RNA–Protein interactions for RNA: ENST00000537529.6

MKS1-204, Transcript of Meckel syndrome, type 1, humanhuman

TSL 1 (best) BASIC

Gene MKS1, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-204ENST00000537529 ZSCAN29Q8IWY8 852 aaPredicted RBP17.64■□□□□ 0.41
MKS1-204ENST00000537529 CCDC47Q96A33 483 aaKnown RBP17.64■□□□□ 0.41
MKS1-204ENST00000537529 BAG1Q99933 345 aaPredicted RBP17.64■□□□□ 0.41
MKS1-204ENST00000537529 NYAP2Q9P242 653 aa17.64■□□□□ 0.41
MKS1-204ENST00000537529 ZBTB5O15062 677 aa17.63■□□□□ 0.41
MKS1-204ENST00000537529 GOLGA8FQ08AF8 430 aa17.63■□□□□ 0.41
MKS1-204ENST00000537529 GOLGA8DPQ0D2H9 430 aa17.63■□□□□ 0.41
MKS1-204ENST00000537529 STIM1Q13586 685 aa17.63■□□□□ 0.41
MKS1-204ENST00000537529 CALCRLQ16602 461 aa17.63■□□□□ 0.41
MKS1-204ENST00000537529 TMEM266Q2M3C6 531 aa17.63■□□□□ 0.41
MKS1-204ENST00000537529 TTBK2Q6IQ55 1244 aa17.63■□□□□ 0.41
MKS1-204ENST00000537529 DCAF4Q8WV16 495 aa17.63■□□□□ 0.41
MKS1-204ENST00000537529 CUL5Q93034 780 aa17.63■□□□□ 0.41
MKS1-204ENST00000537529 MTMR8Q96EF0 704 aa17.63■□□□□ 0.41
MKS1-204ENST00000537529 PLIN2Q99541 437 aa17.63■□□□□ 0.41
MKS1-204ENST00000537529 KANSL2Q9H9L4 492 aa17.63■□□□□ 0.41
MKS1-204ENST00000537529 LIMA1Q9UHB6 759 aaKnown RBP17.63■□□□□ 0.41
MKS1-204ENST00000537529 GDAQ9Y2T3 454 aa17.63■□□□□ 0.41
MKS1-204ENST00000537529 PCDHAC2Q9Y5I4 1007 aa17.63■□□□□ 0.41
MKS1-204ENST00000537529 ZNF646O15015 1829 aaPredicted RBP17.63■□□□□ 0.41
MKS1-204ENST00000537529 DDTLA6NHG4 134 aaPredicted RBP17.63■□□□□ 0.41
MKS1-204ENST00000537529 TECP42680 631 aa17.63■□□□□ 0.41
MKS1-204ENST00000537529 KMT5BQ4FZB7 885 aa17.63■□□□□ 0.41
MKS1-204ENST00000537529 KCTD1Q719H9 257 aa17.63■□□□□ 0.41
MKS1-204ENST00000537529 TMEM139Q8IV31 216 aa17.63■□□□□ 0.41
MKS1-204ENST00000537529 IGSF22Q8N9C0 903 aa17.63■□□□□ 0.41
MKS1-204ENST00000537529 TC2NQ8N9U0 490 aa17.63■□□□□ 0.41
MKS1-204ENST00000537529 C7orf43Q8WVR3 580 aa17.63■□□□□ 0.41
MKS1-204ENST00000537529 MKL1Q969V6 931 aa17.63■□□□□ 0.41
MKS1-204ENST00000537529 CALML4Q96GE6 196 aa17.63■□□□□ 0.41
MKS1-204ENST00000537529 GTPBP4Q9BZE4 634 aaKnown RBP17.63■□□□□ 0.41
MKS1-204ENST00000537529 SIPA1L1O43166 1804 aa17.63■□□□□ 0.41
MKS1-204ENST00000537529 ZSCAN12O43309 604 aa17.62■□□□□ 0.41
MKS1-204ENST00000537529 STX10O60499 249 aa17.62■□□□□ 0.41
MKS1-204ENST00000537529 PPP1R11O60927 126 aaPredicted RBP17.62■□□□□ 0.41
MKS1-204ENST00000537529 RHOBTB3O94955 611 aa17.62■□□□□ 0.41
MKS1-204ENST00000537529 PRCPP42785 496 aa17.62■□□□□ 0.41
MKS1-204ENST00000537529 MRPL12P52815 198 aaKnown RBP17.62■□□□□ 0.41
MKS1-204ENST00000537529 PPFIBP1Q86W92 1011 aa17.62■□□□□ 0.41
MKS1-204ENST00000537529 ADSSL1Q8N142 457 aa17.62■□□□□ 0.41
MKS1-204ENST00000537529 MTMR9Q96QG7 549 aa17.62■□□□□ 0.41
MKS1-204ENST00000537529 GLT8D2Q9H1C3 349 aa17.62■□□□□ 0.41
MKS1-204ENST00000537529 USP17L10C9JJH3 530 aa17.62■□□□□ 0.41
MKS1-204ENST00000537529 AKR1B15C9JRZ8 316 aaPredicted RBP17.62■□□□□ 0.41
MKS1-204ENST00000537529 TEX33O43247 280 aa17.62■□□□□ 0.41
MKS1-204ENST00000537529 KLRC4O43908 158 aa17.62■□□□□ 0.41
MKS1-204ENST00000537529 EEF2P13639 858 aaKnown RBP17.62■□□□□ 0.41
MKS1-204ENST00000537529 SLC16A2P36021 539 aa17.62■□□□□ 0.41
MKS1-204ENST00000537529 PBX1P40424 430 aa17.62■□□□□ 0.41
MKS1-204ENST00000537529 TNNI2P48788 182 aa17.62■□□□□ 0.41
MKS1-204ENST00000537529 FXR2P51116 673 aaKnown RBP eCLIP17.62■□□□□ 0.41
MKS1-204ENST00000537529 AMPD3Q01432 767 aa17.62■□□□□ 0.41
MKS1-204ENST00000537529 TSC1Q92574 1164 aa17.62■□□□□ 0.41
MKS1-204ENST00000537529 RAB34Q9BZG1 259 aa17.62■□□□□ 0.41
MKS1-204ENST00000537529 SCN9AQ15858 1988 aa17.62■□□□□ 0.41
MKS1-204ENST00000537529 H7C1D1 291 aa17.61■□□□□ 0.41
MKS1-204ENST00000537529 TXKP42681 527 aa17.61■□□□□ 0.41
MKS1-204ENST00000537529 KRT31Q15323 416 aa17.61■□□□□ 0.41
MKS1-204ENST00000537529 TATDN1Q6P1N9 297 aa17.61■□□□□ 0.41
MKS1-204ENST00000537529 TMEM179Q6ZVK1 233 aa17.61■□□□□ 0.41
MKS1-204ENST00000537529 SH3BP5LQ7L8J4 393 aa17.61■□□□□ 0.41
MKS1-204ENST00000537529 PANX2Q96RD6 677 aa17.61■□□□□ 0.41
MKS1-204ENST00000537529 ITIH6Q6UXX5 1313 aa17.61■□□□□ 0.41
MKS1-204ENST00000537529 MYH4Q9Y623 1939 aa17.61■□□□□ 0.41
MKS1-204ENST00000537529 FAM196BA6NMK8 535 aa17.6■□□□□ 0.41
MKS1-204ENST00000537529 KCNJ18B7U540 433 aa17.6■□□□□ 0.41
MKS1-204ENST00000537529 PSMA7O14818 248 aa17.6■□□□□ 0.41
MKS1-204ENST00000537529 ENTPD3O75355 529 aa17.6■□□□□ 0.41
MKS1-204ENST00000537529 SLC1A4P43007 532 aa17.6■□□□□ 0.41
MKS1-204ENST00000537529 CLK2P49760 499 aaKnown RBP17.6■□□□□ 0.41
MKS1-204ENST00000537529 ADKP55263 362 aaKnown RBP17.6■□□□□ 0.41
MKS1-204ENST00000537529 KCNJ12Q14500 433 aa17.6■□□□□ 0.41
MKS1-204ENST00000537529 SYCP1Q15431 976 aa17.6■□□□□ 0.41
MKS1-204ENST00000537529 SLFN13Q68D06 897 aa17.6■□□□□ 0.41
MKS1-204ENST00000537529 GIMAP8Q8ND71 665 aaPredicted RBP17.6■□□□□ 0.41
MKS1-204ENST00000537529 LRRC15Q8TF66 581 aa17.6■□□□□ 0.41
MKS1-204ENST00000537529 NAP1L4Q99733 375 aaKnown RBP17.6■□□□□ 0.41
MKS1-204ENST00000537529 C7orf25Q9BPX7 421 aa17.6■□□□□ 0.41
MKS1-204ENST00000537529 PDCL3Q9H2J4 239 aa17.6■□□□□ 0.41
MKS1-204ENST00000537529 EXOC1Q9NV70 894 aa17.6■□□□□ 0.41
MKS1-204ENST00000537529 LRWD1Q9UFC0 647 aa17.6■□□□□ 0.41
MKS1-204ENST00000537529 COL2A1P02458 1487 aaPredicted RBP17.6■□□□□ 0.41
MKS1-204ENST00000537529 ATRNL1Q5VV63 1379 aa17.6■□□□□ 0.41
MKS1-204ENST00000537529 PPIP5K2O43314 1243 aa17.6■□□□□ 0.41
MKS1-204ENST00000537529 SLC37A4O43826 429 aa17.6■□□□□ 0.41
MKS1-204ENST00000537529 TDP2O95551 362 aa17.6■□□□□ 0.41
MKS1-204ENST00000537529 SLURP2P0DP57 97 aa17.6■□□□□ 0.41
MKS1-204ENST00000537529 COPB1P53618 953 aaKnown RBP17.6■□□□□ 0.41
MKS1-204ENST00000537529 ICA1Q05084 483 aa17.6■□□□□ 0.41
MKS1-204ENST00000537529 UBE2SQ16763 222 aa17.6■□□□□ 0.41
MKS1-204ENST00000537529 TCP11X2Q5H9J9 407 aa17.6■□□□□ 0.41
MKS1-204ENST00000537529 PPP4R3AQ6IN85 833 aa17.6■□□□□ 0.41
MKS1-204ENST00000537529 MMTAG2Q9BU76 263 aaKnown RBP17.6■□□□□ 0.41
MKS1-204ENST00000537529 TRIM9Q9C026 710 aa17.6■□□□□ 0.41
MKS1-204ENST00000537529 PSTPIP2Q9H939 334 aa17.6■□□□□ 0.41
MKS1-204ENST00000537529 STK17AQ9UEE5 414 aa17.6■□□□□ 0.41
MKS1-204ENST00000537529 MAPK8IP1Q9UQF2 711 aa17.6■□□□□ 0.41
MKS1-204ENST00000537529 GOLGA6L9A6NEM1 432 aa17.59■□□□□ 0.41
MKS1-204ENST00000537529 LRRC10BA6NIK2 292 aa17.59■□□□□ 0.41
MKS1-204ENST00000537529 N4BP3O15049 544 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms