RNA–Protein interactions for RNA: ENST00000539687.5

SPARC-209, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 511 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-209ENST00000539687 KCNA3P22001 575 aa11.49□□□□□ -0.57
SPARC-209ENST00000539687 EIF6P56537 245 aaKnown RBP11.49□□□□□ -0.57
SPARC-209ENST00000539687 DPYDQ12882 1025 aa11.49□□□□□ -0.57
SPARC-209ENST00000539687 STIM1Q13586 685 aa11.49□□□□□ -0.57
SPARC-209ENST00000539687 KCNB1Q14721 858 aa11.49□□□□□ -0.57
SPARC-209ENST00000539687 NCAPHQ15003 741 aa11.49□□□□□ -0.57
SPARC-209ENST00000539687 E2F4Q16254 413 aa11.49□□□□□ -0.57
SPARC-209ENST00000539687 LETM2Q2VYF4 491 aa11.49□□□□□ -0.57
SPARC-209ENST00000539687 CIAPIN1Q6FI81 312 aa11.49□□□□□ -0.57
SPARC-209ENST00000539687 MOXD1Q6UVY6 613 aa11.49□□□□□ -0.57
SPARC-209ENST00000539687 CCDC186Q7Z3E2 898 aa11.49□□□□□ -0.57
SPARC-209ENST00000539687 ANKRD20A12PQ8NF67 263 aa11.49□□□□□ -0.57
SPARC-209ENST00000539687 TBCKQ8TEA7 893 aa11.49□□□□□ -0.57
SPARC-209ENST00000539687 ERCC4Q92889 916 aaPredicted RBP11.49□□□□□ -0.57
SPARC-209ENST00000539687 CALML4Q96GE6 196 aa11.49□□□□□ -0.57
SPARC-209ENST00000539687 PRMT6Q96LA8 375 aaPredicted RBP11.49□□□□□ -0.57
SPARC-209ENST00000539687 CTAGE1Q96RT6 745 aa11.49□□□□□ -0.57
SPARC-209ENST00000539687 SGIP1Q9BQI5 828 aa11.49□□□□□ -0.57
SPARC-209ENST00000539687 AMNQ9BXJ7 453 aa11.49□□□□□ -0.57
SPARC-209ENST00000539687 CD2APQ9Y5K6 639 aa11.49□□□□□ -0.57
SPARC-209ENST00000539687 LTBP3Q9NS15 1303 aa11.49□□□□□ -0.57
SPARC-209ENST00000539687 CEP350Q5VT06 3117 aa11.49□□□□□ -0.57
SPARC-209ENST00000539687 F5H6K3 240 aa11.48□□□□□ -0.57
SPARC-209ENST00000539687 CCP110O43303 1012 aa11.48□□□□□ -0.57
SPARC-209ENST00000539687 BMP3P12645 472 aa11.48□□□□□ -0.57
SPARC-209ENST00000539687 VEGFAP15692 232 aaPredicted RBP11.48□□□□□ -0.57
SPARC-209ENST00000539687 CLK2P49760 499 aaKnown RBP11.48□□□□□ -0.57
SPARC-209ENST00000539687 USP11P51784 963 aa11.48□□□□□ -0.57
SPARC-209ENST00000539687 CACNB3P54284 484 aa11.48□□□□□ -0.57
SPARC-209ENST00000539687 FANCCQ00597 558 aa11.48□□□□□ -0.57
SPARC-209ENST00000539687 KLRC3Q07444 240 aa11.48□□□□□ -0.57
SPARC-209ENST00000539687 SPAG1Q07617 926 aa11.48□□□□□ -0.57
SPARC-209ENST00000539687 PDIA5Q14554 519 aa11.48□□□□□ -0.57
SPARC-209ENST00000539687 SEPT2Q15019 361 aa11.48□□□□□ -0.57
SPARC-209ENST00000539687 CALCRLQ16602 461 aa11.48□□□□□ -0.57
SPARC-209ENST00000539687 PDXDC2PQ6P474 469 aa11.48□□□□□ -0.57
SPARC-209ENST00000539687 BTNL9Q6UXG8 535 aa11.48□□□□□ -0.57
SPARC-209ENST00000539687 SH3BP5LQ7L8J4 393 aa11.48□□□□□ -0.57
SPARC-209ENST00000539687 CABP7Q86V35 215 aa11.48□□□□□ -0.57
SPARC-209ENST00000539687 ZFPM1Q8IX07 1006 aa11.48□□□□□ -0.57
SPARC-209ENST00000539687 CCDC112Q8NEF3 446 aa11.48□□□□□ -0.57
SPARC-209ENST00000539687 RASGRP4Q8TDF6 673 aa11.48□□□□□ -0.57
SPARC-209ENST00000539687 HOOK2Q96ED9 719 aa11.48□□□□□ -0.57
SPARC-209ENST00000539687 TTC12Q9H892 705 aaPredicted RBP11.48□□□□□ -0.57
SPARC-209ENST00000539687 PSTPIP2Q9H939 334 aa11.48□□□□□ -0.57
SPARC-209ENST00000539687 ZNF277Q9NRM2 450 aaPredicted RBP11.48□□□□□ -0.57
SPARC-209ENST00000539687 SPTLC3Q9NUV7 552 aa11.48□□□□□ -0.57
SPARC-209ENST00000539687 STK17AQ9UEE5 414 aa11.48□□□□□ -0.57
SPARC-209ENST00000539687 PNMA2Q9UL42 364 aa11.48□□□□□ -0.57
SPARC-209ENST00000539687 SIPA1L1O43166 1804 aa11.48□□□□□ -0.57
SPARC-209ENST00000539687 MYH4Q9Y623 1939 aa11.48□□□□□ -0.57
SPARC-209ENST00000539687 SYNRGQ9UMZ2 1314 aa11.47□□□□□ -0.57
SPARC-209ENST00000539687 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.47□□□□□ -0.57
SPARC-209ENST00000539687 PLA2G6O60733 806 aa11.47□□□□□ -0.57
SPARC-209ENST00000539687 RAD17O75943 681 aa11.47□□□□□ -0.57
SPARC-209ENST00000539687 CDK11BP21127 795 aaKnown RBP11.47□□□□□ -0.57
SPARC-209ENST00000539687 PTGS1P23219 599 aa11.47□□□□□ -0.57
SPARC-209ENST00000539687 KCNJ6P48051 423 aa11.47□□□□□ -0.57
SPARC-209ENST00000539687 UBASH3AP57075 661 aa11.47□□□□□ -0.57
SPARC-209ENST00000539687 NOLC1Q14978 699 aaKnown RBP eCLIP11.47□□□□□ -0.57
SPARC-209ENST00000539687 CDC37Q16543 378 aaPredicted RBP11.47□□□□□ -0.57
SPARC-209ENST00000539687 FILIP1LQ4L180 1135 aa11.47□□□□□ -0.57
SPARC-209ENST00000539687 NOM1Q5C9Z4 860 aaKnown RBP11.47□□□□□ -0.57
SPARC-209ENST00000539687 ZNF658Q5TYW1 1059 aaPredicted RBP11.47□□□□□ -0.57
SPARC-209ENST00000539687 SYDE2Q5VT97 1194 aa11.47□□□□□ -0.57
SPARC-209ENST00000539687 SPATA1Q5VX52 437 aa11.47□□□□□ -0.57
SPARC-209ENST00000539687 JAKMIP3Q5VZ66 844 aa11.47□□□□□ -0.57
SPARC-209ENST00000539687 USP49Q70CQ1 688 aa11.47□□□□□ -0.57
SPARC-209ENST00000539687 FAM160B2Q86V87 743 aa11.47□□□□□ -0.57
SPARC-209ENST00000539687 KIAA1524Q8TCG1 905 aa11.47□□□□□ -0.57
SPARC-209ENST00000539687 EHMT1Q9H9B1 1298 aa11.47□□□□□ -0.57
SPARC-209ENST00000539687 IFNKQ9P0W0 207 aa11.47□□□□□ -0.57
SPARC-209ENST00000539687 BIN2Q9UBW5 565 aaPredicted RBP11.47□□□□□ -0.57
SPARC-209ENST00000539687 KDM3AQ9Y4C1 1321 aa11.46□□□□□ -0.57
SPARC-209ENST00000539687 USP17L10C9JJH3 530 aa11.46□□□□□ -0.57
SPARC-209ENST00000539687 WNT7AO00755 349 aa11.46□□□□□ -0.57
SPARC-209ENST00000539687 MARCH6O60337 910 aa11.46□□□□□ -0.57
SPARC-209ENST00000539687 NDUFB10O96000 172 aa11.46□□□□□ -0.57
SPARC-209ENST00000539687 GH2P01242 217 aa11.46□□□□□ -0.57
SPARC-209ENST00000539687 TUBB4AP04350 444 aa11.46□□□□□ -0.57
SPARC-209ENST00000539687 PRR29P0C7W0 189 aa11.46□□□□□ -0.57
SPARC-209ENST00000539687 LMOD1P29536 600 aaPredicted RBP11.46□□□□□ -0.57
SPARC-209ENST00000539687 AFMP43652 599 aa11.46□□□□□ -0.57
SPARC-209ENST00000539687 IL17AQ16552 155 aa11.46□□□□□ -0.57
SPARC-209ENST00000539687 QRICH1Q2TAL8 776 aa11.46□□□□□ -0.57
SPARC-209ENST00000539687 KCTD1Q719H9 257 aa11.46□□□□□ -0.57
SPARC-209ENST00000539687 FBXO11Q86XK2 927 aa11.46□□□□□ -0.57
SPARC-209ENST00000539687 KCTD17Q8N5Z5 321 aa11.46□□□□□ -0.57
SPARC-209ENST00000539687 NOC3LQ8WTT2 800 aaKnown RBP11.46□□□□□ -0.57
SPARC-209ENST00000539687 CHURC1Q8WUH1 139 aa11.46□□□□□ -0.57
SPARC-209ENST00000539687 CDK5RAP3Q96JB5 506 aa11.46□□□□□ -0.57
SPARC-209ENST00000539687 XPO4Q9C0E2 1151 aaKnown RBP11.46□□□□□ -0.57
SPARC-209ENST00000539687 CPVLQ9H3G5 476 aa11.46□□□□□ -0.57
SPARC-209ENST00000539687 TMX2Q9Y320 296 aa11.46□□□□□ -0.57
SPARC-209ENST00000539687 NFE2L3Q9Y4A8 694 aa11.46□□□□□ -0.57
SPARC-209ENST00000539687 PCDHA1Q9Y5I3 950 aa11.46□□□□□ -0.57
SPARC-209ENST00000539687 ARFGEF1Q9Y6D6 1849 aa11.45□□□□□ -0.58
SPARC-209ENST00000539687 A0A087X0B3 334 aa11.45□□□□□ -0.58
SPARC-209ENST00000539687 TCP10L2B9ZVM9 353 aa11.45□□□□□ -0.58
SPARC-209ENST00000539687 TBX3O15119 743 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms