RNA–Protein interactions for RNA: ENST00000537403.5

SEC23A-202, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 2 BASIC

Gene SEC23A, Length 4,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-202ENST00000537403 SCG2P13521 617 aa4.53□□□□□ -1.68
SEC23A-202ENST00000537403 ERCC3P19447 782 aa4.53□□□□□ -1.68
SEC23A-202ENST00000537403 PDIA3P30101 505 aaKnown RBP4.53□□□□□ -1.68
SEC23A-202ENST00000537403 CBX1P83916 185 aa4.53□□□□□ -1.68
SEC23A-202ENST00000537403 PAK1Q13153 545 aa4.53□□□□□ -1.68
SEC23A-202ENST00000537403 HLFQ16534 295 aa4.53□□□□□ -1.68
SEC23A-202ENST00000537403 ZNF569Q5MCW4 686 aa4.53□□□□□ -1.68
SEC23A-202ENST00000537403 NOSTRINQ8IVI9 506 aa4.53□□□□□ -1.68
SEC23A-202ENST00000537403 NELFCDQ8IXH7 590 aa4.53□□□□□ -1.68
SEC23A-202ENST00000537403 SIRT2Q8IXJ6 389 aa4.53□□□□□ -1.68
SEC23A-202ENST00000537403 MYCT1Q8N699 235 aa4.53□□□□□ -1.68
SEC23A-202ENST00000537403 LSG1Q9H089 658 aaKnown RBP4.53□□□□□ -1.68
SEC23A-202ENST00000537403 AS3MTQ9HBK9 375 aa4.53□□□□□ -1.68
SEC23A-202ENST00000537403 TBC1D7Q9P0N9 293 aa4.53□□□□□ -1.68
SEC23A-202ENST00000537403 PCDHA12Q9UN75 941 aa4.53□□□□□ -1.68
SEC23A-202ENST00000537403 COMMD10Q9Y6G5 202 aa4.53□□□□□ -1.68
SEC23A-202ENST00000537403 SHTN1A0MZ66 631 aa4.52□□□□□ -1.69
SEC23A-202ENST00000537403 EXOC3O60645 756 aa4.52□□□□□ -1.69
SEC23A-202ENST00000537403 GAS7O60861 476 aa4.52□□□□□ -1.69
SEC23A-202ENST00000537403 RAD17O75943 681 aa4.52□□□□□ -1.69
SEC23A-202ENST00000537403 PCP11498 1178 aaKnown RBP4.52□□□□□ -1.69
SEC23A-202ENST00000537403 FANCCQ00597 558 aa4.52□□□□□ -1.69
SEC23A-202ENST00000537403 STRN3Q13033 797 aa4.52□□□□□ -1.69
SEC23A-202ENST00000537403 POSTNQ15063 836 aa4.52□□□□□ -1.69
SEC23A-202ENST00000537403 INF2Q27J81 1249 aa4.52□□□□□ -1.69
SEC23A-202ENST00000537403 ABCB5Q2M3G0 1257 aa4.52□□□□□ -1.69
SEC23A-202ENST00000537403 WDR44Q5JSH3 913 aa4.52□□□□□ -1.69
SEC23A-202ENST00000537403 CCDC122Q5T0U0 273 aa4.52□□□□□ -1.69
SEC23A-202ENST00000537403 CC2D2BQ6DHV5 1058 aa4.52□□□□□ -1.69
SEC23A-202ENST00000537403 ADALQ6DHV7 355 aa4.52□□□□□ -1.69
SEC23A-202ENST00000537403 CTR9Q6PD62 1173 aa4.52□□□□□ -1.69
SEC23A-202ENST00000537403 ZNF589Q86UQ0 364 aaPredicted RBP4.52□□□□□ -1.69
SEC23A-202ENST00000537403 FBXO11Q86XK2 927 aa4.52□□□□□ -1.69
SEC23A-202ENST00000537403 ZNF354CQ86Y25 554 aa4.52□□□□□ -1.69
SEC23A-202ENST00000537403 TPH2Q8IWU9 490 aa4.52□□□□□ -1.69
SEC23A-202ENST00000537403 MSANTD4Q8NCY6 345 aa4.52□□□□□ -1.69
SEC23A-202ENST00000537403 FBXO18Q8NFZ0 1043 aa4.52□□□□□ -1.69
SEC23A-202ENST00000537403 GLG1Q92896 1179 aa4.52□□□□□ -1.69
SEC23A-202ENST00000537403 PPP1R9BQ96SB3 815 aa4.52□□□□□ -1.69
SEC23A-202ENST00000537403 BAG1Q99933 345 aaPredicted RBP4.52□□□□□ -1.69
SEC23A-202ENST00000537403 ARFGAP3Q9NP61 516 aa4.52□□□□□ -1.69
SEC23A-202ENST00000537403 LMBRD1Q9NUN5 540 aa4.52□□□□□ -1.69
SEC23A-202ENST00000537403 MTMR6Q9Y217 621 aa4.52□□□□□ -1.69
SEC23A-202ENST00000537403 ATP6V0A2Q9Y487 856 aa4.52□□□□□ -1.69
SEC23A-202ENST00000537403 TMEM232C9JQI7 657 aa4.52□□□□□ -1.69
SEC23A-202ENST00000537403 SNAP23O00161 211 aa4.52□□□□□ -1.69
SEC23A-202ENST00000537403 SMAPO00193 183 aa4.52□□□□□ -1.69
SEC23A-202ENST00000537403 KIF4AO95239 1232 aa4.52□□□□□ -1.69
SEC23A-202ENST00000537403 TUBB4AP04350 444 aa4.52□□□□□ -1.69
SEC23A-202ENST00000537403 IGKV5-2P06315 115 aa4.52□□□□□ -1.69
SEC23A-202ENST00000537403 TM4SF1P30408 202 aa4.52□□□□□ -1.69
SEC23A-202ENST00000537403 KRT9P35527 623 aa4.52□□□□□ -1.69
SEC23A-202ENST00000537403 ADD2P35612 726 aa4.52□□□□□ -1.69
SEC23A-202ENST00000537403 SMC1AQ14683 1233 aaKnown RBP4.52□□□□□ -1.69
SEC23A-202ENST00000537403 BMS1Q14692 1282 aaKnown RBP4.52□□□□□ -1.69
SEC23A-202ENST00000537403 APBB1IPQ7Z5R6 666 aaPredicted RBP4.52□□□□□ -1.69
SEC23A-202ENST00000537403 FMNL3Q8IVF7 1028 aa4.52□□□□□ -1.69
SEC23A-202ENST00000537403 OSBP2Q969R2 916 aa4.52□□□□□ -1.69
SEC23A-202ENST00000537403 CSRNP1Q96S65 589 aa4.52□□□□□ -1.69
SEC23A-202ENST00000537403 ADAM33Q9BZ11 813 aa4.52□□□□□ -1.69
SEC23A-202ENST00000537403 NT5C3AQ9H0P0 336 aa4.52□□□□□ -1.69
SEC23A-202ENST00000537403 CBX8Q9HC52 389 aa4.52□□□□□ -1.69
SEC23A-202ENST00000537403 SERTAD1Q9UHV2 236 aa4.52□□□□□ -1.69
SEC23A-202ENST00000537403 SERPINB13Q9UIV8 391 aa4.52□□□□□ -1.69
SEC23A-202ENST00000537403 EXOC7Q9UPT5 735 aa4.52□□□□□ -1.69
SEC23A-202ENST00000537403 MRPL11Q9Y3B7 192 aaKnown RBP4.52□□□□□ -1.69
SEC23A-202ENST00000537403 PCDHA1Q9Y5I3 950 aa4.52□□□□□ -1.69
SEC23A-202ENST00000537403 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.52□□□□□ -1.69
SEC23A-202ENST00000537403 IKBKGQ9Y6K9 419 aa4.52□□□□□ -1.69
SEC23A-202ENST00000537403 FAM205CA6NFA0 338 aa4.52□□□□□ -1.69
SEC23A-202ENST00000537403 PRKAB2O43741 272 aa4.52□□□□□ -1.69
SEC23A-202ENST00000537403 RRP9O43818 475 aaKnown RBP4.52□□□□□ -1.69
SEC23A-202ENST00000537403 STX10O60499 249 aa4.52□□□□□ -1.69
SEC23A-202ENST00000537403 FLOT1O75955 427 aa4.52□□□□□ -1.69
SEC23A-202ENST00000537403 SLU7O95391 586 aaKnown RBP4.52□□□□□ -1.69
SEC23A-202ENST00000537403 GCNT3O95395 438 aa4.52□□□□□ -1.69
SEC23A-202ENST00000537403 KRT5P13647 590 aa4.52□□□□□ -1.69
SEC23A-202ENST00000537403 PPM1FP49593 454 aaPredicted RBP4.52□□□□□ -1.69
SEC23A-202ENST00000537403 PSEN2P49810 448 aa4.52□□□□□ -1.69
SEC23A-202ENST00000537403 TRPC3Q13507 836 aa4.52□□□□□ -1.69
SEC23A-202ENST00000537403 MCM6Q14566 821 aa4.52□□□□□ -1.69
SEC23A-202ENST00000537403 TAF12Q16514 161 aa4.52□□□□□ -1.69
SEC23A-202ENST00000537403 GNPTABQ3T906 1256 aa4.52□□□□□ -1.69
SEC23A-202ENST00000537403 PRR16Q569H4 304 aa4.52□□□□□ -1.69
SEC23A-202ENST00000537403 APOA5Q6Q788 366 aa4.52□□□□□ -1.69
SEC23A-202ENST00000537403 SYT10Q6XYQ8 523 aa4.52□□□□□ -1.69
SEC23A-202ENST00000537403 DHX37Q8IY37 1157 aaKnown RBP4.52□□□□□ -1.69
SEC23A-202ENST00000537403 ANKRD35Q8N283 1001 aa4.52□□□□□ -1.69
SEC23A-202ENST00000537403 GPKOWQ92917 476 aaPredicted RBP eCLIP4.52□□□□□ -1.699e-6■■□□□ 14.5
SEC23A-202ENST00000537403 DCPSQ96C86 337 aaKnown RBP4.52□□□□□ -1.69
SEC23A-202ENST00000537403 BEGAINQ9BUH8 593 aa4.52□□□□□ -1.69
SEC23A-202ENST00000537403 BLZF1Q9H2G9 400 aa4.52□□□□□ -1.69
SEC23A-202ENST00000537403 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.52□□□□□ -1.69
SEC23A-202ENST00000537403 V9GYY5 206 aaPredicted RBP4.52□□□□□ -1.69
SEC23A-202ENST00000537403 ZMYM6O95789 1325 aa4.52□□□□□ -1.69
SEC23A-202ENST00000537403 SYNRGQ9UMZ2 1314 aa4.52□□□□□ -1.69
SEC23A-202ENST00000537403 ZC3H4Q9UPT8 1303 aaKnown RBP4.52□□□□□ -1.69
SEC23A-202ENST00000537403 ZNF609O15014 1411 aa4.51□□□□□ -1.69
SEC23A-202ENST00000537403 CALUO43852 315 aaPredicted RBP4.51□□□□□ -1.69
SEC23A-202ENST00000537403 TNFAIP3P21580 790 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms