RNA–Protein interactions for RNA: ENST00000538073.5

CIT-209, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 533 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-209ENST00000538073 ZFYVE28Q9HCC9 887 aa9.3□□□□□ -0.92
CIT-209ENST00000538073 TXNRD2Q9NNW7 524 aa9.3□□□□□ -0.92
CIT-209ENST00000538073 RNF186Q9NXI6 227 aa9.3□□□□□ -0.92
CIT-209ENST00000538073 SAGE1Q9NXZ1 904 aa9.3□□□□□ -0.92
CIT-209ENST00000538073 RBM27Q9P2N5 1060 aaKnown RBP9.3□□□□□ -0.92
CIT-209ENST00000538073 V9GY48 417 aaPredicted RBP9.3□□□□□ -0.92
CIT-209ENST00000538073 BAZ2BQ9UIF8 2168 aaKnown RBP9.29□□□□□ -0.92
CIT-209ENST00000538073 PTPDC1A2A3K4 754 aa9.29□□□□□ -0.92
CIT-209ENST00000538073 hCG_1984214I3L0E3 225 aa9.29□□□□□ -0.92
CIT-209ENST00000538073 JAK2O60674 1132 aa9.29□□□□□ -0.92
CIT-209ENST00000538073 PEX10O60683 326 aa9.29□□□□□ -0.92
CIT-209ENST00000538073 PPP1R11O60927 126 aaPredicted RBP9.29□□□□□ -0.92
CIT-209ENST00000538073 DEXIO95424 95 aa9.29□□□□□ -0.92
CIT-209ENST00000538073 SNAP25P60880 206 aa9.29□□□□□ -0.92
CIT-209ENST00000538073 ERVK-9P63128 1117 aa9.29□□□□□ -0.92
CIT-209ENST00000538073 ERVK-24P63145 666 aa9.29□□□□□ -0.92
CIT-209ENST00000538073 MAP2K1Q02750 393 aaPredicted RBP9.29□□□□□ -0.92
CIT-209ENST00000538073 PFKFB3Q16875 520 aaPredicted RBP9.29□□□□□ -0.92
CIT-209ENST00000538073 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.29□□□□□ -0.92
CIT-209ENST00000538073 HOMER1Q86YM7 354 aa9.29□□□□□ -0.92
CIT-209ENST00000538073 RIOX2Q8IUF8 465 aa9.29□□□□□ -0.92
CIT-209ENST00000538073 ZNF713Q8N859 430 aaPredicted RBP9.29□□□□□ -0.92
CIT-209ENST00000538073 JMYQ8N9B5 988 aa9.29□□□□□ -0.92
CIT-209ENST00000538073 INTS4Q96HW7 963 aaKnown RBP9.29□□□□□ -0.92
CIT-209ENST00000538073 PAGR1Q9BTK6 254 aa9.29□□□□□ -0.92
CIT-209ENST00000538073 AMNQ9BXJ7 453 aa9.29□□□□□ -0.92
CIT-209ENST00000538073 SLC26A6Q9BXS9 759 aa9.29□□□□□ -0.92
CIT-209ENST00000538073 SPATC1LQ9H0A9 340 aa9.29□□□□□ -0.92
CIT-209ENST00000538073 R3HDMLQ9H3Y0 253 aa9.29□□□□□ -0.92
CIT-209ENST00000538073 RAVER2Q9HCJ3 691 aaKnown RBP9.29□□□□□ -0.92
CIT-209ENST00000538073 SEC63Q9UGP8 760 aaKnown RBP9.29□□□□□ -0.92
CIT-209ENST00000538073 PNMA2Q9UL42 364 aa9.29□□□□□ -0.92
CIT-209ENST00000538073 RBM19Q9Y4C8 960 aaKnown RBP9.29□□□□□ -0.92
CIT-209ENST00000538073 hCG_1642624A0A1W2PR95 340 aa9.28□□□□□ -0.92
CIT-209ENST00000538073 PPFIA3O75145 1194 aa9.28□□□□□ -0.92
CIT-209ENST00000538073 TRPA1O75762 1119 aa9.28□□□□□ -0.92
CIT-209ENST00000538073 SCG2P13521 617 aa9.28□□□□□ -0.92
CIT-209ENST00000538073 STAT3P40763 770 aa9.28□□□□□ -0.92
CIT-209ENST00000538073 HMGN5P82970 282 aaKnown RBP9.28□□□□□ -0.92
CIT-209ENST00000538073 AKAP17AQ02040 695 aaKnown RBP9.28□□□□□ -0.92
CIT-209ENST00000538073 TRAF1Q13077 416 aa9.28□□□□□ -0.92
CIT-209ENST00000538073 BECN1Q14457 450 aa9.28□□□□□ -0.92
CIT-209ENST00000538073 Q3C1V9 767 aa9.28□□□□□ -0.92
CIT-209ENST00000538073 NOM1Q5C9Z4 860 aaKnown RBP9.28□□□□□ -0.92
CIT-209ENST00000538073 SNRNP48Q6IEG0 339 aaKnown RBP9.28□□□□□ -0.92
CIT-209ENST00000538073 CCDC174Q6PII3 467 aa9.28□□□□□ -0.92
CIT-209ENST00000538073 ZNF467Q7Z7K2 595 aaPredicted RBP9.28□□□□□ -0.92
CIT-209ENST00000538073 FBXO11Q86XK2 927 aa9.28□□□□□ -0.92
CIT-209ENST00000538073 TRIM22Q8IYM9 498 aa9.28□□□□□ -0.92
CIT-209ENST00000538073 ANKRD13CQ8N6S4 541 aa9.28□□□□□ -0.92
CIT-209ENST00000538073 SHCBP1Q8NEM2 672 aa9.28□□□□□ -0.92
CIT-209ENST00000538073 GPRC5AQ8NFJ5 357 aa9.28□□□□□ -0.92
CIT-209ENST00000538073 AGBL1Q96MI9 1066 aa9.28□□□□□ -0.92
CIT-209ENST00000538073 MOV10L1Q9BXT6 1211 aaKnown RBP9.28□□□□□ -0.92
CIT-209ENST00000538073 TEX13BQ9BXU2 312 aa9.28□□□□□ -0.92
CIT-209ENST00000538073 WBP1LQ9NX94 342 aa9.28□□□□□ -0.92
CIT-209ENST00000538073 CPA4Q9UI42 421 aa9.28□□□□□ -0.92
CIT-209ENST00000538073 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.28□□□□□ -0.92
CIT-209ENST00000538073 CTDP1Q9Y5B0 961 aaPredicted RBP9.28□□□□□ -0.92
CIT-209ENST00000538073 ABCB11O95342 1321 aa9.28□□□□□ -0.92
CIT-209ENST00000538073 SMCHD1A6NHR9 2005 aa9.27□□□□□ -0.92
CIT-209ENST00000538073 RBBP6Q7Z6E9 1792 aaKnown RBP9.27□□□□□ -0.92
CIT-209ENST00000538073 FAM205CA6NFA0 338 aa9.27□□□□□ -0.93
CIT-209ENST00000538073 STXBP3O00186 592 aa9.27□□□□□ -0.93
CIT-209ENST00000538073 DTNBO60941 627 aa9.27□□□□□ -0.93
CIT-209ENST00000538073 TBC1D8O95759 1140 aa9.27□□□□□ -0.93
CIT-209ENST00000538073 SLC25A27O95847 323 aa9.27□□□□□ -0.93
CIT-209ENST00000538073 COPB2P35606 906 aa9.27□□□□□ -0.93
CIT-209ENST00000538073 CCNA1P78396 465 aa9.27□□□□□ -0.93
CIT-209ENST00000538073 TKFCQ3LXA3 575 aa9.27□□□□□ -0.93
CIT-209ENST00000538073 WWC2Q6AWC2 1192 aa9.27□□□□□ -0.93
CIT-209ENST00000538073 TYW1BQ6NUM6 668 aa9.27□□□□□ -0.93
CIT-209ENST00000538073 PPP1R18Q6NYC8 613 aa9.27□□□□□ -0.93
CIT-209ENST00000538073 CPXCR1Q8N123 301 aa9.27□□□□□ -0.93
CIT-209ENST00000538073 FAM177A1Q8N128 213 aaPredicted RBP9.27□□□□□ -0.93
CIT-209ENST00000538073 CHST13Q8NET6 341 aa9.27□□□□□ -0.93
CIT-209ENST00000538073 PIBF1Q8WXW3 757 aa9.27□□□□□ -0.93
CIT-209ENST00000538073 SHISA4Q96DD7 197 aa9.27□□□□□ -0.93
CIT-209ENST00000538073 HS3ST6Q96QI5 342 aa9.27□□□□□ -0.93
CIT-209ENST00000538073 MAF1Q9H063 256 aa9.27□□□□□ -0.93
CIT-209ENST00000538073 MROH8Q9H579 483 aa9.27□□□□□ -0.93
CIT-209ENST00000538073 SH3GLB2Q9NR46 395 aa9.27□□□□□ -0.93
CIT-209ENST00000538073 BARHL2Q9NY43 387 aa9.27□□□□□ -0.93
CIT-209ENST00000538073 ORC3Q9UBD5 711 aaPredicted RBP9.27□□□□□ -0.93
CIT-209ENST00000538073 CCPG1Q9ULG6 757 aa9.27□□□□□ -0.93
CIT-209ENST00000538073 RIPK3Q9Y572 518 aa9.27□□□□□ -0.93
CIT-209ENST00000538073 PCDHA1Q9Y5I3 950 aa9.27□□□□□ -0.93
CIT-209ENST00000538073 MGAMO43451 1857 aa9.26□□□□□ -0.93
CIT-209ENST00000538073 OPLAHO14841 1288 aa9.26□□□□□ -0.93
CIT-209ENST00000538073 ALAS1P13196 640 aa9.26□□□□□ -0.93
CIT-209ENST00000538073 TAL1P17542 331 aaPredicted RBP9.26□□□□□ -0.93
CIT-209ENST00000538073 GJB2P29033 226 aa9.26□□□□□ -0.93
CIT-209ENST00000538073 ANP32AP39687 249 aaKnown RBP9.26□□□□□ -0.93
CIT-209ENST00000538073 GHRHRQ02643 423 aa9.26□□□□□ -0.93
CIT-209ENST00000538073 PLS1Q14651 629 aa9.26□□□□□ -0.93
CIT-209ENST00000538073 USH1GQ495M9 461 aa9.26□□□□□ -0.93
CIT-209ENST00000538073 HEATR3Q7Z4Q2 680 aa9.26□□□□□ -0.93
CIT-209ENST00000538073 TEX2Q8IWB9 1127 aa9.26□□□□□ -0.93
CIT-209ENST00000538073 RGS22Q8NE09 1264 aa9.26□□□□□ -0.93
CIT-209ENST00000538073 CLEC4DQ8WXI8 215 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms