RNA–Protein interactions for RNA: ENST00000539276.6

ATP2A2-204, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene ATP2A2, Length 4,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A2-204ENST00000539276 CCT5P48643 541 aa17.45■□□□□ 0.38
ATP2A2-204ENST00000539276 USP17L2Q6R6M4 530 aa17.45■□□□□ 0.38
ATP2A2-204ENST00000539276 SLF2Q8IX21 1173 aa17.45■□□□□ 0.38
ATP2A2-204ENST00000539276 PPP1R3GB7ZBB8 358 aa17.45■□□□□ 0.38
ATP2A2-204ENST00000539276 PCP11498 1178 aaKnown RBP17.45■□□□□ 0.38
ATP2A2-204ENST00000539276 PFKFB3Q16875 520 aaPredicted RBP17.45■□□□□ 0.38
ATP2A2-204ENST00000539276 KRT26Q7Z3Y9 468 aa17.45■□□□□ 0.38
ATP2A2-204ENST00000539276 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.45■□□□□ 0.38
ATP2A2-204ENST00000539276 WDR66Q8TBY9 1149 aa17.44■□□□□ 0.38
ATP2A2-204ENST00000539276 DCP1AQ9NPI6 582 aaPredicted RBP17.44■□□□□ 0.38
ATP2A2-204ENST00000539276 ZBED6P86452 979 aa17.44■□□□□ 0.38
ATP2A2-204ENST00000539276 SMIM5Q71RC9 77 aa17.44■□□□□ 0.38
ATP2A2-204ENST00000539276 CELF1Q92879 486 aaKnown RBP17.44■□□□□ 0.38
ATP2A2-204ENST00000539276 CCNE1P24864 410 aa17.44■□□□□ 0.38
ATP2A2-204ENST00000539276 CFAP221Q4G0U5 840 aa17.44■□□□□ 0.38
ATP2A2-204ENST00000539276 ARL6IP4Q66PJ3 421 aaKnown RBP17.44■□□□□ 0.38
ATP2A2-204ENST00000539276 MICALCLQ6ZW33 695 aa17.44■□□□□ 0.38
ATP2A2-204ENST00000539276 STAG2Q8N3U4 1231 aa17.44■□□□□ 0.38
ATP2A2-204ENST00000539276 SMCR8Q8TEV9 937 aaPredicted RBP17.44■□□□□ 0.38
ATP2A2-204ENST00000539276 RIN2Q8WYP3 895 aaPredicted RBP17.44■□□□□ 0.38
ATP2A2-204ENST00000539276 HPS3Q969F9 1004 aa17.44■□□□□ 0.38
ATP2A2-204ENST00000539276 DHTKD1Q96HY7 919 aaPredicted RBP17.44■□□□□ 0.38
ATP2A2-204ENST00000539276 NGLY1Q96IV0 654 aa17.44■□□□□ 0.38
ATP2A2-204ENST00000539276 BRIP1Q9BX63 1249 aa17.44■□□□□ 0.38
ATP2A2-204ENST00000539276 HYOU1Q9Y4L1 999 aa17.44■□□□□ 0.38
ATP2A2-204ENST00000539276 ARHGAP23Q9P227 1491 aa17.44■□□□□ 0.38
ATP2A2-204ENST00000539276 A0A087X0B3 334 aa17.43■□□□□ 0.38
ATP2A2-204ENST00000539276 TRIM66O15016 1216 aa17.43■□□□□ 0.38
ATP2A2-204ENST00000539276 RIMBP2O15034 1052 aa17.43■□□□□ 0.38
ATP2A2-204ENST00000539276 KLHL30Q0D2K2 578 aa17.43■□□□□ 0.38
ATP2A2-204ENST00000539276 GOLGA6L7A0A1B0GV03 622 aa17.43■□□□□ 0.38
ATP2A2-204ENST00000539276 EIF4A3P38919 411 aaKnown RBP17.43■□□□□ 0.38
ATP2A2-204ENST00000539276 LIG3P49916 1009 aa17.43■□□□□ 0.38
ATP2A2-204ENST00000539276 ERVK-24P63145 666 aa17.43■□□□□ 0.38
ATP2A2-204ENST00000539276 PPFIA1Q13136 1202 aa17.43■□□□□ 0.38
ATP2A2-204ENST00000539276 LRRC47Q8N1G4 583 aaKnown RBP17.43■□□□□ 0.38
ATP2A2-204ENST00000539276 TBCKQ8TEA7 893 aa17.43■□□□□ 0.38
ATP2A2-204ENST00000539276 AGPAT5Q9NUQ2 364 aa17.43■□□□□ 0.38
ATP2A2-204ENST00000539276 UFL1O94874 794 aa17.43■□□□□ 0.38
ATP2A2-204ENST00000539276 IFT20Q8IY31 132 aa17.43■□□□□ 0.38
ATP2A2-204ENST00000539276 NKX2-3Q8TAU0 364 aa17.43■□□□□ 0.38
ATP2A2-204ENST00000539276 IPO4Q8TEX9 1081 aaKnown RBP17.43■□□□□ 0.38
ATP2A2-204ENST00000539276 MMS19Q96T76 1030 aa17.43■□□□□ 0.38
ATP2A2-204ENST00000539276 NWD1Q149M9 1564 aa17.43■□□□□ 0.38
ATP2A2-204ENST00000539276 ZNF185O15231 689 aa17.42■□□□□ 0.38
ATP2A2-204ENST00000539276 CEP104O60308 925 aa17.42■□□□□ 0.38
ATP2A2-204ENST00000539276 TBCAO75347 108 aaKnown RBP17.42■□□□□ 0.38
ATP2A2-204ENST00000539276 POLR2FP61218 127 aaKnown RBP17.42■□□□□ 0.38
ATP2A2-204ENST00000539276 SFMBT2Q5VUG0 894 aa17.42■□□□□ 0.38
ATP2A2-204ENST00000539276 CCDC65Q8IXS2 484 aa17.42■□□□□ 0.38
ATP2A2-204ENST00000539276 TRIM31Q9BZY9 425 aa17.42■□□□□ 0.38
ATP2A2-204ENST00000539276 RTCBQ9Y3I0 505 aaKnown RBP17.42■□□□□ 0.38
ATP2A2-204ENST00000539276 TCRBV5S4A2TA0A5A2 114 aa17.42■□□□□ 0.38
ATP2A2-204ENST00000539276 ADCY7P51828 1080 aa17.42■□□□□ 0.38
ATP2A2-204ENST00000539276 RCAN1P53805 252 aa17.42■□□□□ 0.38
ATP2A2-204ENST00000539276 TNNC1P63316 161 aa17.42■□□□□ 0.38
ATP2A2-204ENST00000539276 SF3A3Q12874 501 aaKnown RBP eCLIP17.42■□□□□ 0.383e-7■■□□□ 13.8
ATP2A2-204ENST00000539276 SELENOOQ9BVL4 669 aa17.42■□□□□ 0.38
ATP2A2-204ENST00000539276 THAP9Q9H5L6 903 aa17.42■□□□□ 0.38
ATP2A2-204ENST00000539276 MINPP1Q9UNW1 487 aa17.42■□□□□ 0.38
ATP2A2-204ENST00000539276 FMN2Q9NZ56 1722 aa17.42■□□□□ 0.38
ATP2A2-204ENST00000539276 ZNF804BA4D1E1 1349 aa17.42■□□□□ 0.38
ATP2A2-204ENST00000539276 SMIM23A6NLE4 172 aa17.42■□□□□ 0.38
ATP2A2-204ENST00000539276 TCP1P17987 556 aaKnown RBP17.42■□□□□ 0.38
ATP2A2-204ENST00000539276 LSM14BQ9BX40 385 aaKnown RBP17.42■□□□□ 0.38
ATP2A2-204ENST00000539276 KCND1Q9NSA2 647 aa17.42■□□□□ 0.38
ATP2A2-204ENST00000539276 LIMA1Q9UHB6 759 aaKnown RBP17.42■□□□□ 0.38
ATP2A2-204ENST00000539276 H3BQF6 201 aa17.42■□□□□ 0.38
ATP2A2-204ENST00000539276 CACNB1Q02641 598 aaPredicted RBP17.42■□□□□ 0.38
ATP2A2-204ENST00000539276 TBX2Q13207 712 aaPredicted RBP17.42■□□□□ 0.38
ATP2A2-204ENST00000539276 PPM1EQ8WY54 764 aa17.42■□□□□ 0.38
ATP2A2-204ENST00000539276 MTA3Q9BTC8 594 aa17.42■□□□□ 0.38
ATP2A2-204ENST00000539276 UBLCP1Q8WVY7 318 aaPredicted RBP17.41■□□□□ 0.38
ATP2A2-204ENST00000539276 CAPS2Q9BXY5 557 aa17.41■□□□□ 0.38
ATP2A2-204ENST00000539276 XDHP47989 1333 aa17.41■□□□□ 0.38
ATP2A2-204ENST00000539276 TLDC2A0PJX2 215 aa17.41■□□□□ 0.38
ATP2A2-204ENST00000539276 ZRANB2O95218 330 aaKnown RBP eCLIP17.41■□□□□ 0.383e-7■■■■■ 39.4
ATP2A2-204ENST00000539276 GUCY2DQ02846 1103 aa17.41■□□□□ 0.38
ATP2A2-204ENST00000539276 TROAPQ12815 778 aa17.41■□□□□ 0.38
ATP2A2-204ENST00000539276 TXNRD1Q16881 649 aa17.41■□□□□ 0.38
ATP2A2-204ENST00000539276 MLXIPQ9HAP2 919 aa17.41■□□□□ 0.38
ATP2A2-204ENST00000539276 ZNF219Q9P2Y4 722 aaPredicted RBP17.41■□□□□ 0.38
ATP2A2-204ENST00000539276 FCER1AP12319 257 aa17.41■□□□□ 0.38
ATP2A2-204ENST00000539276 SARSP49591 514 aaKnown RBP17.41■□□□□ 0.38
ATP2A2-204ENST00000539276 EHHADHQ08426 723 aa17.41■□□□□ 0.38
ATP2A2-204ENST00000539276 IFI16Q16666 785 aaKnown RBP17.41■□□□□ 0.38
ATP2A2-204ENST00000539276 MYOCDQ8IZQ8 938 aa17.41■□□□□ 0.38
ATP2A2-204ENST00000539276 KIF11P52732 1056 aa17.4■□□□□ 0.38
ATP2A2-204ENST00000539276 MRPL12P52815 198 aaKnown RBP17.4■□□□□ 0.38
ATP2A2-204ENST00000539276 MDM2Q00987 491 aaPredicted RBP17.4■□□□□ 0.38
ATP2A2-204ENST00000539276 RSRC2Q7L4I2 434 aaKnown RBP17.4■□□□□ 0.38
ATP2A2-204ENST00000539276 ADGRA1Q86SQ6 560 aa17.4■□□□□ 0.38
ATP2A2-204ENST00000539276 FAM84BQ96KN1 310 aaPredicted RBP17.4■□□□□ 0.38
ATP2A2-204ENST00000539276 GPR101Q96P66 508 aaPredicted RBP17.4■□□□□ 0.38
ATP2A2-204ENST00000539276 PIGSQ96S52 555 aa17.4■□□□□ 0.38
ATP2A2-204ENST00000539276 SAMM50Q9Y512 469 aa17.4■□□□□ 0.38
ATP2A2-204ENST00000539276 CETN3O15182 167 aa17.4■□□□□ 0.38
ATP2A2-204ENST00000539276 INPP5BP32019 993 aa17.4■□□□□ 0.38
ATP2A2-204ENST00000539276 GGCXP38435 758 aa17.4■□□□□ 0.38
ATP2A2-204ENST00000539276 KIAA0753Q2KHM9 967 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms