RNA–Protein interactions for RNA: ENST00000539232.1

LMO3-220, Transcript of LIM domain only 3, humanhuman

TSL 5

Gene LMO3, Length 580 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-220ENST00000539232 SNHG28P0DPA3 235 aa8.51□□□□□ -1.05
LMO3-220ENST00000539232 FCER1AP12319 257 aa8.51□□□□□ -1.05
LMO3-220ENST00000539232 ZNF543Q08ER8 600 aa8.51□□□□□ -1.05
LMO3-220ENST00000539232 SEC23AQ15436 765 aa8.51□□□□□ -1.05
LMO3-220ENST00000539232 IMMTQ16891 758 aaKnown RBP8.51□□□□□ -1.05
LMO3-220ENST00000539232 STAG2Q8N3U4 1231 aa8.51□□□□□ -1.05
LMO3-220ENST00000539232 ANKS1AQ92625 1134 aa8.51□□□□□ -1.05
LMO3-220ENST00000539232 MAP4K1Q92918 833 aa8.51□□□□□ -1.05
LMO3-220ENST00000539232 ZSCAN10Q96SZ4 725 aaPredicted RBP8.51□□□□□ -1.05
LMO3-220ENST00000539232 ESYT1Q9BSJ8 1104 aa8.51□□□□□ -1.05
LMO3-220ENST00000539232 TEX13BQ9BXU2 312 aa8.51□□□□□ -1.05
LMO3-220ENST00000539232 ZNF576Q9H609 170 aa8.51□□□□□ -1.05
LMO3-220ENST00000539232 SYNPO2Q9UMS6 1093 aa8.51□□□□□ -1.05
LMO3-220ENST00000539232 RBM8AQ9Y5S9 174 aaKnown RBP8.51□□□□□ -1.05
LMO3-220ENST00000539232 IVNS1ABPQ9Y6Y0 642 aa8.51□□□□□ -1.05
LMO3-220ENST00000539232 SOWAHBA6NEL2 793 aa8.5□□□□□ -1.05
LMO3-220ENST00000539232 E7EWF7 191 aa8.5□□□□□ -1.05
LMO3-220ENST00000539232 NFIBO00712 420 aa8.5□□□□□ -1.05
LMO3-220ENST00000539232 SLC25A27O95847 323 aa8.5□□□□□ -1.05
LMO3-220ENST00000539232 ZNF865P0CJ78 1059 aaPredicted RBP8.5□□□□□ -1.05
LMO3-220ENST00000539232 ALAS1P13196 640 aa8.5□□□□□ -1.05
LMO3-220ENST00000539232 DNAJB2P25686 324 aa8.5□□□□□ -1.05
LMO3-220ENST00000539232 MFAP1P55081 439 aaKnown RBP8.5□□□□□ -1.05
LMO3-220ENST00000539232 IKQ13123 557 aaPredicted RBP8.5□□□□□ -1.05
LMO3-220ENST00000539232 SYDE2Q5VT97 1194 aa8.5□□□□□ -1.05
LMO3-220ENST00000539232 MFSD14CQ5VZR4 134 aa8.5□□□□□ -1.05
LMO3-220ENST00000539232 BTNL9Q6UXG8 535 aa8.5□□□□□ -1.05
LMO3-220ENST00000539232 RASEFQ8IZ41 740 aa8.5□□□□□ -1.05
LMO3-220ENST00000539232 ABRAQ8N0Z2 381 aa8.5□□□□□ -1.05
LMO3-220ENST00000539232 DCAF4Q8WV16 495 aa8.5□□□□□ -1.05
LMO3-220ENST00000539232 CLEC4DQ8WXI8 215 aa8.5□□□□□ -1.05
LMO3-220ENST00000539232 TBC1D5Q92609 795 aa8.5□□□□□ -1.05
LMO3-220ENST00000539232 ESR2Q92731 530 aa8.5□□□□□ -1.05
LMO3-220ENST00000539232 CCDC136Q96JN2 1154 aa8.5□□□□□ -1.05
LMO3-220ENST00000539232 KCNH6Q9H252 994 aa8.5□□□□□ -1.05
LMO3-220ENST00000539232 RNF146Q9NTX7 359 aa8.5□□□□□ -1.05
LMO3-220ENST00000539232 TNKSO95271 1327 aa8.5□□□□□ -1.05
LMO3-220ENST00000539232 RAD50Q92878 1312 aa8.5□□□□□ -1.05
LMO3-220ENST00000539232 SPTBN4Q9H254 2564 aa8.5□□□□□ -1.05
LMO3-220ENST00000539232 ATAD5Q96QE3 1844 aa8.5□□□□□ -1.05
LMO3-220ENST00000539232 GREB1LQ9C091 1923 aaPredicted RBP8.49□□□□□ -1.05
LMO3-220ENST00000539232 FAM86C2PA6NEL3 165 aa8.49□□□□□ -1.05
LMO3-220ENST00000539232 PRR33A8MZF0 331 aa8.49□□□□□ -1.05
LMO3-220ENST00000539232 SLC27A2O14975 620 aa8.49□□□□□ -1.05
LMO3-220ENST00000539232 STRNO43815 780 aa8.49□□□□□ -1.05
LMO3-220ENST00000539232 ST18O60284 1047 aa8.49□□□□□ -1.05
LMO3-220ENST00000539232 PPP1R11O60927 126 aaPredicted RBP8.49□□□□□ -1.05
LMO3-220ENST00000539232 CNGA1P29973 690 aa8.49□□□□□ -1.05
LMO3-220ENST00000539232 ANP32AP39687 249 aaKnown RBP8.49□□□□□ -1.05
LMO3-220ENST00000539232 STAT2P52630 851 aa8.49□□□□□ -1.05
LMO3-220ENST00000539232 KCTD2Q14681 263 aa8.49□□□□□ -1.05
LMO3-220ENST00000539232 BMP2KLQ5H9B9 411 aa8.49□□□□□ -1.05
LMO3-220ENST00000539232 OLFML2BQ68BL8 750 aa8.49□□□□□ -1.05
LMO3-220ENST00000539232 FAM160B2Q86V87 743 aa8.49□□□□□ -1.05
LMO3-220ENST00000539232 DGKHQ86XP1 1220 aa8.49□□□□□ -1.05
LMO3-220ENST00000539232 RAB11FIP4Q86YS3 637 aa8.49□□□□□ -1.05
LMO3-220ENST00000539232 MB21D2Q8IYB1 491 aaPredicted RBP8.49□□□□□ -1.05
LMO3-220ENST00000539232 FAM133AQ8N9E0 248 aa8.49□□□□□ -1.05
LMO3-220ENST00000539232 PNMA1Q8ND90 353 aa8.49□□□□□ -1.05
LMO3-220ENST00000539232 CHURC1Q8WUH1 139 aa8.49□□□□□ -1.05
LMO3-220ENST00000539232 TRERF1Q96PN7 1200 aa8.49□□□□□ -1.05
LMO3-220ENST00000539232 MYL10Q9BUA6 226 aa8.49□□□□□ -1.05
LMO3-220ENST00000539232 LRRC2Q9BYS8 371 aa8.49□□□□□ -1.05
LMO3-220ENST00000539232 RANBP17Q9H2T7 1088 aaKnown RBP8.49□□□□□ -1.05
LMO3-220ENST00000539232 RNF41Q9H4P4 317 aaPredicted RBP8.49□□□□□ -1.05
LMO3-220ENST00000539232 A1CFQ9NQ94 594 aaKnown RBP8.49□□□□□ -1.05
LMO3-220ENST00000539232 DDX20Q9UHI6 824 aaKnown RBP8.49□□□□□ -1.05
LMO3-220ENST00000539232 CTNNA3Q9UI47 895 aa8.49□□□□□ -1.05
LMO3-220ENST00000539232 U3KPZ7 1027 aaPredicted RBP8.49□□□□□ -1.05
LMO3-220ENST00000539232 RLFQ13129 1914 aa8.48□□□□□ -1.05
LMO3-220ENST00000539232 MYADML2A6NDP7 307 aa8.48□□□□□ -1.05
LMO3-220ENST00000539232 PLA2G6O60733 806 aa8.48□□□□□ -1.05
LMO3-220ENST00000539232 CPA1P15085 419 aa8.48□□□□□ -1.05
LMO3-220ENST00000539232 BAATQ14032 418 aaPredicted RBP8.48□□□□□ -1.05
LMO3-220ENST00000539232 CCDC85BQ15834 202 aaPredicted RBP8.48□□□□□ -1.05
LMO3-220ENST00000539232 GLIPR1L2Q4G1C9 344 aa8.48□□□□□ -1.05
LMO3-220ENST00000539232 GJC2Q5T442 439 aaPredicted RBP8.48□□□□□ -1.05
LMO3-220ENST00000539232 CREB3L3Q68CJ9 461 aa8.48□□□□□ -1.05
LMO3-220ENST00000539232 SLC30A10Q6XR72 485 aa8.48□□□□□ -1.05
LMO3-220ENST00000539232 IGDCC4Q8TDY8 1250 aa8.48□□□□□ -1.05
LMO3-220ENST00000539232 RNPC3Q96LT9 517 aaKnown RBP8.48□□□□□ -1.05
LMO3-220ENST00000539232 TCEANC2Q96MN5 208 aa8.48□□□□□ -1.05
LMO3-220ENST00000539232 TTC14Q96N46 770 aa8.48□□□□□ -1.05
LMO3-220ENST00000539232 IPO9Q96P70 1041 aaKnown RBP8.48□□□□□ -1.05
LMO3-220ENST00000539232 TINF2Q9BSI4 451 aa8.48□□□□□ -1.05
LMO3-220ENST00000539232 KATNBL1Q9H079 304 aa8.48□□□□□ -1.05
LMO3-220ENST00000539232 JMJD4Q9H9V9 463 aa8.48□□□□□ -1.05
LMO3-220ENST00000539232 VAT1LQ9HCJ6 419 aa8.48□□□□□ -1.05
LMO3-220ENST00000539232 ANO2Q9NQ90 1003 aa8.48□□□□□ -1.05
LMO3-220ENST00000539232 CCPG1Q9ULG6 757 aa8.48□□□□□ -1.05
LMO3-220ENST00000539232 PLXNB2O15031 1838 aa8.47□□□□□ -1.05
LMO3-220ENST00000539232 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.47□□□□□ -1.05
LMO3-220ENST00000539232 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.47□□□□□ -1.05
LMO3-220ENST00000539232 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.47□□□□□ -1.05
LMO3-220ENST00000539232 PI4K2BG5E9Z4 385 aa8.47□□□□□ -1.05
LMO3-220ENST00000539232 OPLAHO14841 1288 aa8.47□□□□□ -1.05
LMO3-220ENST00000539232 PGK1P00558 417 aa8.47□□□□□ -1.05
LMO3-220ENST00000539232 ICAM1P05362 532 aa8.47□□□□□ -1.05
LMO3-220ENST00000539232 PCP11498 1178 aaKnown RBP8.47□□□□□ -1.05
LMO3-220ENST00000539232 OAZ1P54368 228 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms