RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 PRDX5P30044 214 aa5.74□□□□□ -1.49
SNHG1-214ENST00000540865 HOXA7P31268 230 aaPredicted RBP5.74□□□□□ -1.49
SNHG1-214ENST00000540865 GPC1P35052 558 aa5.74□□□□□ -1.49
SNHG1-214ENST00000540865 HMGCS2P54868 508 aa5.74□□□□□ -1.49
SNHG1-214ENST00000540865 IRX3P78415 501 aaPredicted RBP5.74□□□□□ -1.49
SNHG1-214ENST00000540865 MRPS5P82675 430 aaKnown RBP5.74□□□□□ -1.49
SNHG1-214ENST00000540865 FOXK2Q01167 660 aa5.74□□□□□ -1.49
SNHG1-214ENST00000540865 GRIN2CQ14957 1233 aa5.74□□□□□ -1.49
SNHG1-214ENST00000540865 CCL14Q16627 93 aa5.74□□□□□ -1.49
SNHG1-214ENST00000540865 RABL6Q3YEC7 729 aaPredicted RBP5.74□□□□□ -1.49
SNHG1-214ENST00000540865 LRRC24Q50LG9 513 aa5.74□□□□□ -1.49
SNHG1-214ENST00000540865 RNFT1Q5M7Z0 435 aa5.74□□□□□ -1.49
SNHG1-214ENST00000540865 AKNAD1Q5T1N1 836 aa5.74□□□□□ -1.49
SNHG1-214ENST00000540865 MFSD14CQ5VZR4 134 aa5.74□□□□□ -1.49
SNHG1-214ENST00000540865 SLC39A5Q6ZMH5 540 aa5.74□□□□□ -1.49
SNHG1-214ENST00000540865 PLEKHH3Q7Z736 793 aa5.74□□□□□ -1.49
SNHG1-214ENST00000540865 CCDC84Q86UT8 332 aaPredicted RBP5.74□□□□□ -1.49
SNHG1-214ENST00000540865 SLC9A9Q8IVB4 645 aa5.74□□□□□ -1.49
SNHG1-214ENST00000540865 RETREG2Q8NC44 543 aa5.74□□□□□ -1.49
SNHG1-214ENST00000540865 GTF3C2Q8WUA4 911 aaPredicted RBP5.74□□□□□ -1.49
SNHG1-214ENST00000540865 BADQ92934 168 aa5.74□□□□□ -1.49
SNHG1-214ENST00000540865 KAZALD1Q96I82 304 aa5.74□□□□□ -1.49
SNHG1-214ENST00000540865 SUCLG2Q96I99 432 aa5.74□□□□□ -1.49
SNHG1-214ENST00000540865 PRIMPOLQ96LW4 560 aa5.74□□□□□ -1.49
SNHG1-214ENST00000540865 APBA2Q99767 749 aa5.74□□□□□ -1.49
SNHG1-214ENST00000540865 OSBPL5Q9H0X9 879 aaPredicted RBP5.74□□□□□ -1.49
SNHG1-214ENST00000540865 SCHIP1Q9P0W5 487 aaPredicted RBP5.74□□□□□ -1.49
SNHG1-214ENST00000540865 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.74□□□□□ -1.49
SNHG1-214ENST00000540865 THEGQ9P2T0 379 aa5.74□□□□□ -1.49
SNHG1-214ENST00000540865 DDX20Q9UHI6 824 aaKnown RBP5.74□□□□□ -1.49
SNHG1-214ENST00000540865 ATP11BQ9Y2G3 1177 aa5.74□□□□□ -1.49
SNHG1-214ENST00000540865 RFX7Q2KHR2 1363 aa5.74□□□□□ -1.49
SNHG1-214ENST00000540865 DDX60LQ5H9U9 1706 aaKnown RBP5.74□□□□□ -1.49
SNHG1-214ENST00000540865 UTYO14607 1347 aa5.74□□□□□ -1.49
SNHG1-214ENST00000540865 GAKO14976 1311 aa5.74□□□□□ -1.49
SNHG1-214ENST00000540865 SALL1Q9NSC2 1324 aa5.74□□□□□ -1.49
SNHG1-214ENST00000540865 HSFX4A0A1B0GTS1 333 aaPredicted RBP5.73□□□□□ -1.49
SNHG1-214ENST00000540865 HSFX3A0A1B0GWH4 333 aaPredicted RBP5.73□□□□□ -1.49
SNHG1-214ENST00000540865 PRMT3O60678 531 aa5.73□□□□□ -1.49
SNHG1-214ENST00000540865 GLRX3O76003 335 aaKnown RBP5.73□□□□□ -1.49
SNHG1-214ENST00000540865 SLC5A1P13866 664 aa5.73□□□□□ -1.49
SNHG1-214ENST00000540865 CAP2P40123 477 aa5.73□□□□□ -1.49
SNHG1-214ENST00000540865 HERVK_113P62684 666 aa5.73□□□□□ -1.49
SNHG1-214ENST00000540865 ERVK-24P63145 666 aa5.73□□□□□ -1.49
SNHG1-214ENST00000540865 SNX17Q15036 470 aa5.73□□□□□ -1.49
SNHG1-214ENST00000540865 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.73□□□□□ -1.49
SNHG1-214ENST00000540865 C4orf17Q53FE4 359 aa5.73□□□□□ -1.49
SNHG1-214ENST00000540865 SH3PXD2AQ5TCZ1 1133 aa5.73□□□□□ -1.49
SNHG1-214ENST00000540865 C1orf53Q5VUE5 145 aa5.73□□□□□ -1.49
SNHG1-214ENST00000540865 GPR142Q7Z601 462 aa5.73□□□□□ -1.49
SNHG1-214ENST00000540865 CCAR1Q8IX12 1150 aaKnown RBP5.73□□□□□ -1.49
SNHG1-214ENST00000540865 ARRDC4Q8NCT1 418 aa5.73□□□□□ -1.49
SNHG1-214ENST00000540865 WHAMMQ8TF30 809 aa5.73□□□□□ -1.49
SNHG1-214ENST00000540865 LPIN2Q92539 896 aa5.73□□□□□ -1.49
SNHG1-214ENST00000540865 EDC3Q96F86 508 aaKnown RBP5.73□□□□□ -1.49
SNHG1-214ENST00000540865 RNPC3Q96LT9 517 aaKnown RBP5.73□□□□□ -1.49
SNHG1-214ENST00000540865 P2RX7Q99572 595 aaKnown RBP5.73□□□□□ -1.49
SNHG1-214ENST00000540865 WDR18Q9BV38 432 aa5.73□□□□□ -1.49
SNHG1-214ENST00000540865 ZNF576Q9H609 170 aa5.73□□□□□ -1.49
SNHG1-214ENST00000540865 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.73□□□□□ -1.49
SNHG1-214ENST00000540865 AS3MTQ9HBK9 375 aa5.73□□□□□ -1.49
SNHG1-214ENST00000540865 TXNRD2Q9NNW7 524 aa5.73□□□□□ -1.49
SNHG1-214ENST00000540865 PRDM5Q9NQX1 630 aaPredicted RBP5.73□□□□□ -1.49
SNHG1-214ENST00000540865 PDLIM7Q9NR12 457 aa5.73□□□□□ -1.49
SNHG1-214ENST00000540865 TMOD4Q9NZQ9 345 aa5.73□□□□□ -1.49
SNHG1-214ENST00000540865 RBPJLQ9UBG7 517 aa5.73□□□□□ -1.49
SNHG1-214ENST00000540865 IL16Q14005 1332 aa5.73□□□□□ -1.49
SNHG1-214ENST00000540865 CHD9Q3L8U1 2897 aa5.73□□□□□ -1.49
SNHG1-214ENST00000540865 TRIM43BA6NCK2 446 aa5.72□□□□□ -1.49
SNHG1-214ENST00000540865 C19orf81C9J6K1 198 aa5.72□□□□□ -1.49
SNHG1-214ENST00000540865 KBTBD13C9JR72 458 aa5.72□□□□□ -1.49
SNHG1-214ENST00000540865 M0R2N6 131 aa5.72□□□□□ -1.49
SNHG1-214ENST00000540865 CDK2AP1O14519 115 aa5.72□□□□□ -1.49
SNHG1-214ENST00000540865 VAMP4O75379 141 aa5.72□□□□□ -1.49
SNHG1-214ENST00000540865 MAP4K4O95819 1239 aaPredicted RBP5.72□□□□□ -1.49
SNHG1-214ENST00000540865 HOXC6P09630 235 aa5.72□□□□□ -1.49
SNHG1-214ENST00000540865 SLURP2P0DP57 97 aa5.72□□□□□ -1.49
SNHG1-214ENST00000540865 PLA2G4AP47712 749 aa5.72□□□□□ -1.49
SNHG1-214ENST00000540865 BACE1P56817 501 aa5.72□□□□□ -1.49
SNHG1-214ENST00000540865 PTSQ03393 145 aa5.72□□□□□ -1.49
SNHG1-214ENST00000540865 CCDC27Q2M243 656 aa5.72□□□□□ -1.49
SNHG1-214ENST00000540865 TRIM60Q495X7 471 aa5.72□□□□□ -1.49
SNHG1-214ENST00000540865 ZNF295-AS1Q8N0V1 137 aa5.72□□□□□ -1.49
SNHG1-214ENST00000540865 ZGPATQ8N5A5 531 aaKnown RBP5.72□□□□□ -1.49
SNHG1-214ENST00000540865 ZDHHC1Q8WTX9 485 aa5.72□□□□□ -1.49
SNHG1-214ENST00000540865 SCG3Q8WXD2 468 aaKnown RBP5.72□□□□□ -1.49
SNHG1-214ENST00000540865 TRIM43Q96BQ3 446 aaPredicted RBP5.72□□□□□ -1.49
SNHG1-214ENST00000540865 TIFAQ96CG3 184 aa5.72□□□□□ -1.49
SNHG1-214ENST00000540865 GAS2L1Q99501 681 aaPredicted RBP5.72□□□□□ -1.49
SNHG1-214ENST00000540865 SRCIN1Q9C0H9 1055 aa5.72□□□□□ -1.49
SNHG1-214ENST00000540865 PORCNQ9H237 461 aa5.72□□□□□ -1.49
SNHG1-214ENST00000540865 BICC1Q9H694 974 aaKnown RBP5.72□□□□□ -1.49
SNHG1-214ENST00000540865 CWC22Q9HCG8 908 aaKnown RBP5.72□□□□□ -1.49
SNHG1-214ENST00000540865 DDX4Q9NQI0 724 aaKnown RBP5.72□□□□□ -1.49
SNHG1-214ENST00000540865 GNL3LQ9NVN8 582 aaKnown RBP5.72□□□□□ -1.49
SNHG1-214ENST00000540865 DENND2AQ9ULE3 1009 aa5.72□□□□□ -1.49
SNHG1-214ENST00000540865 HCN4Q9Y3Q4 1203 aa5.72□□□□□ -1.49
SNHG1-214ENST00000540865 MGAMO43451 1857 aa5.72□□□□□ -1.49
SNHG1-214ENST00000540865 DOCK3Q8IZD9 2030 aa5.71□□□□□ -1.5
SNHG1-214ENST00000540865 SLC15A5A6NIM6 579 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms