RNA–Protein interactions for RNA: ENST00000539176.1

KLHL42-202, Transcript of kelch like family member 42, humanhuman

TSL 3

Gene KLHL42, Length 1,894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL42-202ENST00000539176 PHIPQ8WWQ0 1821 aa28.96■■■□□ 2.23
KLHL42-202ENST00000539176 OTOFQ9HC10 1997 aa28.96■■■□□ 2.23
KLHL42-202ENST00000539176 SPP2Q13103 211 aa28.96■■■□□ 2.23
KLHL42-202ENST00000539176 MTMR2Q13614 643 aa28.96■■■□□ 2.23
KLHL42-202ENST00000539176 SAMD1Q6SPF0 538 aaPredicted RBP28.96■■■□□ 2.23
KLHL42-202ENST00000539176 HOOK1Q9UJC3 728 aaKnown RBP28.96■■■□□ 2.23
KLHL42-202ENST00000539176 KCNH3Q9ULD8 1083 aa28.96■■■□□ 2.23
KLHL42-202ENST00000539176 PCDHB6Q9Y5E3 794 aa28.96■■■□□ 2.23
KLHL42-202ENST00000539176 SMCO2A6NFE2 343 aa28.95■■■□□ 2.23
KLHL42-202ENST00000539176 BECN2A8MW95 431 aa28.95■■■□□ 2.23
KLHL42-202ENST00000539176 TAL1P17542 331 aaPredicted RBP28.95■■■□□ 2.23
KLHL42-202ENST00000539176 BTNL9Q6UXG8 535 aa28.95■■■□□ 2.23
KLHL42-202ENST00000539176 PRR12Q9ULL5 1215 aa28.95■■■□□ 2.23
KLHL42-202ENST00000539176 CLEC11AQ9Y240 323 aa28.95■■■□□ 2.23
KLHL42-202ENST00000539176 PIK3AP1Q6ZUJ8 805 aa28.95■■■□□ 2.22
KLHL42-202ENST00000539176 MOB2Q70IA6 237 aa28.95■■■□□ 2.22
KLHL42-202ENST00000539176 CLIC6Q96NY7 704 aa28.95■■■□□ 2.22
KLHL42-202ENST00000539176 KIAA1683Q9H0B3 1180 aa28.95■■■□□ 2.22
KLHL42-202ENST00000539176 ZMYND12Q9H0C1 365 aa28.95■■■□□ 2.22
KLHL42-202ENST00000539176 FBXO28Q9NVF7 368 aa28.95■■■□□ 2.22
KLHL42-202ENST00000539176 WNT7AO00755 349 aa28.94■■■□□ 2.22
KLHL42-202ENST00000539176 STAT2P52630 851 aa28.94■■■□□ 2.22
KLHL42-202ENST00000539176 PLA2G4DQ86XP0 818 aa28.94■■■□□ 2.22
KLHL42-202ENST00000539176 TUBE1Q9UJT0 475 aa28.94■■■□□ 2.22
KLHL42-202ENST00000539176 ZHX2Q9Y6X8 837 aa28.94■■■□□ 2.22
KLHL42-202ENST00000539176 PAPPA2Q9BXP8 1791 aa28.94■■■□□ 2.22
KLHL42-202ENST00000539176 NLRP12P59046 1061 aa28.93■■■□□ 2.22
KLHL42-202ENST00000539176 PPP1R3FQ6ZSY5 799 aaPredicted RBP28.93■■■□□ 2.22
KLHL42-202ENST00000539176 DAGLBQ8NCG7 672 aa28.93■■■□□ 2.22
KLHL42-202ENST00000539176 PCDHA6Q9UN73 950 aa28.93■■■□□ 2.22
KLHL42-202ENST00000539176 PCDHA8Q9Y5H6 950 aa28.93■■■□□ 2.22
KLHL42-202ENST00000539176 M0R2N6 131 aa28.93■■■□□ 2.22
KLHL42-202ENST00000539176 VGLL4Q14135 290 aa28.93■■■□□ 2.22
KLHL42-202ENST00000539176 NOL9Q5SY16 702 aaKnown RBP28.93■■■□□ 2.22
KLHL42-202ENST00000539176 GALNT17Q6IS24 598 aa28.93■■■□□ 2.22
KLHL42-202ENST00000539176 PNMA8AQ86V59 439 aaPredicted RBP28.93■■■□□ 2.22
KLHL42-202ENST00000539176 CCDC12Q8WUD4 166 aaPredicted RBP28.93■■■□□ 2.22
KLHL42-202ENST00000539176 FERMT2Q96AC1 680 aa28.93■■■□□ 2.22
KLHL42-202ENST00000539176 KIFC2Q96AC6 838 aa28.93■■■□□ 2.22
KLHL42-202ENST00000539176 RRAGCQ9HB90 399 aa28.93■■■□□ 2.22
KLHL42-202ENST00000539176 EMILIN3Q9NT22 766 aa28.93■■■□□ 2.22
KLHL42-202ENST00000539176 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP28.93■■■□□ 2.22
KLHL42-202ENST00000539176 CDC25BP30305 580 aa28.92■■■□□ 2.22
KLHL42-202ENST00000539176 ZNF75DP51815 510 aa28.92■■■□□ 2.22
KLHL42-202ENST00000539176 KRBA2Q6ZNG9 492 aa28.92■■■□□ 2.22
KLHL42-202ENST00000539176 WDR18Q9BV38 432 aa28.92■■■□□ 2.22
KLHL42-202ENST00000539176 SNCAIPQ9Y6H5 919 aa28.92■■■□□ 2.22
KLHL42-202ENST00000539176 hCG_1984214I3L0E3 225 aa28.91■■■□□ 2.22
KLHL42-202ENST00000539176 MAP3K9P80192 1104 aa28.91■■■□□ 2.22
KLHL42-202ENST00000539176 MAP1SQ66K74 1059 aaPredicted RBP28.91■■■□□ 2.22
KLHL42-202ENST00000539176 DHX40Q8IX18 779 aaKnown RBP28.91■■■□□ 2.22
KLHL42-202ENST00000539176 ZNF713Q8N859 430 aaPredicted RBP28.91■■■□□ 2.22
KLHL42-202ENST00000539176 ZNF280CQ8ND82 737 aa28.91■■■□□ 2.22
KLHL42-202ENST00000539176 TRIM5Q9C035 493 aa28.91■■■□□ 2.22
KLHL42-202ENST00000539176 C6orf50Q9HD87 102 aa28.91■■■□□ 2.22
KLHL42-202ENST00000539176 PPP1R12BO60237 982 aaPredicted RBP28.91■■■□□ 2.22
KLHL42-202ENST00000539176 FMR1Q06787 632 aaKnown RBP eCLIP28.91■■■□□ 2.22
KLHL42-202ENST00000539176 CNNM3Q8NE01 707 aa28.91■■■□□ 2.22
KLHL42-202ENST00000539176 AS3MTQ9HBK9 375 aa28.91■■■□□ 2.22
KLHL42-202ENST00000539176 SMCHD1A6NHR9 2005 aa28.9■■■□□ 2.22
KLHL42-202ENST00000539176 CNKSR2Q8WXI2 1034 aa28.9■■■□□ 2.22
KLHL42-202ENST00000539176 TMEM260Q9NX78 707 aa28.9■■■□□ 2.22
KLHL42-202ENST00000539176 USH1GQ495M9 461 aa28.89■■■□□ 2.22
KLHL42-202ENST00000539176 KANK3Q6NY19 840 aa28.89■■■□□ 2.22
KLHL42-202ENST00000539176 CCDC34Q96HJ3 373 aa28.89■■■□□ 2.22
KLHL42-202ENST00000539176 BIN2Q9UBW5 565 aaPredicted RBP28.89■■■□□ 2.22
KLHL42-202ENST00000539176 PCDHA1Q9Y5I3 950 aa28.89■■■□□ 2.22
KLHL42-202ENST00000539176 ESYT2A0FGR8 921 aa28.89■■■□□ 2.21
KLHL42-202ENST00000539176 ADCY7P51828 1080 aa28.89■■■□□ 2.21
KLHL42-202ENST00000539176 BACE1P56817 501 aa28.89■■■□□ 2.21
KLHL42-202ENST00000539176 TTLL12Q14166 644 aaPredicted RBP28.89■■■□□ 2.21
KLHL42-202ENST00000539176 TTC38Q5R3I4 469 aa28.89■■■□□ 2.21
KLHL42-202ENST00000539176 CHURC1Q8WUH1 139 aa28.89■■■□□ 2.21
KLHL42-202ENST00000539176 TRAF5O00463 557 aa28.88■■■□□ 2.21
KLHL42-202ENST00000539176 VCAM1P19320 739 aa28.88■■■□□ 2.21
KLHL42-202ENST00000539176 GNA11P29992 359 aa28.88■■■□□ 2.21
KLHL42-202ENST00000539176 DPCR1Q3MIW9 517 aa28.88■■■□□ 2.21
KLHL42-202ENST00000539176 JAKMIP3Q5VZ66 844 aa28.88■■■□□ 2.21
KLHL42-202ENST00000539176 CCDC174Q6PII3 467 aa28.88■■■□□ 2.21
KLHL42-202ENST00000539176 LPAR1Q92633 364 aa28.88■■■□□ 2.21
KLHL42-202ENST00000539176 MRFAP1L1Q96HT8 127 aa28.88■■■□□ 2.21
KLHL42-202ENST00000539176 CLMNQ96JQ2 1002 aa28.88■■■□□ 2.21
KLHL42-202ENST00000539176 FEM1BQ9UK73 627 aa28.88■■■□□ 2.21
KLHL42-202ENST00000539176 WDR46O15213 610 aaKnown RBP28.87■■■□□ 2.21
KLHL42-202ENST00000539176 NF2P35240 595 aa28.87■■■□□ 2.21
KLHL42-202ENST00000539176 HMGCS2P54868 508 aa28.87■■■□□ 2.21
KLHL42-202ENST00000539176 UBE2SQ16763 222 aa28.87■■■□□ 2.21
KLHL42-202ENST00000539176 FBXO11Q86XK2 927 aa28.87■■■□□ 2.21
KLHL42-202ENST00000539176 ZNF526Q8TF50 670 aaPredicted RBP28.87■■■□□ 2.21
KLHL42-202ENST00000539176 ERCC4Q92889 916 aaPredicted RBP28.87■■■□□ 2.21
KLHL42-202ENST00000539176 CCDC194A0A1B0GVG4 234 aa28.87■■■□□ 2.21
KLHL42-202ENST00000539176 IREB2P48200 963 aaKnown RBP28.87■■■□□ 2.21
KLHL42-202ENST00000539176 TPM4P67936 248 aa28.87■■■□□ 2.21
KLHL42-202ENST00000539176 PPP1R18Q6NYC8 613 aa28.87■■■□□ 2.21
KLHL42-202ENST00000539176 FAM160B2Q86V87 743 aa28.87■■■□□ 2.21
KLHL42-202ENST00000539176 AMNQ9BXJ7 453 aa28.87■■■□□ 2.21
KLHL42-202ENST00000539176 TANGO6Q9C0B7 1094 aa28.87■■■□□ 2.21
KLHL42-202ENST00000539176 ZNF174Q15697 407 aa28.86■■■□□ 2.21
KLHL42-202ENST00000539176 LONRF3Q496Y0 759 aa28.86■■■□□ 2.21
KLHL42-202ENST00000539176 AOPEPQ8N6M6 819 aa28.86■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms