD4 1205 aa10.71□□□□□ -0.69
SNHG1-215ENST00000540904 MRPL11Q9Y3B7 192 aaKnown RBP10.71□□□□□ -0.69
SNHG1-215ENST00000540904 PCDHA1Q9Y5I3 950 aa10.71□□□□□ -0.69
SNHG1-215ENST00000540904 DDX49Q9Y6V7 483 aaKnown RBP10.71□□□□□ -0.69
SNHG1-215ENST00000540904 ASTN1O14525 1302 aa10.7□□□□□ -0.7
SNHG1-215ENST00000540904 PNMA6FA0A0J9YX94 578 aa10.7□□□□□ -0.7
SNHG1-215ENST00000540904 KLF18A0A0U1RQI7 1052 aa10.7□□□□□ -0.7
SNHG1-215ENST00000540904 ASB14A6NK59 587 aa10.7□□□□□ -0.7
SNHG1-215ENST00000540904 ZBTB43O43298 467 aa10.7□□□□□ -0.7
SNHG1-215ENST00000540904 ZNF865P0CJ78 1059 aaPredicted RBP10.7□□□□□ -0.7
SNHG1-215ENST00000540904 CAPN2P17655 700 aa10.7□□□□□ -0.7
SNHG1-215ENST00000540904 ACVR2BQ13705 512 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms