RNA–Protein interactions for RNA: ENST00000540784.5

DDB1-218, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-218ENST00000540784 PCDHA1Q9Y5I3 950 aa17.95■□□□□ 0.46
DDB1-218ENST00000540784 PARP14Q460N5 1801 aa17.95■□□□□ 0.46
DDB1-218ENST00000540784 ABCB11O95342 1321 aa17.95■□□□□ 0.46
DDB1-218ENST00000540784 ST18O60284 1047 aa17.94■□□□□ 0.46
DDB1-218ENST00000540784 PFKFB2O60825 505 aa17.94■□□□□ 0.46
DDB1-218ENST00000540784 ADORA2AP29274 412 aa17.94■□□□□ 0.46
DDB1-218ENST00000540784 RGS2P41220 211 aa17.94■□□□□ 0.46
DDB1-218ENST00000540784 FUT2Q10981 343 aa17.94■□□□□ 0.46
DDB1-218ENST00000540784 IRF5Q13568 498 aa17.94■□□□□ 0.46
DDB1-218ENST00000540784 MUM1L1Q5H9M0 696 aa17.94■□□□□ 0.46
DDB1-218ENST00000540784 COL13A1Q5TAT6 717 aaPredicted RBP17.94■□□□□ 0.46
DDB1-218ENST00000540784 FBXO46Q6PJ61 603 aaPredicted RBP17.94■□□□□ 0.46
DDB1-218ENST00000540784 CPLX2Q6PUV4 134 aaKnown RBP17.94■□□□□ 0.46
DDB1-218ENST00000540784 USP6NLQ92738 828 aa17.94■□□□□ 0.46
DDB1-218ENST00000540784 SLC5A4Q9NY91 659 aa17.94■□□□□ 0.46
DDB1-218ENST00000540784 MRPL11Q9Y3B7 192 aaKnown RBP17.94■□□□□ 0.46
DDB1-218ENST00000540784 A0A0G2JMZ2 1700 aa17.93■□□□□ 0.46
DDB1-218ENST00000540784 hCG_1642624A0A1W2PR95 340 aa17.93■□□□□ 0.46
DDB1-218ENST00000540784 CPLX1O14810 134 aa17.93■□□□□ 0.46
DDB1-218ENST00000540784 PPP1R11O60927 126 aaPredicted RBP17.93■□□□□ 0.46
DDB1-218ENST00000540784 XRCC5P13010 732 aaKnown RBP17.93■□□□□ 0.46
DDB1-218ENST00000540784 TAL1P17542 331 aaPredicted RBP17.93■□□□□ 0.46
DDB1-218ENST00000540784 CLEC4DQ8WXI8 215 aa17.93■□□□□ 0.46
DDB1-218ENST00000540784 PTCH2Q9Y6C5 1203 aa17.93■□□□□ 0.46
DDB1-218ENST00000540784 NID2Q14112 1375 aa17.92■□□□□ 0.46
DDB1-218ENST00000540784 ADCY3O60266 1144 aa17.92■□□□□ 0.46
DDB1-218ENST00000540784 IFNAR1P17181 557 aa17.92■□□□□ 0.46
DDB1-218ENST00000540784 AKAP17AQ02040 695 aaKnown RBP17.92■□□□□ 0.46
DDB1-218ENST00000540784 ME3Q16798 604 aa17.92■□□□□ 0.46
DDB1-218ENST00000540784 NSMFQ6X4W1 530 aa17.92■□□□□ 0.46
DDB1-218ENST00000540784 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.92■□□□□ 0.46
DDB1-218ENST00000540784 MCF2L2Q86YR7 1114 aa17.92■□□□□ 0.46
DDB1-218ENST00000540784 RGS22Q8NE09 1264 aa17.92■□□□□ 0.46
DDB1-218ENST00000540784 ZSCAN31Q96LW9 406 aaPredicted RBP17.92■□□□□ 0.46
DDB1-218ENST00000540784 MCOLN1Q9GZU1 580 aa17.92■□□□□ 0.46
DDB1-218ENST00000540784 COL11A1P12107 1806 aaPredicted RBP17.91■□□□□ 0.46
DDB1-218ENST00000540784 PRPF3O43395 683 aaKnown RBP17.91■□□□□ 0.46
DDB1-218ENST00000540784 COBLO75128 1261 aa17.91■□□□□ 0.46
DDB1-218ENST00000540784 PGK2P07205 417 aa17.91■□□□□ 0.46
DDB1-218ENST00000540784 HOXC6P09630 235 aa17.91■□□□□ 0.46
DDB1-218ENST00000540784 SSRP1Q08945 709 aaKnown RBP17.91■□□□□ 0.46
DDB1-218ENST00000540784 SCRN1Q12765 414 aa17.91■□□□□ 0.46
DDB1-218ENST00000540784 NTRK3Q16288 839 aa17.91■□□□□ 0.46
DDB1-218ENST00000540784 TRMT44Q8IYL2 757 aaKnown RBP17.91■□□□□ 0.46
DDB1-218ENST00000540784 NECAB1Q8N987 351 aa17.91■□□□□ 0.46
DDB1-218ENST00000540784 A1CFQ9NQ94 594 aaKnown RBP17.91■□□□□ 0.46
DDB1-218ENST00000540784 RBM27Q9P2N5 1060 aaKnown RBP17.91■□□□□ 0.46
DDB1-218ENST00000540784 POTEB2H3BUK9 544 aa17.9■□□□□ 0.46
DDB1-218ENST00000540784 NFIBO00712 420 aa17.9■□□□□ 0.46
DDB1-218ENST00000540784 CDKL5O76039 1030 aa17.9■□□□□ 0.46
DDB1-218ENST00000540784 BAATQ14032 418 aaPredicted RBP17.9■□□□□ 0.46
DDB1-218ENST00000540784 RNF207Q6ZRF8 634 aa17.9■□□□□ 0.46
DDB1-218ENST00000540784 TRIM22Q8IYM9 498 aa17.9■□□□□ 0.46
DDB1-218ENST00000540784 NPLOC4Q8TAT6 608 aa17.9■□□□□ 0.46
DDB1-218ENST00000540784 PXYLP1Q8TE99 480 aa17.9■□□□□ 0.46
DDB1-218ENST00000540784 PHKBQ93100 1093 aa17.9■□□□□ 0.46
DDB1-218ENST00000540784 SLC26A6Q9BXS9 759 aa17.9■□□□□ 0.46
DDB1-218ENST00000540784 MAF1Q9H063 256 aa17.9■□□□□ 0.46
DDB1-218ENST00000540784 CYP39A1Q9NYL5 469 aa17.9■□□□□ 0.46
DDB1-218ENST00000540784 DIS3Q9Y2L1 958 aaKnown RBP17.9■□□□□ 0.46
DDB1-218ENST00000540784 PFASO15067 1338 aa17.9■□□□□ 0.46
DDB1-218ENST00000540784 CNTNAP5Q8WYK1 1306 aa17.9■□□□□ 0.46
DDB1-218ENST00000540784 DNAJC25-GNG10A0A024R161 153 aa17.89■□□□□ 0.45
DDB1-218ENST00000540784 PTPDC1A2A3K4 754 aa17.89■□□□□ 0.45
DDB1-218ENST00000540784 GRK4P32298 578 aa17.89■□□□□ 0.45
DDB1-218ENST00000540784 MCM2P49736 904 aa17.89■□□□□ 0.45
DDB1-218ENST00000540784 ZNF792Q3KQV3 632 aa17.89■□□□□ 0.45
DDB1-218ENST00000540784 HEATR3Q7Z4Q2 680 aa17.89■□□□□ 0.45
DDB1-218ENST00000540784 SLAIN1Q8ND83 568 aa17.89■□□□□ 0.45
DDB1-218ENST00000540784 TBC1D5Q92609 795 aa17.89■□□□□ 0.45
DDB1-218ENST00000540784 APBA2Q99767 749 aa17.89■□□□□ 0.45
DDB1-218ENST00000540784 RNF26Q9BY78 433 aaPredicted RBP17.89■□□□□ 0.45
DDB1-218ENST00000540784 BIN2Q9UBW5 565 aaPredicted RBP17.89■□□□□ 0.45
DDB1-218ENST00000540784 MGAMO43451 1857 aa17.88■□□□□ 0.45
DDB1-218ENST00000540784 PPFIA3O75145 1194 aa17.88■□□□□ 0.45
DDB1-218ENST00000540784 LARGE1O95461 756 aa17.88■□□□□ 0.45
DDB1-218ENST00000540784 ELNP15502 786 aa17.88■□□□□ 0.45
DDB1-218ENST00000540784 CALML3P27482 149 aa17.88■□□□□ 0.45
DDB1-218ENST00000540784 PFKFB3Q16875 520 aaPredicted RBP17.88■□□□□ 0.45
DDB1-218ENST00000540784 SLC9C1Q4G0N8 1177 aa17.88■□□□□ 0.45
DDB1-218ENST00000540784 SAMD3Q8N6K7 520 aa17.88■□□□□ 0.45
DDB1-218ENST00000540784 GTF3C6Q969F1 213 aa17.88■□□□□ 0.45
DDB1-218ENST00000540784 SH2B1Q9NRF2 756 aaPredicted RBP17.88■□□□□ 0.45
DDB1-218ENST00000540784 ZSWIM8A7E2V4 1837 aa17.88■□□□□ 0.45
DDB1-218ENST00000540784 CFBP00751 764 aa17.87■□□□□ 0.45
DDB1-218ENST00000540784 SCG2P13521 617 aa17.87■□□□□ 0.45
DDB1-218ENST00000540784 RPS6P62753 249 aaKnown RBP17.87■□□□□ 0.45
DDB1-218ENST00000540784 CNTN2Q02246 1040 aa17.87■□□□□ 0.45
DDB1-218ENST00000540784 CCL14Q16627 93 aa17.87■□□□□ 0.45
DDB1-218ENST00000540784 FAM133AQ8N9E0 248 aa17.87■□□□□ 0.45
DDB1-218ENST00000540784 SH3TC2Q8TF17 1288 aa17.87■□□□□ 0.45
DDB1-218ENST00000540784 GPKOWQ92917 476 aaPredicted RBP eCLIP17.87■□□□□ 0.45
DDB1-218ENST00000540784 MAML3Q96JK9 1138 aa17.87■□□□□ 0.45
DDB1-218ENST00000540784 MAP3K20Q9NYL2 800 aaKnown RBP17.87■□□□□ 0.45
DDB1-218ENST00000540784 BAZ2BQ9UIF8 2168 aaKnown RBP17.86■□□□□ 0.45
DDB1-218ENST00000540784 GCOM1H8Y6P7 765 aaPredicted RBP17.86■□□□□ 0.45
DDB1-218ENST00000540784 hCG_1984214I3L0E3 225 aa17.86■□□□□ 0.45
DDB1-218ENST00000540784 POLR2MP0CAP2 368 aa17.86■□□□□ 0.45
DDB1-218ENST00000540784 PKN1Q16512 942 aa17.86■□□□□ 0.45
DDB1-218ENST00000540784 MFSD14CQ5VZR4 134 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms