RNA–Protein interactions for RNA: ENST00000539702.1

DDX11-216, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 951 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-216ENST00000539702 FGRP09769 529 aa16■□□□□ 0.15
DDX11-216ENST00000539702 NOVP48745 357 aa16■□□□□ 0.15
DDX11-216ENST00000539702 HDAC1Q13547 482 aaPredicted RBP16■□□□□ 0.15
DDX11-216ENST00000539702 MCMDC2Q4G0Z9 681 aa16■□□□□ 0.15
DDX11-216ENST00000539702 MFSD5Q6N075 450 aa16■□□□□ 0.15
DDX11-216ENST00000539702 NSMFQ6X4W1 530 aa16■□□□□ 0.15
DDX11-216ENST00000539702 PHF6Q8IWS0 365 aaKnown RBP eCLIP16■□□□□ 0.15
DDX11-216ENST00000539702 CYP39A1Q9NYL5 469 aa16■□□□□ 0.15
DDX11-216ENST00000539702 UNC80Q8N2C7 3258 aa16■□□□□ 0.15
DDX11-216ENST00000539702 LCTP09848 1927 aa16■□□□□ 0.15
DDX11-216ENST00000539702 LRRC37A2A6NM11 1700 aa15.99■□□□□ 0.15
DDX11-216ENST00000539702 ASTN1O14525 1302 aa15.99■□□□□ 0.15
DDX11-216ENST00000539702 A0A0D9SFI3 127 aa15.99■□□□□ 0.15
DDX11-216ENST00000539702 TLR3O15455 904 aaKnown RBP15.99■□□□□ 0.15
DDX11-216ENST00000539702 ICAM1P05362 532 aa15.99■□□□□ 0.15
DDX11-216ENST00000539702 TOP1P11387 765 aaKnown RBP15.99■□□□□ 0.15
DDX11-216ENST00000539702 SLC16A2P36021 539 aa15.99■□□□□ 0.15
DDX11-216ENST00000539702 NKX3-2P78367 333 aa15.99■□□□□ 0.15
DDX11-216ENST00000539702 TTBK2Q6IQ55 1244 aa15.99■□□□□ 0.15
DDX11-216ENST00000539702 TLK2Q86UE8 772 aa15.99■□□□□ 0.15
DDX11-216ENST00000539702 FAM126BQ8IXS8 530 aa15.99■□□□□ 0.15
DDX11-216ENST00000539702 MYLIPQ8WY64 445 aa15.99■□□□□ 0.15
DDX11-216ENST00000539702 AP5M1Q9H0R1 490 aa15.99■□□□□ 0.15
DDX11-216ENST00000539702 GNEQ9Y223 722 aaKnown RBP15.99■□□□□ 0.15
DDX11-216ENST00000539702 DDX49Q9Y6V7 483 aaKnown RBP15.99■□□□□ 0.15
DDX11-216ENST00000539702 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.98■□□□□ 0.15
DDX11-216ENST00000539702 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.98■□□□□ 0.15
DDX11-216ENST00000539702 DYNC1LI2O43237 492 aaPredicted RBP15.98■□□□□ 0.15
DDX11-216ENST00000539702 HSPD1P10809 573 aaKnown RBP15.98■□□□□ 0.15
DDX11-216ENST00000539702 SMPD1P17405 629 aa15.98■□□□□ 0.15
DDX11-216ENST00000539702 NMIQ13287 307 aaPredicted RBP15.98■□□□□ 0.15
DDX11-216ENST00000539702 PPIGQ13427 754 aaKnown RBP eCLIP15.98■□□□□ 0.151e-8■■■■□ 22.6
DDX11-216ENST00000539702 IQSEC1Q6DN90 963 aa15.98■□□□□ 0.15
DDX11-216ENST00000539702 CXCL17Q6UXB2 119 aa15.98■□□□□ 0.15
DDX11-216ENST00000539702 EEPD1Q7L9B9 569 aa15.98■□□□□ 0.15
DDX11-216ENST00000539702 FBXO16Q8IX29 292 aaPredicted RBP15.98■□□□□ 0.15
DDX11-216ENST00000539702 TMEM199Q8N511 208 aa15.98■□□□□ 0.15
DDX11-216ENST00000539702 MAFAQ8NHW3 353 aaPredicted RBP15.98■□□□□ 0.15
DDX11-216ENST00000539702 TMEM47Q9BQJ4 181 aa15.98■□□□□ 0.15
DDX11-216ENST00000539702 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.98■□□□□ 0.153e-7■■■■■ 35.2
DDX11-216ENST00000539702 RANBP17Q9H2T7 1088 aaKnown RBP15.98■□□□□ 0.15
DDX11-216ENST00000539702 GPCPD1Q9NPB8 672 aa15.98■□□□□ 0.15
DDX11-216ENST00000539702 PDGFCQ9NRA1 345 aa15.98■□□□□ 0.15
DDX11-216ENST00000539702 FRMPD2Q68DX3 1309 aaPredicted RBP15.97■□□□□ 0.15
DDX11-216ENST00000539702 TMEM265A0A087WTH1 108 aa15.97■□□□□ 0.15
DDX11-216ENST00000539702 TRIM6-TRIM34B2RNG4 842 aa15.97■□□□□ 0.15
DDX11-216ENST00000539702 CABYRO75952 493 aa15.97■□□□□ 0.15
DDX11-216ENST00000539702 CSF2RAP15509 400 aa15.97■□□□□ 0.15
DDX11-216ENST00000539702 PTGS1P23219 599 aa15.97■□□□□ 0.15
DDX11-216ENST00000539702 HAND2P61296 217 aa15.97■□□□□ 0.15
DDX11-216ENST00000539702 FSCN1Q16658 493 aaKnown RBP15.97■□□□□ 0.15
DDX11-216ENST00000539702 SYDE2Q5VT97 1194 aa15.97■□□□□ 0.15
DDX11-216ENST00000539702 TAPT1Q6NXT6 567 aa15.97■□□□□ 0.15
DDX11-216ENST00000539702 BTNL9Q6UXG8 535 aa15.97■□□□□ 0.15
DDX11-216ENST00000539702 ZNF589Q86UQ0 364 aaPredicted RBP15.97■□□□□ 0.15
DDX11-216ENST00000539702 TICAM2Q86XR7 235 aa15.97■□□□□ 0.15
DDX11-216ENST00000539702 PURBQ96QR8 312 aaKnown RBP15.97■□□□□ 0.15
DDX11-216ENST00000539702 PPP1R12CQ9BZL4 782 aa15.97■□□□□ 0.15
DDX11-216ENST00000539702 LNPKQ9C0E8 428 aa15.97■□□□□ 0.15
DDX11-216ENST00000539702 TCP11L1Q9NUJ3 509 aa15.97■□□□□ 0.15
DDX11-216ENST00000539702 CDH23Q9H251 3354 aa15.97■□□□□ 0.15
DDX11-216ENST00000539702 ZEB2O60315 1214 aa15.96■□□□□ 0.15
DDX11-216ENST00000539702 CD4P01730 458 aa15.96■□□□□ 0.15
DDX11-216ENST00000539702 FOSL2P15408 326 aa15.96■□□□□ 0.15
DDX11-216ENST00000539702 BAATQ14032 418 aaPredicted RBP15.96■□□□□ 0.15
DDX11-216ENST00000539702 TMEM240Q5SV17 173 aa15.96■□□□□ 0.15
DDX11-216ENST00000539702 TMEM63BQ5T3F8 832 aa15.96■□□□□ 0.15
DDX11-216ENST00000539702 KIAA1211Q6ZU35 1233 aa15.96■□□□□ 0.15
DDX11-216ENST00000539702 C16orf59Q7L2K0 433 aa15.96■□□□□ 0.15
DDX11-216ENST00000539702 RILPL2Q969X0 211 aa15.96■□□□□ 0.15
DDX11-216ENST00000539702 COL25A1Q9BXS0 654 aaPredicted RBP15.96■□□□□ 0.15
DDX11-216ENST00000539702 VTA1Q9NP79 307 aa15.96■□□□□ 0.15
DDX11-216ENST00000539702 ADD3Q9UEY8 706 aaKnown RBP15.96■□□□□ 0.15
DDX11-216ENST00000539702 ZMYM6O95789 1325 aa15.95■□□□□ 0.14
DDX11-216ENST00000539702 CCDC171Q6TFL3 1326 aa15.95■□□□□ 0.14
DDX11-216ENST00000539702 PTPDC1A2A3K4 754 aa15.95■□□□□ 0.14
DDX11-216ENST00000539702 NFIBO00712 420 aa15.95■□□□□ 0.14
DDX11-216ENST00000539702 ACRP10323 421 aa15.95■□□□□ 0.14
DDX11-216ENST00000539702 PDHBP11177 359 aa15.95■□□□□ 0.14
DDX11-216ENST00000539702 DNAJB2P25686 324 aa15.95■□□□□ 0.14
DDX11-216ENST00000539702 CYP2C18P33260 490 aa15.95■□□□□ 0.14
DDX11-216ENST00000539702 ITGA7Q13683 1181 aa15.95■□□□□ 0.14
DDX11-216ENST00000539702 MFSD6Q6ZSS7 791 aa15.95■□□□□ 0.14
DDX11-216ENST00000539702 SLC43A3Q8NBI5 491 aa15.95■□□□□ 0.14
DDX11-216ENST00000539702 MORC4Q8TE76 937 aa15.95■□□□□ 0.14
DDX11-216ENST00000539702 Q9Y3F1 56 aa15.95■□□□□ 0.14
DDX11-216ENST00000539702 ALDH5A1P51649 535 aaPredicted RBP15.94■□□□□ 0.14
DDX11-216ENST00000539702 AKNAD1Q5T1N1 836 aa15.94■□□□□ 0.14
DDX11-216ENST00000539702 B4GALNT3Q6L9W6 998 aa15.94■□□□□ 0.14
DDX11-216ENST00000539702 PSRC1Q6PGN9 363 aaPredicted RBP15.94■□□□□ 0.14
DDX11-216ENST00000539702 ZNF365Q70YC5 407 aa15.94■□□□□ 0.14
DDX11-216ENST00000539702 TTC14Q96N46 770 aa15.94■□□□□ 0.14
DDX11-216ENST00000539702 EYSQ5T1H1 3165 aa15.94■□□□□ 0.14
DDX11-216ENST00000539702 GRIN2DO15399 1336 aa15.94■□□□□ 0.14
DDX11-216ENST00000539702 PCP11498 1178 aaKnown RBP15.93■□□□□ 0.14
DDX11-216ENST00000539702 MFAP1P55081 439 aaKnown RBP15.93■□□□□ 0.14
DDX11-216ENST00000539702 PSMC6P62333 389 aa15.93■□□□□ 0.14
DDX11-216ENST00000539702 ZNF543Q08ER8 600 aa15.93■□□□□ 0.14
DDX11-216ENST00000539702 GRIN2CQ14957 1233 aa15.93■□□□□ 0.14
DDX11-216ENST00000539702 DUSP28Q4G0W2 176 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms