RNA–Protein interactions for RNA: ENST00000538859.1

NPIPB4-209, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 5

Gene NPIPB4, Length 526 nt, Biotype processed transcript.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-209ENST00000538859 PHC3Q8NDX5 983 aa2.68□□□□□ -1.98
NPIPB4-209ENST00000538859 NUP43Q8NFH3 380 aa2.68□□□□□ -1.98
NPIPB4-209ENST00000538859 GATAD2BQ8WXI9 593 aa2.68□□□□□ -1.98
NPIPB4-209ENST00000538859 ZG16BQ96DA0 208 aa2.68□□□□□ -1.98
NPIPB4-209ENST00000538859 KRTAP1-5Q9BYS1 174 aa2.68□□□□□ -1.98
NPIPB4-209ENST00000538859 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP2.68□□□□□ -1.98
NPIPB4-209ENST00000538859 CD248Q9HCU0 757 aa2.68□□□□□ -1.98
NPIPB4-209ENST00000538859 LOC105371045A0A1W2PR82 267 aa2.67□□□□□ -1.98
NPIPB4-209ENST00000538859 PRPF40AO75400 957 aaKnown RBP2.67□□□□□ -1.98
NPIPB4-209ENST00000538859 UBOX5O94941 541 aa2.67□□□□□ -1.98
NPIPB4-209ENST00000538859 PRAMEF1O95521 474 aa2.67□□□□□ -1.98
NPIPB4-209ENST00000538859 F13A1P00488 732 aa2.67□□□□□ -1.98
NPIPB4-209ENST00000538859 PLA2G1BP04054 148 aaKnown RBP2.67□□□□□ -1.98
NPIPB4-209ENST00000538859 FBLP22087 321 aaKnown RBP2.67□□□□□ -1.98
NPIPB4-209ENST00000538859 LMNB2Q03252 620 aa2.67□□□□□ -1.98
NPIPB4-209ENST00000538859 CAMK2GQ13555 558 aaPredicted RBP2.67□□□□□ -1.98
NPIPB4-209ENST00000538859 MLECQ14165 292 aa2.67□□□□□ -1.98
NPIPB4-209ENST00000538859 ICAM4Q14773 271 aa2.67□□□□□ -1.98
NPIPB4-209ENST00000538859 R3HDM1Q15032 1099 aaKnown RBP2.67□□□□□ -1.98
NPIPB4-209ENST00000538859 TAF1CQ15572 869 aaPredicted RBP2.67□□□□□ -1.98
NPIPB4-209ENST00000538859 NBPF12Q5TAG4 269 aaPredicted RBP2.67□□□□□ -1.98
NPIPB4-209ENST00000538859 MEI1Q5TIA1 1274 aa2.67□□□□□ -1.98
NPIPB4-209ENST00000538859 SLCO6A1Q86UG4 719 aa2.67□□□□□ -1.98
NPIPB4-209ENST00000538859 RGS22Q8NE09 1264 aa2.67□□□□□ -1.98
NPIPB4-209ENST00000538859 FNIP1Q8TF40 1166 aa2.67□□□□□ -1.98
NPIPB4-209ENST00000538859 ZNF526Q8TF50 670 aaPredicted RBP2.67□□□□□ -1.98
NPIPB4-209ENST00000538859 EAF1Q96JC9 268 aaPredicted RBP2.67□□□□□ -1.98
NPIPB4-209ENST00000538859 NOC4LQ9BVI4 516 aaKnown RBP2.67□□□□□ -1.98
NPIPB4-209ENST00000538859 KRTAP4-3Q9BYR4 195 aa2.67□□□□□ -1.98
NPIPB4-209ENST00000538859 TNFRSF12AQ9NP84 129 aa2.67□□□□□ -1.98
NPIPB4-209ENST00000538859 GPR55Q9Y2T6 319 aaPredicted RBP2.67□□□□□ -1.98
NPIPB4-209ENST00000538859 POLR3KQ9Y2Y1 108 aaPredicted RBP2.67□□□□□ -1.98
NPIPB4-209ENST00000538859 PMF1-BGLAPU3KQ54 211 aa2.67□□□□□ -1.98
NPIPB4-209ENST00000538859 A0A1W2PQ27 194 aa2.66□□□□□ -1.98
NPIPB4-209ENST00000538859 A0A1W2PQ64 194 aa2.66□□□□□ -1.98
NPIPB4-209ENST00000538859 A0A1W2PQC6 194 aa2.66□□□□□ -1.98
NPIPB4-209ENST00000538859 A0A1W2PQD8 194 aa2.66□□□□□ -1.98
NPIPB4-209ENST00000538859 PROB1E7EW31 1015 aa2.66□□□□□ -1.98
NPIPB4-209ENST00000538859 SIGLEC6O43699 453 aa2.66□□□□□ -1.98
NPIPB4-209ENST00000538859 EIF5BO60841 1220 aaKnown RBP2.66□□□□□ -1.98
NPIPB4-209ENST00000538859 DNAJA2O60884 412 aa2.66□□□□□ -1.98
NPIPB4-209ENST00000538859 IGSF3O75054 1194 aa2.66□□□□□ -1.98
NPIPB4-209ENST00000538859 BRD1O95696 1058 aa2.66□□□□□ -1.98
NPIPB4-209ENST00000538859 PF4P02776 101 aa2.66□□□□□ -1.98
NPIPB4-209ENST00000538859 MSL3P1P0C860 447 aa2.66□□□□□ -1.98
NPIPB4-209ENST00000538859 ZNF200P98182 395 aaPredicted RBP2.66□□□□□ -1.98
NPIPB4-209ENST00000538859 RAD51AP2Q09MP3 1159 aa2.66□□□□□ -1.98
NPIPB4-209ENST00000538859 SNW1Q13573 536 aaKnown RBP2.66□□□□□ -1.98
NPIPB4-209ENST00000538859 PLEKHN1Q494U1 663 aaPredicted RBP2.66□□□□□ -1.98
NPIPB4-209ENST00000538859 ARSHQ5FYA8 562 aa2.66□□□□□ -1.98
NPIPB4-209ENST00000538859 LIMS2Q7Z4I7 341 aa2.66□□□□□ -1.98
NPIPB4-209ENST00000538859 SAPCD2Q86UD0 394 aa2.66□□□□□ -1.98
NPIPB4-209ENST00000538859 RELL1Q8IUW5 271 aa2.66□□□□□ -1.98
NPIPB4-209ENST00000538859 TMEM52Q8NDY8 209 aa2.66□□□□□ -1.98
NPIPB4-209ENST00000538859 CDADC1Q9BWV3 514 aa2.66□□□□□ -1.98
NPIPB4-209ENST00000538859 CHST7Q9NS84 486 aa2.66□□□□□ -1.98
NPIPB4-209ENST00000538859 IMPACTQ9P2X3 320 aa2.66□□□□□ -1.98
NPIPB4-209ENST00000538859 OBSCNQ5VST9 7968 aa2.66□□□□□ -1.98
NPIPB4-209ENST00000538859 A0A087X1B8 175 aa2.65□□□□□ -1.99
NPIPB4-209ENST00000538859 ATF2P15336 505 aa2.65□□□□□ -1.99
NPIPB4-209ENST00000538859 VAV1P15498 845 aa2.65□□□□□ -1.99
NPIPB4-209ENST00000538859 RAG1P15918 1043 aa2.65□□□□□ -1.99
NPIPB4-209ENST00000538859 BMP8BP34820 402 aa2.65□□□□□ -1.99
NPIPB4-209ENST00000538859 CEBPAP49715 358 aaPredicted RBP2.65□□□□□ -1.99
NPIPB4-209ENST00000538859 ST13P50502 369 aaKnown RBP2.65□□□□□ -1.99
NPIPB4-209ENST00000538859 HTRA3P83110 453 aa2.65□□□□□ -1.99
NPIPB4-209ENST00000538859 CCDC27Q2M243 656 aa2.65□□□□□ -1.99
NPIPB4-209ENST00000538859 PAPD7Q5XG87 772 aaKnown RBP2.65□□□□□ -1.99
NPIPB4-209ENST00000538859 PAQR3Q6TCH7 311 aa2.65□□□□□ -1.99
NPIPB4-209ENST00000538859 ZNF428Q96B54 188 aa2.65□□□□□ -1.99
NPIPB4-209ENST00000538859 JMJD8Q96S16 334 aa2.65□□□□□ -1.99
NPIPB4-209ENST00000538859 CDK5RAP1Q96SZ6 601 aaKnown RBP2.65□□□□□ -1.99
NPIPB4-209ENST00000538859 DUSP9Q99956 384 aaKnown RBP2.65□□□□□ -1.99
NPIPB4-209ENST00000538859 TRIM8Q9BZR9 551 aa2.65□□□□□ -1.99
NPIPB4-209ENST00000538859 ANTXR1Q9H6X2 564 aa2.65□□□□□ -1.99
NPIPB4-209ENST00000538859 ERVK13-1Q9NX77 482 aa2.65□□□□□ -1.99
NPIPB4-209ENST00000538859 MINPP1Q9UNW1 487 aa2.65□□□□□ -1.99
NPIPB4-209ENST00000538859 ZFR2Q9UPR6 939 aaKnown RBP2.65□□□□□ -1.99
NPIPB4-209ENST00000538859 FAN1Q9Y2M0 1017 aa2.65□□□□□ -1.99
NPIPB4-209ENST00000538859 USP31Q70CQ4 1352 aa2.64□□□□□ -1.99
NPIPB4-209ENST00000538859 A0A1W2PQJ5 194 aa2.64□□□□□ -1.99
NPIPB4-209ENST00000538859 F6X3S4 739 aa2.64□□□□□ -1.99
NPIPB4-209ENST00000538859 F8W031 263 aaPredicted RBP2.64□□□□□ -1.99
NPIPB4-209ENST00000538859 MEIS1O00470 390 aa2.64□□□□□ -1.99
NPIPB4-209ENST00000538859 ZNF205O95201 554 aa2.64□□□□□ -1.99
NPIPB4-209ENST00000538859 CYBBP04839 570 aa2.64□□□□□ -1.99
NPIPB4-209ENST00000538859 NCAM1P13591 858 aa2.64□□□□□ -1.99
NPIPB4-209ENST00000538859 GBP2P32456 591 aaPredicted RBP2.64□□□□□ -1.99
NPIPB4-209ENST00000538859 GJA9P57773 515 aa2.64□□□□□ -1.99
NPIPB4-209ENST00000538859 KCNA1Q09470 495 aa2.64□□□□□ -1.99
NPIPB4-209ENST00000538859 MPP2Q14168 576 aa2.64□□□□□ -1.99
NPIPB4-209ENST00000538859 HLA-DQA1Q5Y7H0 255 aa2.64□□□□□ -1.99
NPIPB4-209ENST00000538859 REC114Q7Z4M0 266 aa2.64□□□□□ -1.99
NPIPB4-209ENST00000538859 JAMLQ86YT9 394 aa2.64□□□□□ -1.99
NPIPB4-209ENST00000538859 PALM2Q8IXS6 379 aa2.64□□□□□ -1.99
NPIPB4-209ENST00000538859 CARFQ8N187 725 aa2.64□□□□□ -1.99
NPIPB4-209ENST00000538859 TMEM74Q96NL1 305 aa2.64□□□□□ -1.99
NPIPB4-209ENST00000538859 POLR3GLQ9BT43 218 aa2.64□□□□□ -1.99
NPIPB4-209ENST00000538859 ZNF341Q9BYN7 854 aa2.64□□□□□ -1.99
NPIPB4-209ENST00000538859 RNF38Q9H0F5 515 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms