RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 CCNI2Q6ZMN8 369 aaPredicted RBP10.81□□□□□ -0.68
CDH13-204ENST00000539548 FAM114A1Q8IWE2 563 aa10.81□□□□□ -0.68
CDH13-204ENST00000539548 CSGALNACT2Q8N6G5 542 aa10.81□□□□□ -0.68
CDH13-204ENST00000539548 RASSF8Q8NHQ8 419 aa10.81□□□□□ -0.68
CDH13-204ENST00000539548 P2RX5Q93086 422 aa10.81□□□□□ -0.68
CDH13-204ENST00000539548 CCDC47Q96A33 483 aaKnown RBP10.81□□□□□ -0.68
CDH13-204ENST00000539548 IQCDQ96DY2 449 aa10.81□□□□□ -0.68
CDH13-204ENST00000539548 KAT14Q9H8E8 782 aa10.81□□□□□ -0.68
CDH13-204ENST00000539548 TFR2Q9UP52 801 aa10.81□□□□□ -0.68
CDH13-204ENST00000539548 COL14A1Q05707 1796 aaKnown RBP10.8□□□□□ -0.68
CDH13-204ENST00000539548 CASZ1Q86V15 1759 aa10.8□□□□□ -0.68
CDH13-204ENST00000539548 CYP2D6P10635 497 aa10.8□□□□□ -0.68
CDH13-204ENST00000539548 TRIM21P19474 475 aaKnown RBP10.8□□□□□ -0.68
CDH13-204ENST00000539548 TNNT3P45378 269 aaPredicted RBP10.8□□□□□ -0.68
CDH13-204ENST00000539548 GRM4Q14833 912 aa10.8□□□□□ -0.68
CDH13-204ENST00000539548 ZSCAN29Q8IWY8 852 aaPredicted RBP10.8□□□□□ -0.68
CDH13-204ENST00000539548 C10orf67Q8IYJ2 551 aa10.8□□□□□ -0.68
CDH13-204ENST00000539548 RASGRP4Q8TDF6 673 aa10.8□□□□□ -0.68
CDH13-204ENST00000539548 AFAP1L1Q8TED9 768 aa10.8□□□□□ -0.68
CDH13-204ENST00000539548 GPKOWQ92917 476 aaPredicted RBP eCLIP10.8□□□□□ -0.68
CDH13-204ENST00000539548 AK8Q96MA6 479 aa10.8□□□□□ -0.68
CDH13-204ENST00000539548 ERGIC2Q96RQ1 377 aa10.8□□□□□ -0.68
CDH13-204ENST00000539548 CCDC88AQ3V6T2 1871 aa10.8□□□□□ -0.68
CDH13-204ENST00000539548 PDE2AO00408 941 aaPredicted RBP10.8□□□□□ -0.68
CDH13-204ENST00000539548 TRIM66O15016 1216 aa10.8□□□□□ -0.68
CDH13-204ENST00000539548 VAV2P52735 878 aa10.8□□□□□ -0.68
CDH13-204ENST00000539548 COBLL1Q53SF7 1204 aa10.8□□□□□ -0.68
CDH13-204ENST00000539548 CCDC178Q5BJE1 867 aa10.8□□□□□ -0.68
CDH13-204ENST00000539548 ANKRD40Q6AI12 368 aa10.8□□□□□ -0.68
CDH13-204ENST00000539548 IQCEQ6IPM2 695 aa10.8□□□□□ -0.68
CDH13-204ENST00000539548 TYW1BQ6NUM6 668 aa10.8□□□□□ -0.68
CDH13-204ENST00000539548 ZBTB9Q96C00 473 aa10.8□□□□□ -0.68
CDH13-204ENST00000539548 CAPZA3Q96KX2 299 aa10.8□□□□□ -0.68
CDH13-204ENST00000539548 C7orf25Q9BPX7 421 aa10.8□□□□□ -0.68
CDH13-204ENST00000539548 TSGA10Q9BZW7 698 aa10.8□□□□□ -0.68
CDH13-204ENST00000539548 IL17RBQ9NRM6 502 aa10.8□□□□□ -0.68
CDH13-204ENST00000539548 ZNF652Q9Y2D9 606 aa10.8□□□□□ -0.68
CDH13-204ENST00000539548 PRLRP16471 622 aa10.79□□□□□ -0.68
CDH13-204ENST00000539548 HNRNPH3P31942 346 aaKnown RBP10.79□□□□□ -0.68
CDH13-204ENST00000539548 TFAP4Q01664 338 aa10.79□□□□□ -0.68
CDH13-204ENST00000539548 ITIH3Q06033 890 aa10.79□□□□□ -0.68
CDH13-204ENST00000539548 KIF5AQ12840 1032 aa10.79□□□□□ -0.68
CDH13-204ENST00000539548 INF2Q27J81 1249 aa10.79□□□□□ -0.68
CDH13-204ENST00000539548 ERFEQ4G0M1 354 aa10.79□□□□□ -0.68
CDH13-204ENST00000539548 MIIPQ5JXC2 388 aa10.79□□□□□ -0.68
CDH13-204ENST00000539548 FOXR1Q6PIV2 292 aa10.79□□□□□ -0.68
CDH13-204ENST00000539548 CLEC4GQ6UXB4 293 aa10.79□□□□□ -0.68
CDH13-204ENST00000539548 C3orf67Q6ZVT6 689 aa10.79□□□□□ -0.68
CDH13-204ENST00000539548 ZNF572Q7Z3I7 529 aaPredicted RBP10.79□□□□□ -0.68
CDH13-204ENST00000539548 STAG2Q8N3U4 1231 aa10.79□□□□□ -0.68
CDH13-204ENST00000539548 FNBP4Q8N3X1 1017 aaPredicted RBP10.79□□□□□ -0.68
CDH13-204ENST00000539548 MMGT1Q8N4V1 131 aa10.79□□□□□ -0.68
CDH13-204ENST00000539548 PNMA1Q8ND90 353 aa10.79□□□□□ -0.68
CDH13-204ENST00000539548 LRRC15Q8TF66 581 aa10.79□□□□□ -0.68
CDH13-204ENST00000539548 RUBCNQ92622 972 aa10.79□□□□□ -0.68
CDH13-204ENST00000539548 CNOT6LQ96LI5 555 aaKnown RBP10.79□□□□□ -0.68
CDH13-204ENST00000539548 TRIM34Q9BYJ4 488 aa10.79□□□□□ -0.68
CDH13-204ENST00000539548 MAD2L2Q9UI95 211 aa10.79□□□□□ -0.68
CDH13-204ENST00000539548 WNK3Q9BYP7 1800 aa10.79□□□□□ -0.68
CDH13-204ENST00000539548 MAST2Q6P0Q8 1798 aa10.79□□□□□ -0.68
CDH13-204ENST00000539548 LOC102724428A0A0B4J2F2 783 aa10.79□□□□□ -0.68
CDH13-204ENST00000539548 NUTM2BA6NNL0 878 aaPredicted RBP10.79□□□□□ -0.68
CDH13-204ENST00000539548 NUTM2EB1AL46 878 aaPredicted RBP10.79□□□□□ -0.68
CDH13-204ENST00000539548 PPFIA4O75335 1185 aa10.79□□□□□ -0.68
CDH13-204ENST00000539548 IDEP14735 1019 aa10.79□□□□□ -0.68
CDH13-204ENST00000539548 MTIF2P46199 727 aaKnown RBP10.79□□□□□ -0.68
CDH13-204ENST00000539548 KLK7P49862 253 aa10.79□□□□□ -0.68
CDH13-204ENST00000539548 SIK1P57059 783 aa10.79□□□□□ -0.68
CDH13-204ENST00000539548 PDE4DQ08499 809 aa10.79□□□□□ -0.68
CDH13-204ENST00000539548 ITPK1Q13572 414 aa10.79□□□□□ -0.68
CDH13-204ENST00000539548 CCDC70Q6NSX1 233 aa10.79□□□□□ -0.68
CDH13-204ENST00000539548 POTEAQ6S8J7 498 aa10.79□□□□□ -0.68
CDH13-204ENST00000539548 CABP7Q86V35 215 aa10.79□□□□□ -0.68
CDH13-204ENST00000539548 CAGE1Q8TC20 777 aa10.79□□□□□ -0.68
CDH13-204ENST00000539548 PLIN2Q99541 437 aa10.79□□□□□ -0.68
CDH13-204ENST00000539548 NOC4LQ9BVI4 516 aaKnown RBP10.79□□□□□ -0.68
CDH13-204ENST00000539548 TRIM9Q9C026 710 aa10.79□□□□□ -0.68
CDH13-204ENST00000539548 RNF216Q9NWF9 866 aaPredicted RBP10.79□□□□□ -0.68
CDH13-204ENST00000539548 BARHL2Q9NY43 387 aa10.79□□□□□ -0.68
CDH13-204ENST00000539548 JRKLQ9Y4A0 524 aa10.79□□□□□ -0.68
CDH13-204ENST00000539548 FLT1P17948 1338 aa10.79□□□□□ -0.68
CDH13-204ENST00000539548 STXBP3O00186 592 aa10.78□□□□□ -0.68
CDH13-204ENST00000539548 ZNF185O15231 689 aa10.78□□□□□ -0.68
CDH13-204ENST00000539548 PLCG1P19174 1290 aa10.78□□□□□ -0.68
CDH13-204ENST00000539548 SPA17Q15506 151 aa10.78□□□□□ -0.68
CDH13-204ENST00000539548 SLC35G1Q2M3R5 365 aa10.78□□□□□ -0.68
CDH13-204ENST00000539548 FKBP15Q5T1M5 1219 aa10.78□□□□□ -0.68
CDH13-204ENST00000539548 C12orf60Q5U649 245 aa10.78□□□□□ -0.68
CDH13-204ENST00000539548 AMOTL1Q8IY63 956 aa10.78□□□□□ -0.68
CDH13-204ENST00000539548 TRIM58Q8NG06 486 aa10.78□□□□□ -0.68
CDH13-204ENST00000539548 AENQ8WTP8 325 aaKnown RBP10.78□□□□□ -0.68
CDH13-204ENST00000539548 SECISBP2LQ93073 1101 aaKnown RBP10.78□□□□□ -0.68
CDH13-204ENST00000539548 CCDC42Q96M95 316 aa10.78□□□□□ -0.68
CDH13-204ENST00000539548 CRACR2AQ9BSW2 395 aa10.78□□□□□ -0.68
CDH13-204ENST00000539548 SELENOOQ9BVL4 669 aa10.78□□□□□ -0.68
CDH13-204ENST00000539548 TCP11L1Q9NUJ3 509 aa10.78□□□□□ -0.68
CDH13-204ENST00000539548 SNX12Q9UMY4 172 aa10.78□□□□□ -0.68
CDH13-204ENST00000539548 DUSP10Q9Y6W6 482 aa10.78□□□□□ -0.68
CDH13-204ENST00000539548 ROBO1Q9Y6N7 1651 aa10.78□□□□□ -0.68
CDH13-204ENST00000539548 AGPSO00116 658 aa10.77□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms