RNA–Protein interactions for RNA: ENST00000540815.2

LGR5-203, Transcript of leucine rich repeat containing G protein-coupled receptor 5, humanhuman

TSL 1 (best) BASIC

Gene LGR5, Length 2,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5-203ENST00000540815 RRAGBQ5VZM2 374 aa12.74□□□□□ -0.37
LGR5-203ENST00000540815 DPP8Q6V1X1 898 aaPredicted RBP12.74□□□□□ -0.37
LGR5-203ENST00000540815 REXO1L1PQ8IX06 675 aa12.74□□□□□ -0.37
LGR5-203ENST00000540815 TC2NQ8N9U0 490 aa12.74□□□□□ -0.37
LGR5-203ENST00000540815 PIGSQ96S52 555 aa12.74□□□□□ -0.37
LGR5-203ENST00000540815 RWDD2AQ9UIY3 292 aa12.74□□□□□ -0.37
LGR5-203ENST00000540815 TTF2Q9UNY4 1162 aaKnown RBP12.74□□□□□ -0.37
LGR5-203ENST00000540815 CTNND2Q9UQB3 1225 aa12.74□□□□□ -0.37
LGR5-203ENST00000540815 GREB1LQ9C091 1923 aaPredicted RBP12.74□□□□□ -0.37
LGR5-203ENST00000540815 ORC2Q13416 577 aaPredicted RBP12.74□□□□□ -0.37
LGR5-203ENST00000540815 SMC1AQ14683 1233 aaKnown RBP12.74□□□□□ -0.37
LGR5-203ENST00000540815 PLSCR1O15162 318 aa12.73□□□□□ -0.37
LGR5-203ENST00000540815 ZRANB2O95218 330 aaKnown RBP eCLIP12.73□□□□□ -0.37
LGR5-203ENST00000540815 MYL1P05976 194 aa12.73□□□□□ -0.37
LGR5-203ENST00000540815 SNHG28P0DPA3 235 aa12.73□□□□□ -0.37
LGR5-203ENST00000540815 AKR1B1P15121 316 aa12.73□□□□□ -0.37
LGR5-203ENST00000540815 SEMA3FQ13275 785 aa12.73□□□□□ -0.37
LGR5-203ENST00000540815 NAALADL2Q58DX5 795 aa12.73□□□□□ -0.37
LGR5-203ENST00000540815 TEX35Q5T0J7 233 aa12.73□□□□□ -0.37
LGR5-203ENST00000540815 HHIPL2Q6UWX4 724 aa12.73□□□□□ -0.37
LGR5-203ENST00000540815 CLEC10AQ8IUN9 316 aa12.73□□□□□ -0.37
LGR5-203ENST00000540815 AK8Q96MA6 479 aa12.73□□□□□ -0.37
LGR5-203ENST00000540815 BAG1Q99933 345 aaPredicted RBP12.73□□□□□ -0.37
LGR5-203ENST00000540815 USP40Q9NVE5 1235 aa12.73□□□□□ -0.37
LGR5-203ENST00000540815 ADD3Q9UEY8 706 aaKnown RBP12.73□□□□□ -0.37
LGR5-203ENST00000540815 STX10O60499 249 aa12.73□□□□□ -0.37
LGR5-203ENST00000540815 PHACTR2O75167 634 aa12.73□□□□□ -0.37
LGR5-203ENST00000540815 MYCNP04198 464 aaPredicted RBP12.73□□□□□ -0.37
LGR5-203ENST00000540815 MMP10P09238 476 aa12.73□□□□□ -0.37
LGR5-203ENST00000540815 OR52Z1P0C646 297 aa12.73□□□□□ -0.37
LGR5-203ENST00000540815 SLURP2P0DP57 97 aa12.73□□□□□ -0.37
LGR5-203ENST00000540815 PBX1P40424 430 aa12.73□□□□□ -0.37
LGR5-203ENST00000540815 UBA7P41226 1012 aa12.73□□□□□ -0.37
LGR5-203ENST00000540815 PACS2Q86VP3 889 aa12.73□□□□□ -0.37
LGR5-203ENST00000540815 MASTLQ96GX5 879 aa12.73□□□□□ -0.37
LGR5-203ENST00000540815 VAT1LQ9HCJ6 419 aa12.73□□□□□ -0.37
LGR5-203ENST00000540815 H3BQF6 201 aa12.72□□□□□ -0.37
LGR5-203ENST00000540815 TBC1D8O95759 1140 aa12.72□□□□□ -0.37
LGR5-203ENST00000540815 SCNN1DP51172 638 aa12.72□□□□□ -0.37
LGR5-203ENST00000540815 PAK1Q13153 545 aa12.72□□□□□ -0.37
LGR5-203ENST00000540815 NEK8Q86SG6 692 aa12.72□□□□□ -0.37
LGR5-203ENST00000540815 FLAD1Q8NFF5 587 aa12.72□□□□□ -0.37
LGR5-203ENST00000540815 CUEDC2Q9H467 287 aa12.72□□□□□ -0.37
LGR5-203ENST00000540815 SUGCTQ9HAC7 445 aa12.72□□□□□ -0.37
LGR5-203ENST00000540815 MAGEF1Q9HAY2 307 aa12.72□□□□□ -0.37
LGR5-203ENST00000540815 KCNQ5Q9NR82 932 aa12.72□□□□□ -0.37
LGR5-203ENST00000540815 SERPINB13Q9UIV8 391 aa12.72□□□□□ -0.37
LGR5-203ENST00000540815 RRP15Q9Y3B9 282 aaKnown RBP12.72□□□□□ -0.37
LGR5-203ENST00000540815 PP2D1A8MPX8 630 aa12.72□□□□□ -0.37
LGR5-203ENST00000540815 TEX33O43247 280 aa12.72□□□□□ -0.37
LGR5-203ENST00000540815 ZSCAN12O43309 604 aa12.72□□□□□ -0.37
LGR5-203ENST00000540815 CCNT1O60563 726 aaKnown RBP12.72□□□□□ -0.37
LGR5-203ENST00000540815 N4BP1O75113 896 aaKnown RBP12.72□□□□□ -0.37
LGR5-203ENST00000540815 KCNB1Q14721 858 aa12.72□□□□□ -0.37
LGR5-203ENST00000540815 FILIP1LQ4L180 1135 aa12.72□□□□□ -0.37
LGR5-203ENST00000540815 MSL1Q68DK7 614 aa12.72□□□□□ -0.37
LGR5-203ENST00000540815 MNS1Q8NEH6 495 aa12.72□□□□□ -0.37
LGR5-203ENST00000540815 LRRC15Q8TF66 581 aa12.72□□□□□ -0.37
LGR5-203ENST00000540815 UBA5Q9GZZ9 404 aa12.72□□□□□ -0.37
LGR5-203ENST00000540815 TMX4Q9H1E5 349 aaPredicted RBP12.72□□□□□ -0.37
LGR5-203ENST00000540815 LIMA1Q9UHB6 759 aaKnown RBP12.72□□□□□ -0.37
LGR5-203ENST00000540815 ADAM21Q9UKJ8 722 aa12.72□□□□□ -0.37
LGR5-203ENST00000540815 PARP3Q9Y6F1 533 aa12.72□□□□□ -0.37
LGR5-203ENST00000540815 FRMPD2Q68DX3 1309 aaPredicted RBP12.72□□□□□ -0.37
LGR5-203ENST00000540815 TTLL1O95922 423 aa12.71□□□□□ -0.37
LGR5-203ENST00000540815 CASQ1P31415 396 aa12.71□□□□□ -0.37
LGR5-203ENST00000540815 ADKP55263 362 aaKnown RBP12.71□□□□□ -0.37
LGR5-203ENST00000540815 LETM2Q2VYF4 491 aa12.71□□□□□ -0.37
LGR5-203ENST00000540815 CCDC93Q567U6 631 aa12.71□□□□□ -0.37
LGR5-203ENST00000540815 CDC42EP5Q6NZY7 148 aa12.71□□□□□ -0.37
LGR5-203ENST00000540815 REXO1Q8N1G1 1221 aaKnown RBP12.71□□□□□ -0.37
LGR5-203ENST00000540815 RASSF8Q8NHQ8 419 aa12.71□□□□□ -0.37
LGR5-203ENST00000540815 NELFBQ8WX92 580 aa12.71□□□□□ -0.37
LGR5-203ENST00000540815 PANX2Q96RD6 677 aa12.71□□□□□ -0.37
LGR5-203ENST00000540815 KBTBD4Q9NVX7 518 aa12.71□□□□□ -0.37
LGR5-203ENST00000540815 MYH4Q9Y623 1939 aa12.71□□□□□ -0.37
LGR5-203ENST00000540815 AKR1B15C9JRZ8 316 aaPredicted RBP12.71□□□□□ -0.37
LGR5-203ENST00000540815 APBA3O96018 575 aa12.71□□□□□ -0.37
LGR5-203ENST00000540815 SHMT1P34896 483 aa12.71□□□□□ -0.37
LGR5-203ENST00000540815 SPAG1Q07617 926 aa12.71□□□□□ -0.37
LGR5-203ENST00000540815 MCM6Q14566 821 aa12.71□□□□□ -0.37
LGR5-203ENST00000540815 LRRC47Q8N1G4 583 aaKnown RBP12.71□□□□□ -0.37
LGR5-203ENST00000540815 TEKT1Q969V4 418 aa12.71□□□□□ -0.37
LGR5-203ENST00000540815 ITIH6Q6UXX5 1313 aa12.71□□□□□ -0.38
LGR5-203ENST00000540815 PHLPP2Q6ZVD8 1323 aa12.71□□□□□ -0.38
LGR5-203ENST00000540815 ZNF646O15015 1829 aaPredicted RBP12.71□□□□□ -0.38
LGR5-203ENST00000540815 SCN9AQ15858 1988 aa12.71□□□□□ -0.38
LGR5-203ENST00000540815 LRRC10BA6NIK2 292 aa12.7□□□□□ -0.38
LGR5-203ENST00000540815 G3V3G9 751 aa12.7□□□□□ -0.38
LGR5-203ENST00000540815 TFRCP02786 760 aaKnown RBP12.7□□□□□ -0.38
LGR5-203ENST00000540815 ETF1P62495 437 aaKnown RBP12.7□□□□□ -0.38
LGR5-203ENST00000540815 DCAF8Q5TAQ9 597 aa12.7□□□□□ -0.38
LGR5-203ENST00000540815 APOBEC3HQ6NTF7 200 aaKnown RBP12.7□□□□□ -0.38
LGR5-203ENST00000540815 CABP7Q86V35 215 aa12.7□□□□□ -0.38
LGR5-203ENST00000540815 TBCKQ8TEA7 893 aa12.7□□□□□ -0.38
LGR5-203ENST00000540815 L2HGDHQ9H9P8 463 aa12.7□□□□□ -0.38
LGR5-203ENST00000540815 PPP2R2CQ9Y2T4 447 aa12.7□□□□□ -0.38
LGR5-203ENST00000540815 PCDHAC2Q9Y5I4 1007 aa12.7□□□□□ -0.38
LGR5-203ENST00000540815 GOLGA6L9A6NEM1 432 aa12.7□□□□□ -0.38
LGR5-203ENST00000540815 KLRC4O43908 158 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms