RNA–Protein interactions for RNA: ENST00000539417.6

RPAIN-206, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-206ENST00000539417 MAP3K14Q99558 947 aa18.33■□□□□ 0.53
RPAIN-206ENST00000539417 AGXT2Q9BYV1 514 aa18.33■□□□□ 0.53
RPAIN-206ENST00000539417 FAM217BQ9NTX9 383 aaPredicted RBP18.33■□□□□ 0.53
RPAIN-206ENST00000539417 CCL5P13501 91 aa18.33■□□□□ 0.52
RPAIN-206ENST00000539417 PSMA5P28066 241 aa18.33■□□□□ 0.52
RPAIN-206ENST00000539417 CACNB2Q08289 660 aaPredicted RBP18.33■□□□□ 0.52
RPAIN-206ENST00000539417 TKFCQ3LXA3 575 aa18.33■□□□□ 0.52
RPAIN-206ENST00000539417 ANKRD35Q8N283 1001 aa18.33■□□□□ 0.52
RPAIN-206ENST00000539417 FANCBQ8NB91 859 aa18.33■□□□□ 0.52
RPAIN-206ENST00000539417 TRPV1Q8NER1 839 aa18.33■□□□□ 0.52
RPAIN-206ENST00000539417 CTCFLQ8NI51 663 aaPredicted RBP18.33■□□□□ 0.52
RPAIN-206ENST00000539417 TM6SF1Q9BZW5 370 aa18.33■□□□□ 0.52
RPAIN-206ENST00000539417 ASTN1O14525 1302 aa18.32■□□□□ 0.52
RPAIN-206ENST00000539417 MYH6P13533 1939 aa18.32■□□□□ 0.52
RPAIN-206ENST00000539417 MKI67P46013 3256 aaKnown RBP18.32■□□□□ 0.52
RPAIN-206ENST00000539417 hCG_1642624A0A1W2PR95 340 aa18.32■□□□□ 0.52
RPAIN-206ENST00000539417 PRKAR2AP13861 404 aaKnown RBP18.32■□□□□ 0.52
RPAIN-206ENST00000539417 CDC27P30260 824 aa18.32■□□□□ 0.52
RPAIN-206ENST00000539417 PRAMEF19Q5SWL8 479 aa18.32■□□□□ 0.52
RPAIN-206ENST00000539417 MAP3K21Q5TCX8 1036 aa18.32■□□□□ 0.52
RPAIN-206ENST00000539417 CCDC82Q8N4S0 544 aa18.32■□□□□ 0.52
RPAIN-206ENST00000539417 DDX11Q96FC9 970 aa18.32■□□□□ 0.52
RPAIN-206ENST00000539417 FBXO40Q9UH90 709 aa18.32■□□□□ 0.52
RPAIN-206ENST00000539417 SOWAHBA6NEL2 793 aa18.31■□□□□ 0.52
RPAIN-206ENST00000539417 OPLAHO14841 1288 aa18.31■□□□□ 0.52
RPAIN-206ENST00000539417 ZBTB43O43298 467 aa18.31■□□□□ 0.52
RPAIN-206ENST00000539417 CCND3P30281 292 aaPredicted RBP18.31■□□□□ 0.52
RPAIN-206ENST00000539417 FGD1P98174 961 aa18.31■□□□□ 0.52
RPAIN-206ENST00000539417 NSMFQ6X4W1 530 aa18.31■□□□□ 0.52
RPAIN-206ENST00000539417 SLC30A10Q6XR72 485 aa18.31■□□□□ 0.52
RPAIN-206ENST00000539417 TMTC3Q6ZXV5 915 aa18.31■□□□□ 0.52
RPAIN-206ENST00000539417 CYP39A1Q9NYL5 469 aa18.31■□□□□ 0.52
RPAIN-206ENST00000539417 NAP1L2Q9ULW6 460 aaPredicted RBP18.31■□□□□ 0.52
RPAIN-206ENST00000539417 CYP46A1Q9Y6A2 500 aa18.31■□□□□ 0.52
RPAIN-206ENST00000539417 ZBTB5O15062 677 aa18.3■□□□□ 0.52
RPAIN-206ENST00000539417 CALM1P0DP23 149 aa18.3■□□□□ 0.52
RPAIN-206ENST00000539417 CALM2P0DP24 149 aa18.3■□□□□ 0.52
RPAIN-206ENST00000539417 CALM3P0DP25 149 aa18.3■□□□□ 0.52
RPAIN-206ENST00000539417 UBXN2AP68543 259 aa18.3■□□□□ 0.52
RPAIN-206ENST00000539417 BAATQ14032 418 aaPredicted RBP18.3■□□□□ 0.52
RPAIN-206ENST00000539417 IFFO2Q5TF58 517 aa18.3■□□□□ 0.52
RPAIN-206ENST00000539417 FBXO11Q86XK2 927 aa18.3■□□□□ 0.52
RPAIN-206ENST00000539417 FBXL16Q8N461 479 aa18.3■□□□□ 0.52
RPAIN-206ENST00000539417 FAM133AQ8N9E0 248 aa18.3■□□□□ 0.52
RPAIN-206ENST00000539417 IL17RAQ96F46 866 aa18.3■□□□□ 0.52
RPAIN-206ENST00000539417 RNF208Q9H0X6 261 aa18.3■□□□□ 0.52
RPAIN-206ENST00000539417 GOLGA8AA7E2F4 631 aa18.29■□□□□ 0.52
RPAIN-206ENST00000539417 GOLGA8BA8MQT2 603 aa18.29■□□□□ 0.52
RPAIN-206ENST00000539417 EN2P19622 333 aaPredicted RBP18.29■□□□□ 0.52
RPAIN-206ENST00000539417 KIF5BP33176 963 aa18.29■□□□□ 0.52
RPAIN-206ENST00000539417 ADD1P35611 737 aaKnown RBP18.29■□□□□ 0.52
RPAIN-206ENST00000539417 ANAPC15P60006 121 aa18.29■□□□□ 0.52
RPAIN-206ENST00000539417 FUT2Q10981 343 aa18.29■□□□□ 0.52
RPAIN-206ENST00000539417 OLFML2BQ68BL8 750 aa18.29■□□□□ 0.52
RPAIN-206ENST00000539417 SPZ1Q9BXG8 430 aa18.29■□□□□ 0.52
RPAIN-206ENST00000539417 PDRG1Q9NUG6 133 aa18.29■□□□□ 0.52
RPAIN-206ENST00000539417 RBBP6Q7Z6E9 1792 aaKnown RBP18.29■□□□□ 0.52
RPAIN-206ENST00000539417 RTN1Q16799 776 aa18.28■□□□□ 0.52
RPAIN-206ENST00000539417 SYNE3Q6ZMZ3 975 aa18.28■□□□□ 0.52
RPAIN-206ENST00000539417 TRMT44Q8IYL2 757 aaKnown RBP18.28■□□□□ 0.52
RPAIN-206ENST00000539417 KIF2CQ99661 725 aa18.28■□□□□ 0.52
RPAIN-206ENST00000539417 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.28■□□□□ 0.52
RPAIN-206ENST00000539417 PAK6Q9NQU5 681 aaPredicted RBP18.28■□□□□ 0.52
RPAIN-206ENST00000539417 DIS3Q9Y2L1 958 aaKnown RBP18.28■□□□□ 0.52
RPAIN-206ENST00000539417 MCM3APO60318 1980 aa18.28■□□□□ 0.52
RPAIN-206ENST00000539417 ABCB11O95342 1321 aa18.27■□□□□ 0.52
RPAIN-206ENST00000539417 CNTNAP5Q8WYK1 1306 aa18.27■□□□□ 0.52
RPAIN-206ENST00000539417 POTEB2H3BUK9 544 aa18.27■□□□□ 0.52
RPAIN-206ENST00000539417 PDIA3P30101 505 aaKnown RBP18.27■□□□□ 0.52
RPAIN-206ENST00000539417 EVCP57679 992 aa18.27■□□□□ 0.52
RPAIN-206ENST00000539417 SHISA4Q96DD7 197 aa18.27■□□□□ 0.52
RPAIN-206ENST00000539417 DEFB118Q96PH6 123 aa18.27■□□□□ 0.52
RPAIN-206ENST00000539417 TINF2Q9BSI4 451 aa18.27■□□□□ 0.52
RPAIN-206ENST00000539417 AMNQ9BXJ7 453 aa18.27■□□□□ 0.52
RPAIN-206ENST00000539417 NCOA5Q9HCD5 579 aaKnown RBP18.27■□□□□ 0.52
RPAIN-206ENST00000539417 COL20A1Q9P218 1284 aa18.27■□□□□ 0.52
RPAIN-206ENST00000539417 RPTORQ8N122 1335 aa18.27■□□□□ 0.51
RPAIN-206ENST00000539417 PNMA6FA0A0J9YX94 578 aa18.26■□□□□ 0.51
RPAIN-206ENST00000539417 PTPDC1A2A3K4 754 aa18.26■□□□□ 0.51
RPAIN-206ENST00000539417 DTNBO60941 627 aa18.26■□□□□ 0.51
RPAIN-206ENST00000539417 PPFIA3O75145 1194 aa18.26■□□□□ 0.51
RPAIN-206ENST00000539417 SNAI1O95863 264 aaPredicted RBP18.26■□□□□ 0.51
RPAIN-206ENST00000539417 CYBAP13498 195 aa18.26■□□□□ 0.51
RPAIN-206ENST00000539417 CALML3P27482 149 aa18.26■□□□□ 0.51
RPAIN-206ENST00000539417 RPS6P62753 249 aaKnown RBP18.26■□□□□ 0.51
RPAIN-206ENST00000539417 CCT2P78371 535 aaKnown RBP18.26■□□□□ 0.51
RPAIN-206ENST00000539417 MFSD14CQ5VZR4 134 aa18.26■□□□□ 0.51
RPAIN-206ENST00000539417 HMX1Q9NP08 348 aaPredicted RBP18.26■□□□□ 0.51
RPAIN-206ENST00000539417 SLC5A4Q9NY91 659 aa18.26■□□□□ 0.51
RPAIN-206ENST00000539417 PCDHA1Q9Y5I3 950 aa18.26■□□□□ 0.51
RPAIN-206ENST00000539417 KIAA0100Q14667 2235 aaKnown RBP18.26■□□□□ 0.51
RPAIN-206ENST00000539417 NID2Q14112 1375 aa18.26■□□□□ 0.51
RPAIN-206ENST00000539417 PFASO15067 1338 aa18.26■□□□□ 0.51
RPAIN-206ENST00000539417 SMARCA1P28370 1054 aa18.26■□□□□ 0.51
RPAIN-206ENST00000539417 GNAQP50148 359 aa18.26■□□□□ 0.51
RPAIN-206ENST00000539417 METAP2P50579 478 aaKnown RBP eCLIP18.26■□□□□ 0.51
RPAIN-206ENST00000539417 RNF207Q6ZRF8 634 aa18.26■□□□□ 0.51
RPAIN-206ENST00000539417 LZTS2Q9BRK4 669 aa18.26■□□□□ 0.51
RPAIN-206ENST00000539417 TMEM106CQ9BVX2 250 aa18.26■□□□□ 0.51
RPAIN-206ENST00000539417 GJB1P08034 283 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms