RNA–Protein interactions for RNA: ENST00000537965.5

SNHG1-207, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-207ENST00000537965 DZIP1LQ8IYY4 767 aaKnown RBP6.7□□□□□ -1.34
SNHG1-207ENST00000537965 TBC1D22AQ8WUA7 517 aa6.7□□□□□ -1.34
SNHG1-207ENST00000537965 ZNF333Q96JL9 665 aa6.7□□□□□ -1.34
SNHG1-207ENST00000537965 SPOCK3Q9BQ16 436 aa6.7□□□□□ -1.34
SNHG1-207ENST00000537965 ELP3Q9H9T3 547 aa6.7□□□□□ -1.34
SNHG1-207ENST00000537965 C9orf78Q9NZ63 289 aaPredicted RBP6.7□□□□□ -1.34
SNHG1-207ENST00000537965 TMOD2Q9NZR1 351 aa6.7□□□□□ -1.34
SNHG1-207ENST00000537965 ZNF70Q9UC06 446 aaPredicted RBP6.7□□□□□ -1.34
SNHG1-207ENST00000537965 TTF2Q9UNY4 1162 aaKnown RBP6.7□□□□□ -1.34
SNHG1-207ENST00000537965 FZD1Q9UP38 647 aa6.7□□□□□ -1.34
SNHG1-207ENST00000537965 CCL15-CCL14A0A0B4J2E2 113 aa6.69□□□□□ -1.34
SNHG1-207ENST00000537965 TLR2O60603 784 aa6.69□□□□□ -1.34
SNHG1-207ENST00000537965 FRAT2O75474 233 aaPredicted RBP6.69□□□□□ -1.34
SNHG1-207ENST00000537965 RGS9O75916 674 aaPredicted RBP6.69□□□□□ -1.34
SNHG1-207ENST00000537965 PROCP04070 461 aa6.69□□□□□ -1.34
SNHG1-207ENST00000537965 SPATA31C1P0DKV0 1188 aa6.69□□□□□ -1.34
SNHG1-207ENST00000537965 SCNN1AP37088 669 aa6.69□□□□□ -1.34
SNHG1-207ENST00000537965 NRLP54845 237 aa6.69□□□□□ -1.34
SNHG1-207ENST00000537965 FOXO4P98177 505 aa6.69□□□□□ -1.34
SNHG1-207ENST00000537965 SNAPC2Q13487 334 aa6.69□□□□□ -1.34
SNHG1-207ENST00000537965 TRIP4Q15650 581 aaPredicted RBP6.69□□□□□ -1.34
SNHG1-207ENST00000537965 CCL15Q16663 113 aa6.69□□□□□ -1.34
SNHG1-207ENST00000537965 CAVIN4Q5BKX8 364 aa6.69□□□□□ -1.34
SNHG1-207ENST00000537965 FKBP1CQ5VVH2 108 aa6.69□□□□□ -1.34
SNHG1-207ENST00000537965 DCAF15Q66K64 600 aa6.69□□□□□ -1.34
SNHG1-207ENST00000537965 PSAPL1Q6NUJ1 521 aa6.69□□□□□ -1.34
SNHG1-207ENST00000537965 LMBR1LQ6UX01 489 aa6.69□□□□□ -1.34
SNHG1-207ENST00000537965 G2E3Q7L622 706 aa6.69□□□□□ -1.34
SNHG1-207ENST00000537965 FAM35AQ86V20 835 aa6.69□□□□□ -1.34
SNHG1-207ENST00000537965 ERO1BQ86YB8 467 aa6.69□□□□□ -1.34
SNHG1-207ENST00000537965 TDRD7Q8NHU6 1098 aaKnown RBP6.69□□□□□ -1.34
SNHG1-207ENST00000537965 HELQQ8TDG4 1101 aa6.69□□□□□ -1.34
SNHG1-207ENST00000537965 NUDT8Q8WV74 236 aa6.69□□□□□ -1.34
SNHG1-207ENST00000537965 TSR2Q969E8 191 aaKnown RBP6.69□□□□□ -1.34
SNHG1-207ENST00000537965 PTPN18Q99952 460 aa6.69□□□□□ -1.34
SNHG1-207ENST00000537965 MRIQ9BWK5 157 aa6.69□□□□□ -1.34
SNHG1-207ENST00000537965 TDRD3Q9H7E2 651 aaKnown RBP6.69□□□□□ -1.34
SNHG1-207ENST00000537965 JPH1Q9HDC5 661 aaPredicted RBP6.69□□□□□ -1.34
SNHG1-207ENST00000537965 FRRS1LQ9P0K9 344 aa6.69□□□□□ -1.34
SNHG1-207ENST00000537965 SUGT1Q9Y2Z0 365 aa6.69□□□□□ -1.34
SNHG1-207ENST00000537965 MYH2Q9UKX2 1941 aa6.69□□□□□ -1.34
SNHG1-207ENST00000537965 MAST3O60307 1309 aa6.69□□□□□ -1.34
SNHG1-207ENST00000537965 MROH5Q6ZUA9 1318 aa6.69□□□□□ -1.34
SNHG1-207ENST00000537965 IRS2Q9Y4H2 1338 aa6.69□□□□□ -1.34
SNHG1-207ENST00000537965 SSC5DA1L4H1 1573 aa6.69□□□□□ -1.34
SNHG1-207ENST00000537965 TCP10L2B9ZVM9 353 aa6.68□□□□□ -1.34
SNHG1-207ENST00000537965 GRM8O00222 908 aa6.68□□□□□ -1.34
SNHG1-207ENST00000537965 MMP20O60882 483 aa6.68□□□□□ -1.34
SNHG1-207ENST00000537965 ALDH1L1O75891 902 aa6.68□□□□□ -1.34
SNHG1-207ENST00000537965 HOXD8P13378 290 aaPredicted RBP6.68□□□□□ -1.34
SNHG1-207ENST00000537965 CPB1P15086 417 aa6.68□□□□□ -1.34
SNHG1-207ENST00000537965 CRKP46108 304 aa6.68□□□□□ -1.34
SNHG1-207ENST00000537965 AFF1P51825 1210 aaKnown RBP6.68□□□□□ -1.34
SNHG1-207ENST00000537965 PRRT3Q5FWE3 981 aa6.68□□□□□ -1.34
SNHG1-207ENST00000537965 BEND3Q5T5X7 828 aa6.68□□□□□ -1.34
SNHG1-207ENST00000537965 PHLDB3Q6NSJ2 640 aa6.68□□□□□ -1.34
SNHG1-207ENST00000537965 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.68□□□□□ -1.34
SNHG1-207ENST00000537965 FAM83AQ86UY5 434 aa6.68□□□□□ -1.34
SNHG1-207ENST00000537965 CD163Q86VB7 1156 aa6.68□□□□□ -1.34
SNHG1-207ENST00000537965 WDR63Q8IWG1 891 aa6.68□□□□□ -1.34
SNHG1-207ENST00000537965 GPR152Q8TDT2 470 aa6.68□□□□□ -1.34
SNHG1-207ENST00000537965 BRI3BPQ8WY22 251 aa6.68□□□□□ -1.34
SNHG1-207ENST00000537965 TEKT1Q969V4 418 aa6.68□□□□□ -1.34
SNHG1-207ENST00000537965 FNDC3AQ9Y2H6 1198 aaKnown RBP6.68□□□□□ -1.34
SNHG1-207ENST00000537965 CARNS1A5YM72 827 aa6.67□□□□□ -1.34
SNHG1-207ENST00000537965 C1QTNF9BB2RNN3 333 aa6.67□□□□□ -1.34
SNHG1-207ENST00000537965 SNAP23O00161 211 aa6.67□□□□□ -1.34
SNHG1-207ENST00000537965 VAMP4O75379 141 aa6.67□□□□□ -1.34
SNHG1-207ENST00000537965 PSAPP07602 524 aa6.67□□□□□ -1.34
SNHG1-207ENST00000537965 SOX18P35713 384 aa6.67□□□□□ -1.34
SNHG1-207ENST00000537965 FXR1P51114 621 aaKnown RBP eCLIP6.67□□□□□ -1.34
SNHG1-207ENST00000537965 LACTBP83111 547 aaPredicted RBP6.67□□□□□ -1.34
SNHG1-207ENST00000537965 PLAURQ03405 335 aa6.67□□□□□ -1.34
SNHG1-207ENST00000537965 PPATQ06203 517 aa6.67□□□□□ -1.34
SNHG1-207ENST00000537965 PPIL2Q13356 520 aa6.67□□□□□ -1.34
SNHG1-207ENST00000537965 VGLL4Q14135 290 aa6.67□□□□□ -1.34
SNHG1-207ENST00000537965 PERM1Q5SV97 790 aa6.67□□□□□ -1.34
SNHG1-207ENST00000537965 HOMEZQ8IX15 550 aa6.67□□□□□ -1.34
SNHG1-207ENST00000537965 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.67□□□□□ -1.34
SNHG1-207ENST00000537965 GTF3C2Q8WUA4 911 aaPredicted RBP6.67□□□□□ -1.34
SNHG1-207ENST00000537965 TTC9Q92623 222 aa6.67□□□□□ -1.34
SNHG1-207ENST00000537965 FAM84BQ96KN1 310 aaPredicted RBP6.67□□□□□ -1.34
SNHG1-207ENST00000537965 TEPSINQ96N21 525 aa6.67□□□□□ -1.34
SNHG1-207ENST00000537965 LPIN3Q9BQK8 851 aa6.67□□□□□ -1.34
SNHG1-207ENST00000537965 HTATIP2Q9BUP3 242 aa6.67□□□□□ -1.34
SNHG1-207ENST00000537965 USTQ9Y2C2 406 aa6.67□□□□□ -1.34
SNHG1-207ENST00000537965 PCDHAC2Q9Y5I4 1007 aa6.67□□□□□ -1.34
SNHG1-207ENST00000537965 PTCH2Q9Y6C5 1203 aa6.67□□□□□ -1.34
SNHG1-207ENST00000537965 BRCA2P51587 3418 aa6.66□□□□□ -1.34
SNHG1-207ENST00000537965 PTPRFP10586 1907 aa6.66□□□□□ -1.34
SNHG1-207ENST00000537965 CHRNA4P43681 627 aa6.66□□□□□ -1.34
SNHG1-207ENST00000537965 GYG1P46976 350 aa6.66□□□□□ -1.34
SNHG1-207ENST00000537965 UBXN2AP68543 259 aa6.66□□□□□ -1.34
SNHG1-207ENST00000537965 ELMSAN1Q6PJG2 1045 aa6.66□□□□□ -1.34
SNHG1-207ENST00000537965 HHIPL2Q6UWX4 724 aa6.66□□□□□ -1.34
SNHG1-207ENST00000537965 FBXO33Q7Z6M2 555 aa6.66□□□□□ -1.34
SNHG1-207ENST00000537965 FAM43AQ8N2R8 423 aa6.66□□□□□ -1.34
SNHG1-207ENST00000537965 RAET1EQ8TD07 263 aa6.66□□□□□ -1.34
SNHG1-207ENST00000537965 DPF3Q92784 378 aa6.66□□□□□ -1.34
SNHG1-207ENST00000537965 ZDHHC15Q96MV8 337 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms